Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0130600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1595033:1599311:1 gene:Os02g0130600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0130600-01)
Sequence

ATGTTCCACGGCTCGCCGGCGGCGGTGGCGGCGTCGGCGGCGGTGGCGGAGATGAGGTTC
ACGACGGGGGGGTCGTCGACGCGGTCGTGGGAGCCGACGGTGACGGCGGACACGTCGGAC
CTGCACTACTGGATGCAGTGGCGCGCCGCGGTGTGCGCGCTGTCCGTGCTCGCGTGCATG
GCCGTCGCGGCGTGCCTCGTGTGGCGCCACGAGGGCCCCGGCGCCGAACGCCGCCCCGGC
GGCGCGTCCGGCGGCGGCGGCGGGAGCAAGGAGCGGCGGCGGCCGGGGGTGCTGTACGAC
GACGAGGCGTGGCGGCCATGCCTCCGGGACATCCACCCGGCGTGGCTGCTCGGCTACAGG
CTCATCTCCTTCTTCGTCCTCCTCAGCTTGCTCATCGTCATTGTCATCTCCGATGGTGGC
ACCATCTTCTACTACTACACTCAGTGGACCTTCATTCTGGTGACGATTTACTTCGGGCTC
GGCACGGCGTTGTCCATCTATGGATGCAGCAAGCTTGCTGATGAGAATGTTGTCACTGAA
AGAACAGACATGGAGCTCGGCTCGTACGTCGCCCATGGAGCTGGTACTAAACCCAATTTG
AATGGGGAAGATGACACAGGAGAGATTGCTGGATTCTGGGGTTACCTGCTCCAGATCATC
TACCAGACAAATGCAGGCGCAGTGATGCTTACAGATTGTGTGTTTTGGTTCATCATCTTC
CCATTCCTTACAGTCAAAGATTACAATCTAAATTTTTTGTTGATAGGAATGCACTCGGTA
AATGCCGTTTTCTTGCTTGGTGAAGCTGCCCTGAATAGCTTGAGCTTCCCTTGGTTCCGG
GTCGCATATTTCTTTCTCTGGACTGCTCTCTATGTCATTTTTCAATGGATTCTCCATGCA
TCAACTCCACTTTGGTGGCCATACCCATTTCTCGATGTTTCAGCTAATTTATCTCCTTTG
TGGTACTTCGCCGTCGCGATCATGCAATTACCATGCTACGCGGTATTCAGACTGGTGATC
AAACTGAAACACCACCTGCTCACAAGGTGGTTTCCGGGTTCAGTCGTAAGAGGCTCATCT
ACACCATAA

Peptide Sequence

PEP ID

Os02t0130600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1595033:1599311:1 gene:Os02g0130600 transcript:Os02t0130600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0130600-01)
Sequence

MFHGSPAAVAASAAVAEMRFTTGGSSTRSWEPTVTADTSDLHYWMQWRAAVCALSVLACM
AVAACLVWRHEGPGAERRPGGASGGGGGSKERRRPGVLYDDEAWRPCLRDIHPAWLLGYR
LISFFVLLSLLIVIVISDGGTIFYYYTQWTFILVTIYFGLGTALSIYGCSKLADENVVTE
RTDMELGSYVAHGAGTKPNLNGEDDTGEIAGFWGYLLQIIYQTNAGAVMLTDCVFWFIIF
PFLTVKDYNLNFLLIGMHSVNAVFLLGEAALNSLSFPWFRVAYFFLWTALYVIFQWILHA
STPLWWPYPFLDVSANLSPLWYFAVAIMQLPCYAVFRLVIKLKHHLLTRWFPGSVVRGSS
TP

Transcript Sequence

Transcript ID

Os02t0130600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1595033:1599311:1 gene:Os02g0130600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0130600-01)
Sequence

GGCCTCGATCGGTGGTCGAACACATGTTCCACGGCTCGCCGGCGGCGGTGGCGGCGTCGG
CGGCGGTGGCGGAGATGAGGTTCACGACGGGGGGGTCGTCGACGCGGTCGTGGGAGCCGA
CGGTGACGGCGGACACGTCGGACCTGCACTACTGGATGCAGTGGCGCGCCGCGGTGTGCG
CGCTGTCCGTGCTCGCGTGCATGGCCGTCGCGGCGTGCCTCGTGTGGCGCCACGAGGGCC
CCGGCGCCGAACGCCGCCCCGGCGGCGCGTCCGGCGGCGGCGGCGGGAGCAAGGAGCGGC
GGCGGCCGGGGGTGCTGTACGACGACGAGGCGTGGCGGCCATGCCTCCGGGACATCCACC
CGGCGTGGCTGCTCGGCTACAGGCTCATCTCCTTCTTCGTCCTCCTCAGCTTGCTCATCG
TCATTGTCATCTCCGATGGTGGCACCATCTTCTACTACTACACTCAGTGGACCTTCATTC
TGGTGACGATTTACTTCGGGCTCGGCACGGCGTTGTCCATCTATGGATGCAGCAAGCTTG
CTGATGAGAATGTTGTCACTGAAAGAACAGACATGGAGCTCGGCTCGTACGTCGCCCATG
GAGCTGGTACTAAACCCAATTTGAATGGGGAAGATGACACAGGAGAGATTGCTGGATTCT
GGGGTTACCTGCTCCAGATCATCTACCAGACAAATGCAGGCGCAGTGATGCTTACAGATT
GTGTGTTTTGGTTCATCATCTTCCCATTCCTTACAGTCAAAGATTACAATCTAAATTTTT
TGTTGATAGGAATGCACTCGGTAAATGCCGTTTTCTTGCTTGGTGAAGCTGCCCTGAATA
GCTTGAGCTTCCCTTGGTTCCGGGTCGCATATTTCTTTCTCTGGACTGCTCTCTATGTCA
TTTTTCAATGGATTCTCCATGCATCAACTCCACTTTGGTGGCCATACCCATTTCTCGATG
TTTCAGCTAATTTATCTCCTTTGTGGTACTTCGCCGTCGCGATCATGCAATTACCATGCT
ACGCGGTATTCAGACTGGTGATCAAACTGAAACACCACCTGCTCACAAGGTGGTTTCCGG
GTTCAGTCGTAAGAGGCTCATCTACACCATAAGCCAGGCCGTCATGCATCATCTTCCTCC
GCCATTGCCAACAGTTTATACAGAAAGGGCAATGGTGAAGATCACAAGAAAAGAATAATG
GCAGCCTGGTGGTGATGGACTGATGGTGGCATCGATCACCGACTCCATTTCCATTCCTCC
TTTGCGAGATTCTCTTATTGCAGCAGGTGCAACTCTCCGAGCGAAAAAAGAAAACAGGAG
AGGCACATGCGTTTTACACCACCGTATAGTAGTTCTGATAGATGTAAATTGAAGCTTACA
GGTTCAGATATGAGATTCAGAGAGTTTTTCTTTTTCTTTTTGGATGTAATGGAAACTGAA
ATGAACAGAGAGAAAAAAAAGAGTGTGGTGGGGTTATGTATAGCTTGACTCATTGACTGA
TTGGTCAAATGGAGGAGATATTTGTTAACATTTTTTTTATTTTGTAGAGCTGATTAATTA
ATGGTCATTTGTATATGTGATTAATGCTAATGAGTAATGAATGGATGCAAGTGTGTG