Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0127700-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:1437441:1441125:-1 gene:Os02g0127700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-phosphate pyrophosphokinase. (Os02t0127700-01);Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1). (Os02t0127700-02)
Sequence

ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGC
CGCGGCCTCCTCCGCCGACCGCCGCGCTCTTCCCCCGTCGTCGTGAGGTGCAAGAAGATT
GATCAACTGAGGGCAGTCAATGGAATACCACCATACGCTCCAGTGTCTAACAGATCGTTG
TTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGGTTG
CGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGC
TTAGAACTTGGGAAGATTAACATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTA
CAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAACCAACGTGCCCTCCTGCAAAT
GAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAAT
ATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGT
GAATCTATAGCTGCAAAACTTGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTC
CTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACTTTGACATCCCAGTAGATCAT
GTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGATGAC
CTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAG
CTATCAGATGCACCTCTAGCAATTGTTGATAAAAGAAGGCATGGACACAATGTTGCCGAG
GTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGGATGATATGATT
GATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAA
GTCTATGCATGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGAAAGGTTATCAAGT
GGTTTGTTTCAAGAAGTAATCATCACAAACACTATACCTCTCAAGGAGGACAAGAGTTTC
CCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAATCTGGCGTGTTCAT
GATGATTGCTCAGTTGGTCATGAGCCATACTCTAGCTTGGACATTGACTGA

Peptide Sequence

PEP ID

Os02t0127700-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:1437441:1441125:-1 gene:Os02g0127700 transcript:Os02t0127700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-phosphate pyrophosphokinase. (Os02t0127700-01);Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1). (Os02t0127700-02)
Sequence

MPLSYSAAAAAAPSPLAARSRGLLRRPPRSSPVVVRCKKIDQLRAVNGIPPYAPVSNRSL
LSPVTLPIIRDANIKNDTRLRIFSGTANPSLSQEIASYLGLELGKINIKRFADGEIYVQL
QESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKSQGR
ESIAAKLVANMITEAGANRVLVCDLHSSQAMGYFDIPVDHVYGQPVILDYLASKTICSDD
LVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMMDDMI
DTAGTIAKGAELLHQEGAREVYACCTHAVFSPPAIERLSSGLFQEVIITNTIPLKEDKSF
PQLTILSVANLLGETIWRVHDDCSVGHEPYSSLDID

Transcript Sequence

Transcript ID

Os02t0127700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1437441:1441125:-1 gene:Os02g0127700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-phosphate pyrophosphokinase. (Os02t0127700-01);Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1). (Os02t0127700-02)
Sequence

CCCGCGTCCCCCGATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCT
CGCCGCGCGCAGCCGCGGCCTCCTCCGCCGACCGCCGCGCTCTTCCCCCGTCGTCGTGAG
GTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGAATACCACCATACGCTCCAGTGTC
TAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAA
TGATACAAGGTTGCGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGC
AAGTTACTTGGGCTTAGAACTTGGGAAGATTAACATAAAAAGGTTTGCTGATGGCGAAAT
ATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAACCAACGTG
CCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGC
ATCTGCTAAGAATATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAA
GTCTCAAGGCCGTGAATCTATAGCTGCAAAACTTGTAGCTAATATGATTACAGAAGCTGG
TGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACTTTGACAT
CCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAAT
ATGTTCAGATGACCTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGC
TTTTGCCAAAAAGCTATCAGATGCACCTCTAGCAATTGTTGATAAAAGAAGGCATGGACA
CAATGTTGCCGAGGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGAT
GGATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGA
AGGAGCAAGAGAAGTCTATGCATGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGA
AAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCACAAACACTATACCTCTCAAGGA
GGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAAT
CTGGCGTGTTCATGATGATTGCTCAGTTGGTCATGAGCCATACTCTAGCTTGGACATTGA
CTGAAGCTCAAGGTGTATCACGCCCAATCCCCAATTTTTGGCTTTTCTCCACCTTTGGTT
TCGTGGAATAAGCTGTGTAATCTGATGCTCCTACTAGTGCAAGAACTTTTGAGTATTTCA
ATGAACCATAGTACATAAGATCGAAATTTAGGTAGTTTGGTTTGCTAGCATGCTCAGTGT
AATGTACATATTGTTTCCACGTGATCCATTTATTTCTTTGCAAAGATCAATGCTGAATGG
TTCAATTT