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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0130100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1566154:1569479:-1 gene:Os02g0130100 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNO glutamine amidotransferase family protein. (Os02t0130100-01)
Sequence

ATGGCGGTCGTCGGCGTCCTCGCGCTGCAGGGCTCCTTCAACGAGCACTTGGCCGCGCTG
AGGAGGATCGGGGTGAGGGGGGTGGAGGTGCGGAAGCCGGAGCAGCTGCAGGGGCTCGAC
TCGCTCATCATCCCCGGCGGCGAGAGCACCACCATGGCCAAACTCGCCAACTACCACAAC
CTGTTTCCTGCACTTCGAGAATTTGTTGGTACAGGAAGGCCTGTCTGGGGAACTTGTGCT
GGACTCATCTTCCTAGCTAACAAGGCAGTAGGCCAAAAATCCGGAGGTCAGGAGCTTATT
GGAGGACTAGATTGTACTGTCCACCGGAACTTTTTTGGGAGCCAGCTTCAAAGCTTTGAA
ACGGAACTTTCAGTGCCAATGCTTGCAGAGAAGGAAGGAGGGAGCGATACATGCCGTGGC
GTATTTATACGAGCACCTGCTATCTTGGATGTAGGTTCAAATGTTGAAGTACTGGCGGAT
TGTCCTGTTCCATCGGATAGACCCAGTATTACAATAGCGTCTGGAGAGGGTGTTGAGGAA
GAAGTGTACTCGAAAGATCGGGTAATTGTTGCTGTAAGGCAAGGGAACATCCTCGCTACT
GCTTTTCACCCAGAATTGACATCAGACTCTAGATGGCATCGGTTCTTCCTGGACATGGAT
AAAGAATCTGATACAAAAGCCTTCTCTGCTCTCTCTCTCTCATCATCTTCAAGAGACACT
CAAGATGGGTCAAAGAATAAGCCTCTTGATCTACCCATCTTCGAGTAG

Peptide Sequence

PEP ID

Os02t0130100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1566154:1569479:-1 gene:Os02g0130100 transcript:Os02t0130100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNO glutamine amidotransferase family protein. (Os02t0130100-01)
Sequence

MAVVGVLALQGSFNEHLAALRRIGVRGVEVRKPEQLQGLDSLIIPGGESTTMAKLANYHN
LFPALREFVGTGRPVWGTCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQLQSFE
TELSVPMLAEKEGGSDTCRGVFIRAPAILDVGSNVEVLADCPVPSDRPSITIASGEGVEE
EVYSKDRVIVAVRQGNILATAFHPELTSDSRWHRFFLDMDKESDTKAFSALSLSSSSRDT
QDGSKNKPLDLPIFE

Transcript Sequence

Transcript ID

Os02t0130100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1566154:1569479:-1 gene:Os02g0130100 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNO glutamine amidotransferase family protein. (Os02t0130100-01)
Sequence

GAGAAGAGGAGGGGAGCAGCAGCAGCAGCAGCAGCAATGGCGGTCGTCGGCGTCCTCGCG
CTGCAGGGCTCCTTCAACGAGCACTTGGCCGCGCTGAGGAGGATCGGGGTGAGGGGGGTG
GAGGTGCGGAAGCCGGAGCAGCTGCAGGGGCTCGACTCGCTCATCATCCCCGGCGGCGAG
AGCACCACCATGGCCAAACTCGCCAACTACCACAACCTGTTTCCTGCACTTCGAGAATTT
GTTGGTACAGGAAGGCCTGTCTGGGGAACTTGTGCTGGACTCATCTTCCTAGCTAACAAG
GCAGTAGGCCAAAAATCCGGAGGTCAGGAGCTTATTGGAGGACTAGATTGTACTGTCCAC
CGGAACTTTTTTGGGAGCCAGCTTCAAAGCTTTGAAACGGAACTTTCAGTGCCAATGCTT
GCAGAGAAGGAAGGAGGGAGCGATACATGCCGTGGCGTATTTATACGAGCACCTGCTATC
TTGGATGTAGGTTCAAATGTTGAAGTACTGGCGGATTGTCCTGTTCCATCGGATAGACCC
AGTATTACAATAGCGTCTGGAGAGGGTGTTGAGGAAGAAGTGTACTCGAAAGATCGGGTA
ATTGTTGCTGTAAGGCAAGGGAACATCCTCGCTACTGCTTTTCACCCAGAATTGACATCA
GACTCTAGATGGCATCGGTTCTTCCTGGACATGGATAAAGAATCTGATACAAAAGCCTTC
TCTGCTCTCTCTCTCTCATCATCTTCAAGAGACACTCAAGATGGGTCAAAGAATAAGCCT
CTTGATCTACCCATCTTCGAGTAGCTCATGAAAGAAAAGAAAGACTGTTAAACATTGAAG
AACAGAAGATGAAGAAGCTAACAAAATTTTGAGCATTCAGTTGGTGACAATAGAGAAAGT
TGAGTACGTGTGATGCTCAGTCCAAATGTGTTATTGTTGTCAAACTGTACCAATCAAAAT
AATGATAATGCCGTCCCAAACATTGTGATTTTGCTACGACAAAGAATCTGATTCAGTTGA
ATATATGTCACAATTTTTTTTCTTCC