Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0127600-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:1433094:1436127:1 gene:Os02g0127600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0127600-00)
Sequence	ATGGATGCGACGCGTGTTAGTCGAGTAGCCGAGTCCGACCCAAAAACACTCACTCGGCCC ACATCACGCCACCACCCCGACCCAACCCAAACTTCTTTTCCACGCCGCCGCCGCCGCCGC CGCCGCCCCACGCCCGATGCCACCCGCCGCCGCCGGCTGCCACCGCTGCCGGCGGCTTCC TCCCCACCGCCGTTGACCTCCCCCCACGCCCTCGCCATGCCCCGCCTCCCCCTCCTCCCC TCCCGCTCCCCCCGCCGCCGCCCCCTCCTCCTCGCCATTCTCTCGAACACCTTCTCCGCG TCCACCCGCGCCCCTCCCCCGCCTCTCCCCCCGCTCTCCCCGCTTCTCCCGCGCCGAGCC GACGCCGCCACCGCCCTCACCCCCGTCGCCTCCGCCATCGCCGACTCCTTCCGCGACTGG TTCCTCCTGTCCCGCCGCGGGGCCGCGGGGGCCGCCGCGCCGCCCGCGGCGCTCGACGCG ATCTACAGCGCCGTCGCGGCCGAGGAGGCCGCGGCGCTCGACGCGCTCCCGCTCTCCGAG CAGCTCGTGCTGGCCGTGCTCCGCCACCGCCCGCGCCACCTCCCCGACGACGACGCGCTG CTGCTGCTCCGCCTCAGGTTCTTCGACTGGTCGGGGAGCCGCGGGCGGTACTCCCACACG CGCGCCGTGTACCACTCCGTCTTCCGCCTCCTCTCCCGCTCCCGCCGCTCCGCCGTGGTG GTGGACTGGCTCCGCCTCTTCTCCAACGCCAACGCGACCCCCGCCAGGTCGCGCTTCCAC GACACGCTCGTCGTCGGCTACGCCGTCGCCGGCGATCCCCAGCGCGGGCTCAGCATCCTC GGTCGCATGCGATTCCGCGGCCTCGACCTCGACGCCTTCTCCTCCCACATCCTCCTCAAT TCCCTCGTCGAGGCGTCGCTCCATGAGTATGCTGATTCCTTCGCTCGCCACCTTGCTGCA AGTCCTGTGGCGACCTGCATTCGCATCAAGAGCCTCTGCCGCCAAGCCCGCAGCAGAGAT GCCGTGGCTCTCCTGGACACCCTCCCTTTCGACCAAGCATCCAGTGCCCCTGCAGCTGGC TCGATCATCACAGACTTGTGCCGCCGTGGGCGCTTTGATGATGCAGCTCAGATTGTTGAC AGGTTCCCCTCCGCTGATGTGTATGGCTCATGGATTCATGGCCTCGTCGAGGCCGGGAGA CTCGACACTACGTTGCAGTTCCTTTCTGAGAAGAAAGAAGCCGAGGGGTATATTCCTGAT GGACCTCGGTATGACAAGCTTACGTATCGCTTGCTTCGCAGTAACAGGCTCGGTGAGGTG TATGACTTGCTTGTGGAAATGATGGAGGAGGGCATTGCTCCAGGCCGTTCAACCATGAAT GCCGCGCTTTGCTTCTTTTGCAAGGCTGGGCTCGTGGAAGTTGCGGCACACTTGTATCGG TCAAGGATGGAGCTTGGGGTTAACCCTAACAAGGATGTGTACAACAATTTGATCAGGGCT CTTTGTCGGGTTGGGGACACAGAAGAGGCGTGCCTGGTGTTGGAGCAGGCTATGGCAGAA GGGTACTTCCCTGGGCGACAGACATTTACCATGTTTGCAAATGTGTTGTGTCAGGAGGGG AAGCTAGATAGGGTGCGAGTGCTCCTTGACAGAGCACTCAAGCAGGAGGCATGCCCAACG GACAGTGTCTTGGCCAAGTACCTTGTGGCATTGTGCAAGAGTGGGGATGTGGAGGCAGCA TGTGCAGTGCCTCAGATGGCAGGCAGCAAAAGTCCTAAGGGCTTATATCGCTACGAATCA ACTTACAAGAGCTTGATTCGGGCATTGATATTGATCAGGAGGGTGGATGTACTGCCAAGG CTCTTACTGGAAATGCAAGACATGGGGCACATCCCGAGCCGAAGCCTCTATCAGTCGGTT GTTTGTGCTTTGTGTGAGGTGAGCAGGTATGCTGAGGTTCTGGAGCTGCTGAACAACCAG CTGCAACGGACTGACCTACACCCCCGTGTATGCTACAACTACTTCATCGCTGGGGCTGGG CATGCTAAGAAGGCTGACATGGCCAGGGAGGTATATAACCAAATGGAGTATTCTGGGCTT GAACCATCAGGAGACAGCAATGTCCTTCTTCTTATGAGTTATCTGAGGAGTAAGCGTATT GGCGATGCACTAAACTTCTTCAACTTCATTCGTGACAAGAAGACACCTGGCACCAAGCTG TACAATGTATTCATATCTGGTCTATGTGAAGCTCAGAAGCCAGAGCAGGCAATGGTGTTC TGGAGGGAAGCGAGGGAGAAGGGTTTAGTCCCAAGCATCAGCTGCTATGAACAGCTTGTG CTCCTGTTGTGCTCTGTGAAAGATTATGACAATGTCGTAAAGGTTATTGATGACTTCAAA GAAACAGGTCGCCCTGTTTCGGCTTTCTTGTGTAACGTGCTTCTGTTGCACACATTGAGG GGCAGTGACCTTCTGAAGGCTTGGAAACGTTCAGAGCAGGCAACAGTGAAACCAGAAGAG ATCCAGGGTAAGGGGGTAGGACGGTTCTTGATTGGCGAACTTATTATGATGTTTGCAGGT GGTATTAGGAACATGAATGACTTAGAGGATTTAGAAGAGGACCTAGAAAAACATTTTCCA GTTGATGTTTACACTTATAACATGCTGCTGCGAGGGTTGAGCATGGTGGGGAGGATGGAC TCTGCCTGTAACTTGTTTGAGAGGCTGTGCCGCAAGGGGTATGAACCGAATCGGTGGACT TTTGATATAATGGTACATGGCTTCTGCAAGAATAGTGACAGGGATGAGGCCGAGAGATGG ATGGAAGCAATGCACCGAAATGGGTTCTATCCCACATGGTACACTATGAGGATATATAAC AATTTAGCGTTGCGATCAACTGATCATAAAGTCATCTCATTTGTATAA

Peptide Sequence

PEP ID	Os02t0127600-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:1433094:1436127:1 gene:Os02g0127600 transcript:Os02t0127600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0127600-00)
Sequence	MDATRVSRVAESDPKTLTRPTSRHHPDPTQTSFPRRRRRRRRPTPDATRRRRLPPLPAAS SPPPLTSPHALAMPRLPLLPSRSPRRRPLLLAILSNTFSASTRAPPPPLPPLSPLLPRRA DAATALTPVASAIADSFRDWFLLSRRGAAGAAAPPAALDAIYSAVAAEEAAALDALPLSE QLVLAVLRHRPRHLPDDDALLLLRLRFFDWSGSRGRYSHTRAVYHSVFRLLSRSRRSAVV VDWLRLFSNANATPARSRFHDTLVVGYAVAGDPQRGLSILGRMRFRGLDLDAFSSHILLN SLVEASLHEYADSFARHLAASPVATCIRIKSLCRQARSRDAVALLDTLPFDQASSAPAAG SIITDLCRRGRFDDAAQIVDRFPSADVYGSWIHGLVEAGRLDTTLQFLSEKKEAEGYIPD GPRYDKLTYRLLRSNRLGEVYDLLVEMMEEGIAPGRSTMNAALCFFCKAGLVEVAAHLYR SRMELGVNPNKDVYNNLIRALCRVGDTEEACLVLEQAMAEGYFPGRQTFTMFANVLCQEG KLDRVRVLLDRALKQEACPTDSVLAKYLVALCKSGDVEAACAVPQMAGSKSPKGLYRYES TYKSLIRALILIRRVDVLPRLLLEMQDMGHIPSRSLYQSVVCALCEVSRYAEVLELLNNQ LQRTDLHPRVCYNYFIAGAGHAKKADMAREVYNQMEYSGLEPSGDSNVLLLMSYLRSKRI GDALNFFNFIRDKKTPGTKLYNVFISGLCEAQKPEQAMVFWREAREKGLVPSISCYEQLV LLLCSVKDYDNVVKVIDDFKETGRPVSAFLCNVLLLHTLRGSDLLKAWKRSEQATVKPEE IQGKGVGRFLIGELIMMFAGGIRNMNDLEDLEEDLEKHFPVDVYTYNMLLRGLSMVGRMD SACNLFERLCRKGYEPNRWTFDIMVHGFCKNSDRDEAERWMEAMHRNGFYPTWYTMRIYN NLALRSTDHKVISFV

Transcript Sequence

Transcript ID	Os02t0127600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:1433094:1436127:1 gene:Os02g0127600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0127600-00)
Sequence	ATGGATGCGACGCGTGTTAGTCGAGTAGCCGAGTCCGACCCAAAAACACTCACTCGGCCC ACATCACGCCACCACCCCGACCCAACCCAAACTTCTTTTCCACGCCGCCGCCGCCGCCGC CGCCGCCCCACGCCCGATGCCACCCGCCGCCGCCGGCTGCCACCGCTGCCGGCGGCTTCC TCCCCACCGCCGTTGACCTCCCCCCACGCCCTCGCCATGCCCCGCCTCCCCCTCCTCCCC TCCCGCTCCCCCCGCCGCCGCCCCCTCCTCCTCGCCATTCTCTCGAACACCTTCTCCGCG TCCACCCGCGCCCCTCCCCCGCCTCTCCCCCCGCTCTCCCCGCTTCTCCCGCGCCGAGCC GACGCCGCCACCGCCCTCACCCCCGTCGCCTCCGCCATCGCCGACTCCTTCCGCGACTGG TTCCTCCTGTCCCGCCGCGGGGCCGCGGGGGCCGCCGCGCCGCCCGCGGCGCTCGACGCG ATCTACAGCGCCGTCGCGGCCGAGGAGGCCGCGGCGCTCGACGCGCTCCCGCTCTCCGAG CAGCTCGTGCTGGCCGTGCTCCGCCACCGCCCGCGCCACCTCCCCGACGACGACGCGCTG CTGCTGCTCCGCCTCAGGTTCTTCGACTGGTCGGGGAGCCGCGGGCGGTACTCCCACACG CGCGCCGTGTACCACTCCGTCTTCCGCCTCCTCTCCCGCTCCCGCCGCTCCGCCGTGGTG GTGGACTGGCTCCGCCTCTTCTCCAACGCCAACGCGACCCCCGCCAGGTCGCGCTTCCAC GACACGCTCGTCGTCGGCTACGCCGTCGCCGGCGATCCCCAGCGCGGGCTCAGCATCCTC GGTCGCATGCGATTCCGCGGCCTCGACCTCGACGCCTTCTCCTCCCACATCCTCCTCAAT TCCCTCGTCGAGGCGTCGCTCCATGAGTATGCTGATTCCTTCGCTCGCCACCTTGCTGCA AGTCCTGTGGCGACCTGCATTCGCATCAAGAGCCTCTGCCGCCAAGCCCGCAGCAGAGAT GCCGTGGCTCTCCTGGACACCCTCCCTTTCGACCAAGCATCCAGTGCCCCTGCAGCTGGC TCGATCATCACAGACTTGTGCCGCCGTGGGCGCTTTGATGATGCAGCTCAGATTGTTGAC AGGTTCCCCTCCGCTGATGTGTATGGCTCATGGATTCATGGCCTCGTCGAGGCCGGGAGA CTCGACACTACGTTGCAGTTCCTTTCTGAGAAGAAAGAAGCCGAGGGGTATATTCCTGAT GGACCTCGGTATGACAAGCTTACGTATCGCTTGCTTCGCAGTAACAGGCTCGGTGAGGTG TATGACTTGCTTGTGGAAATGATGGAGGAGGGCATTGCTCCAGGCCGTTCAACCATGAAT GCCGCGCTTTGCTTCTTTTGCAAGGCTGGGCTCGTGGAAGTTGCGGCACACTTGTATCGG TCAAGGATGGAGCTTGGGGTTAACCCTAACAAGGATGTGTACAACAATTTGATCAGGGCT CTTTGTCGGGTTGGGGACACAGAAGAGGCGTGCCTGGTGTTGGAGCAGGCTATGGCAGAA GGGTACTTCCCTGGGCGACAGACATTTACCATGTTTGCAAATGTGTTGTGTCAGGAGGGG AAGCTAGATAGGGTGCGAGTGCTCCTTGACAGAGCACTCAAGCAGGAGGCATGCCCAACG GACAGTGTCTTGGCCAAGTACCTTGTGGCATTGTGCAAGAGTGGGGATGTGGAGGCAGCA TGTGCAGTGCCTCAGATGGCAGGCAGCAAAAGTCCTAAGGGCTTATATCGCTACGAATCA ACTTACAAGAGCTTGATTCGGGCATTGATATTGATCAGGAGGGTGGATGTACTGCCAAGG CTCTTACTGGAAATGCAAGACATGGGGCACATCCCGAGCCGAAGCCTCTATCAGTCGGTT GTTTGTGCTTTGTGTGAGGTGAGCAGGTATGCTGAGGTTCTGGAGCTGCTGAACAACCAG CTGCAACGGACTGACCTACACCCCCGTGTATGCTACAACTACTTCATCGCTGGGGCTGGG CATGCTAAGAAGGCTGACATGGCCAGGGAGGTATATAACCAAATGGAGTATTCTGGGCTT GAACCATCAGGAGACAGCAATGTCCTTCTTCTTATGAGTTATCTGAGGAGTAAGCGTATT GGCGATGCACTAAACTTCTTCAACTTCATTCGTGACAAGAAGACACCTGGCACCAAGCTG TACAATGTATTCATATCTGGTCTATGTGAAGCTCAGAAGCCAGAGCAGGCAATGGTGTTC TGGAGGGAAGCGAGGGAGAAGGGTTTAGTCCCAAGCATCAGCTGCTATGAACAGCTTGTG CTCCTGTTGTGCTCTGTGAAAGATTATGACAATGTCGTAAAGGTTATTGATGACTTCAAA GAAACAGGTCGCCCTGTTTCGGCTTTCTTGTGTAACGTGCTTCTGTTGCACACATTGAGG GGCAGTGACCTTCTGAAGGCTTGGAAACGTTCAGAGCAGGCAACAGTGAAACCAGAAGAG ATCCAGGGTAAGGGGGTAGGACGGTTCTTGATTGGCGAACTTATTATGATGTTTGCAGGT GGTATTAGGAACATGAATGACTTAGAGGATTTAGAAGAGGACCTAGAAAAACATTTTCCA GTTGATGTTTACACTTATAACATGCTGCTGCGAGGGTTGAGCATGGTGGGGAGGATGGAC TCTGCCTGTAACTTGTTTGAGAGGCTGTGCCGCAAGGGGTATGAACCGAATCGGTGGACT TTTGATATAATGGTACATGGCTTCTGCAAGAATAGTGACAGGGATGAGGCCGAGAGATGG ATGGAAGCAATGCACCGAAATGGGTTCTATCCCACATGGTACACTATGAGGATATATAAC AATTTAGCGTTGCGATCAACTGATCATAAAGTCATCTCATTTGTATAAGTAATCATCTCT CTGCCACCGCTTTCATGCCTTGGTCTGCTGTGATCCTATGACTTCACTGGAACAGGTAAA ACTATTATCAGAACCTTGTTCTATGGTTTTAGTT