Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0125700-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1344678:1347023:1 gene:Os02g0125700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lil3 protein. (Os02t0125700-01)
Sequence

ATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCACCCGCCGC
CGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTC
CGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGC
AAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAG
CCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAAC
GGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATA
GACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGAC
GAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCAT
CTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATAC
TTTGTTGATAGCTTGACCGGCGTGGGGCTTGTCGACCAGATGGGCAACTTCTTCTGCAAA
ACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAG
ACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG
CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAG

Peptide Sequence

PEP ID

Os02t0125700-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1344678:1347023:1 gene:Os02g0125700 transcript:Os02t0125700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lil3 protein. (Os02t0125700-01)
Sequence

MAMATSTFSPPASQLSLTRRRLHPGPDLLTLSSPRLRAGLRLARAAAGEAPVETVEAPPS
KPEAEPSPAASNGAAVKAEKPPAAAAAPPLPKFRDSRWVNGTWDLRQFEKGGAVDWDAVI
DAEARRRKWLEDCPEATSPDEAVVFDTSIIPWWAWMKRFHLPEAEKLNGRAAMIGFFMAY
FVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLLVRKNEDIETVKKLIDETTFYDKQWQATW
QDESPSQPKK

Transcript Sequence

Transcript ID

Os02t0125700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1344678:1347023:1 gene:Os02g0125700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lil3 protein. (Os02t0125700-01)
Sequence

ATTTCCGCCTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGAC
AAGGGAAGCCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCC
TCACCCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCC
GCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGG
CGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCA
AGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGA
GGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGG
ACGCCGTCATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAA
CTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGA
AGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCT
TCATGGCATACTTTGTTGATAGCTTGACCGGCGTGGGGCTTGTCGACCAGATGGGCAACT
TCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACG
AGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGC
AGGCAACCTGGCAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCT
GAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACC
CATTTATTAGTGAGGCTCAGTACATTTTGATGATCTTAATACCTATGACGTCTTGTAAAA
AGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTACTTGGTTGAATGTT
TTCTTTGTGAGAATTGCTTGTACTAGTTACTCCCTCCGCTTCATATTATAAAATGCTTTG
ACTCTTTTCTAAATC