Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0130200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:1570152:1574900:-1 gene:Os02g0130200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os02t0130200-01)
Sequence	ATGGAGGCAGTAGGAGGAAGAAGAAGAAGGCCAAGAACAATGCTGTTCTTGGTGCTAGTA GCGTTGATGGTGATCATGGCCATGGCGAAGACGGCGAGCGGCGGCGGCGGCGATGACGGC GGCGCCGGAGGTGACCATGACCATGATCATGAGCAATTCTTGAAGCTTTGGAACGGAAGA GGCGGAGCAGATGCTAAGGAAGATTACCTGAATTGGGACGACGACGACGATGATGATGAA GATGAAGATGAAGAAGAGGAGGAGGCGGAGCAGGTGATGGCGTGGGCGGCCAAGTGCCGG CCGCCGGCGGGGAGGAACGTGGTGAACGTCGACAGCTTCGGCGCGGCGGGGGACGGCTGC TCCGACGACACGGAGGCGTTCTTGAATGCTTGGAAGAAGGCATGCTCGCTGAACAACGCG GTGTTCTTGGTCCCCGGCGGCCGCCGCTACAAGGTCGGCGCTGCCAGGTTCATCGGGCCC TGCAAGAACAGGATGATCATCCAGATCCAGGGCACTATCGTGGCGCCAGATGAGCCGTCG GAGTGGGATCCGGCGAGCCCCCGGCTGTGGCTCCTCTTCTCCGGTCTCGCCGGCGCCCGC ATCCAGGGCGGCGGTCTCATCGACGGCTCCGGCTCCAAATGGTGGGCCAACTCCTGCAAG ATTGACCGCTCCAAGCCATGCAAAGGAGCACCTACGGCTTTGACCATCGACTCGTGCAGG GGGGTGAGCGTGCGGAACCTGCGCCTGCAGAACGCGCAGCAGATGCACCTGACGGTGTCG CGCTCCCGCGACGTGCGCCTCGCCAGCGTCCGCGTCGACTCGCCGGAGGACAGCCCGAAC ACCGACGGCATCCACGTCGCCGACTCCACCGCCGTCACCATCCAGTCCTGCCGCATCGCC ACCGGCGACGACTGCATCTCCATCTCCAACGGCAGCTTCGCCGTCCGCATGCGGGACATC GACTGCGGCCCCGGCCACGGCATCAGCATCGGCAGCCTCGGCCAGGGCGGCGCGTTCGCC GCCGTCGACGGCGTGTCCCTCGACGGCGCCCGCGTCGCGCGCGCCCAGAACGGCGTCCGC ATCAAGACGTGGCAGGGCGGCGCCGGCTACGTCCGGAACGTGCGGTTCGCCGGCGTGCGC GTCGACGGCGTCGACCACCCCATCGTCATCGACCAGTTCTACTGCGACGCGACGCGGCCG TGCCGGAACCGGACGTCGAACGTGCGGGTGAGCGGCGTGGTGTTCCGGAACATCACCGGG ACGGCGAGGCGCGCGGAGGCGATCAGGCTGGCGTGCAGCGACGCCGTGCCTTGCGTCGGC ATCGTGCTCAGCGACATCGACCTGCGCCGCGAGGACGGCGGCGGCGAGGTGCAGACCGTC TGCAACTGCGCCATGGGCTTCGACGACGGCCGCGTCAGCCCCGCCGCCGACTGCCTCAGG ACCAGCCCCTGCGGCGGCATGTCGCCGGACGACTACCACCCCGACGACAAAGACGACGAC GACGAGGTCCGGCATACCGAGCTGTGA

Peptide Sequence

PEP ID	Os02t0130200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:1570152:1574900:-1 gene:Os02g0130200 transcript:Os02t0130200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os02t0130200-01)
Sequence	MEAVGGRRRRPRTMLFLVLVALMVIMAMAKTASGGGGDDGGAGGDHDHDHEQFLKLWNGR GGADAKEDYLNWDDDDDDDEDEDEEEEEAEQVMAWAAKCRPPAGRNVVNVDSFGAAGDGC SDDTEAFLNAWKKACSLNNAVFLVPGGRRYKVGAARFIGPCKNRMIIQIQGTIVAPDEPS EWDPASPRLWLLFSGLAGARIQGGGLIDGSGSKWWANSCKIDRSKPCKGAPTALTIDSCR GVSVRNLRLQNAQQMHLTVSRSRDVRLASVRVDSPEDSPNTDGIHVADSTAVTIQSCRIA TGDDCISISNGSFAVRMRDIDCGPGHGISIGSLGQGGAFAAVDGVSLDGARVARAQNGVR IKTWQGGAGYVRNVRFAGVRVDGVDHPIVIDQFYCDATRPCRNRTSNVRVSGVVFRNITG TARRAEAIRLACSDAVPCVGIVLSDIDLRREDGGGEVQTVCNCAMGFDDGRVSPAADCLR TSPCGGMSPDDYHPDDKDDDDEVRHTEL

Transcript Sequence

Transcript ID	Os02t0130200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:1570152:1574900:-1 gene:Os02g0130200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os02t0130200-01)
Sequence	AAAAAGAGCATAGAACACCACACCTCCATCTCCTGCTCCTGCTTCTTCAGTTTCTTCTTC TTCTTGTTTCCCCTATAAAATTATTTGCTACACCTCGTATTGTATCCCAAGCCAAGGAGA GCATACTACACTGTTTCTGTTATTATTGTGTGAAGTGAAACAATGGAGGCAGTAGGAGGA AGAAGAAGAAGGCCAAGAACAATGCTGTTCTTGGTGCTAGTAGCGTTGATGGTGATCATG GCCATGGCGAAGACGGCGAGCGGCGGCGGCGGCGATGACGGCGGCGCCGGAGGTGACCAT GACCATGATCATGAGCAATTCTTGAAGCTTTGGAACGGAAGAGGCGGAGCAGATGCTAAG GAAGATTACCTGAATTGGGACGACGACGACGATGATGATGAAGATGAAGATGAAGAAGAG GAGGAGGCGGAGCAGGTGATGGCGTGGGCGGCCAAGTGCCGGCCGCCGGCGGGGAGGAAC GTGGTGAACGTCGACAGCTTCGGCGCGGCGGGGGACGGCTGCTCCGACGACACGGAGGCG TTCTTGAATGCTTGGAAGAAGGCATGCTCGCTGAACAACGCGGTGTTCTTGGTCCCCGGC GGCCGCCGCTACAAGGTCGGCGCTGCCAGGTTCATCGGGCCCTGCAAGAACAGGATGATC ATCCAGATCCAGGGCACTATCGTGGCGCCAGATGAGCCGTCGGAGTGGGATCCGGCGAGC CCCCGGCTGTGGCTCCTCTTCTCCGGTCTCGCCGGCGCCCGCATCCAGGGCGGCGGTCTC ATCGACGGCTCCGGCTCCAAATGGTGGGCCAACTCCTGCAAGATTGACCGCTCCAAGCCA TGCAAAGGAGCACCTACGGCTTTGACCATCGACTCGTGCAGGGGGGTGAGCGTGCGGAAC CTGCGCCTGCAGAACGCGCAGCAGATGCACCTGACGGTGTCGCGCTCCCGCGACGTGCGC CTCGCCAGCGTCCGCGTCGACTCGCCGGAGGACAGCCCGAACACCGACGGCATCCACGTC GCCGACTCCACCGCCGTCACCATCCAGTCCTGCCGCATCGCCACCGGCGACGACTGCATC TCCATCTCCAACGGCAGCTTCGCCGTCCGCATGCGGGACATCGACTGCGGCCCCGGCCAC GGCATCAGCATCGGCAGCCTCGGCCAGGGCGGCGCGTTCGCCGCCGTCGACGGCGTGTCC CTCGACGGCGCCCGCGTCGCGCGCGCCCAGAACGGCGTCCGCATCAAGACGTGGCAGGGC GGCGCCGGCTACGTCCGGAACGTGCGGTTCGCCGGCGTGCGCGTCGACGGCGTCGACCAC CCCATCGTCATCGACCAGTTCTACTGCGACGCGACGCGGCCGTGCCGGAACCGGACGTCG AACGTGCGGGTGAGCGGCGTGGTGTTCCGGAACATCACCGGGACGGCGAGGCGCGCGGAG GCGATCAGGCTGGCGTGCAGCGACGCCGTGCCTTGCGTCGGCATCGTGCTCAGCGACATC GACCTGCGCCGCGAGGACGGCGGCGGCGAGGTGCAGACCGTCTGCAACTGCGCCATGGGC TTCGACGACGGCCGCGTCAGCCCCGCCGCCGACTGCCTCAGGACCAGCCCCTGCGGCGGC ATGTCGCCGGACGACTACCACCCCGACGACAAAGACGACGACGACGAGGTCCGGCATACC GAGCTGTGAACTGAACTGAACTCTCATGCGTGAATGCTAAGATCGATCGGCTTAAGCTCA ATGAAGCCCTTTTGACCCTGCTATTAATTACAGTAGTAGTAATTAATTAATTATAATTAA TTAATCCTACTGGTGCTTTCCTTTTTGTTACAGTGTGCTTTGTAAATTAAATGTCACAGT ATTATATACTCACTCCGTTTCACAATGTAAGGTATTCTAGTATTTCTAATATATTGATGT TAATGAATCTAG