Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0125800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1347163:1351333:-1 gene:Os02g0125800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor Tfb4 family protein. (Os02t0125800-01)
Sequence

ATGGCCTCCTCCAAGCTCTACTCCGATGACGTCAGCCTCGCCGTCGTCGTCGTCGACACC
AACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCTTCGCCGACTTCTTCGCCCATCTGATC
CACTACGTGAACTCGCTCTTGCTTCTGAACCACCTCAACCATGTGGTCGTCATCGCCGCG
GGGCTTAGCTCTTGCACCTACATCTTCGACTCGAGCGATGCTAGTGCCTCTGGTGCTGCA
GACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCAAGATGGATGAGTTCATTGCAGAAGAC
GCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTGATGGCAATGCAGCCTCTCTTCTCTCA
GGCGCACTGTCCCTTGCTCTGTGCTATATACAGAGGGTTTTTCGGTCTGGTACTCGACAT
CCACAACCTCGGATTTTATGCCTGCAGGGTTCTCCAGATGGACCTGAACAATATGTAGCG
GTCATGAACTCAATATTTTCTGCTCAACGTTCCATGGTCCCAATCGATTCATGCATAGTA
GGAACCCAAGACTCTGCTTTCTTGCAACAGGCTTCATATATAACAGGTGGAGTTTATTTG
AAACCCCAAGAACTAAATGGTCTATTTCAATACCTTGCTGCTGTATTTGCAACTGATTTA
CACTCAAGAACCTTTCTGCGCCTCCCCAAGACTCTGGGAGTGGATTTCCGTGCTTCATGT
TTCTGCCATAAGAAGACTATTGACATGGGATATGTTTGTTCAGTTTGTTTATCGATATTC
TGCAAGTATCATAAGAAGTGTTCGACCTGTGGGTCAGAATTCAACCGTGTCATGCCCGAC
TTAAATTCTGTACCTGATCAAAGGCAGTAG

Peptide Sequence

PEP ID

Os02t0125800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1347163:1351333:-1 gene:Os02g0125800 transcript:Os02t0125800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor Tfb4 family protein. (Os02t0125800-01)
Sequence

MASSKLYSDDVSLAVVVVDTNPLFWATAALPFADFFAHLIHYVNSLLLLNHLNHVVVIAA
GLSSCTYIFDSSDASASGAADVAATFAKASRKMDEFIAEDARATSSNGSVADGNAASLLS
GALSLALCYIQRVFRSGTRHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRSMVPIDSCIV
GTQDSAFLQQASYITGGVYLKPQELNGLFQYLAAVFATDLHSRTFLRLPKTLGVDFRASC
FCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSEFNRVMPDLNSVPDQRQ

Transcript Sequence

Transcript ID

Os02t0125800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1347163:1351333:-1 gene:Os02g0125800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor Tfb4 family protein. (Os02t0125800-01)
Sequence

GCGCAGCCGCAACTCCGCCGAGTTCGCCGCCTCCGCCTCCGCCTCCCGACGGCGGCAAGG
CAACCGCTCGCGCCGCCGCCGCCTCGGCCCAACCAGCGCCTCCGTTCGCGCGTGTCCGGC
CCTGCCGCGACGGCGGTGAGACTGCCATGGCCTCCTCCAAGCTCTACTCCGATGACGTCA
GCCTCGCCGTCGTCGTCGTCGACACCAACCCCTTGTTCTGGGCCACCGCCGCCCTCCCCT
TCGCCGACTTCTTCGCCCATCTGATCCACTACGTGAACTCGCTCTTGCTTCTGAACCACC
TCAACCATGTGGTCGTCATCGCCGCGGGGCTTAGCTCTTGCACCTACATCTTCGACTCGA
GCGATGCTAGTGCCTCTGGTGCTGCAGACGTCGCGGCCACCTTCGCAAAGGCGAGCCGCA
AGATGGATGAGTTCATTGCAGAAGACGCCCGTGCCACTAGCAGCAATGGTTCCGTTGCTG
ATGGCAATGCAGCCTCTCTTCTCTCAGGCGCACTGTCCCTTGCTCTGTGCTATATACAGA
GGGTTTTTCGGTCTGGTACTCGACATCCACAACCTCGGATTTTATGCCTGCAGGGTTCTC
CAGATGGACCTGAACAATATGTAGCGGTCATGAACTCAATATTTTCTGCTCAACGTTCCA
TGGTCCCAATCGATTCATGCATAGTAGGAACCCAAGACTCTGCTTTCTTGCAACAGGCTT
CATATATAACAGGTGGAGTTTATTTGAAACCCCAAGAACTAAATGGTCTATTTCAATACC
TTGCTGCTGTATTTGCAACTGATTTACACTCAAGAACCTTTCTGCGCCTCCCCAAGACTC
TGGGAGTGGATTTCCGTGCTTCATGTTTCTGCCATAAGAAGACTATTGACATGGGATATG
TTTGTTCAGTTTGTTTATCGATATTCTGCAAGTATCATAAGAAGTGTTCGACCTGTGGGT
CAGAATTCAACCGTGTCATGCCCGACTTAAATTCTGTACCTGATCAAAGGCAGTAGTCTA
CACTACAGATGGCGAAATATCAGACTGCAGACTTCTCTTTATGTTCTCCACAGGTTCAAC
TGATACAGAATGGGCATTGTGTGCATACTTGAAGCAGCGTCAGTTTAGCAAAAACTAGGC
AACTGGGCGTAGCAATTTTGTCAACTGATGAGGGAACTCACGCCCGACTTTTGGAATTAG
TTTGCCTGCAATTTGTAAAGTTGGCACATGAACTTGTGATGCACCATTTGCAAATGCTCT
TTTTTGCTTACCGAAAACAGGACAACAGGTCAAGCTAGTAGATGGCAAATCATTTTTCTT
GTCATGGTGACACAGGTTGCGCTAATGTCTTGATATATTACTTCGAGCTCC