Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0125200-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:1313881:1318611:1 gene:Os02g0125200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding protein. (Os02t0125200-00)
Sequence

GAGTTGTTGTCATGGAGCCCGCGACGGAGACCACGGCGACTTCGCCGGCTGCGGCTGCCG
CTGCGCAGCCGGAGGCGGAGGCGGAGGCGGAGGCGGAGTCGGCGGCGACGCCGGTGGCAG
TGGCGGCGGCGGCGGCGGCAACCTATCAGCCGCCAGCGCCGGTGGTTCCAGTCGCCGTGG
CAGGTGCGGCGGCGGGGAGAGGGAACGGGAAGAGGAAGAGGGGGAGGCCGAGGAAGTACG
GGCCGGTACACGCCGGCGGCGGCGGTGGGGGCCGTCATGAAGCGCGGCAGGGGCCGCCCC
GTCGGGTTCGTCAGCCGCGCGTCGCCGGTGTCCGTGGCCGTGACGGCCGCCACGTCCACC
GCCGCGGTGGTCGTCTCGTCTCCGGCCACCCACACCCAGACGCCGCTCGGGCCGCTAGGT
GAATTGGTAGCATGTGCTTCTGGTGCAAACTTCACACCTCATATCATTAACGTTGCTGCT
GGCGAGGATGTTAATATGAAGGTCATATCTTTCTCCCAACAAGGTCCAAGGGCAATTTGC
ATTCTGTCTGCTAATGGGGTGATTTCAAATGTTACATTGCGTCAGCAAGATACTTTAGGT
GGTACAGTGACTTATGAGGGCCGGTTTGAGCTGCTCTCCTTATCCGGATCATTCACGCCA
ACTGATAGCGGTGGAACGAGAAGCCGCTCCGGTGGAATGAGCGTCTCGTTGGCGGCCACG
GATGGCCGTGTCATCGGAGGCGGAGTTGCCGGCCTCCTTGTGGCTGCAAGCCCTGTTCAG
GTTGTGGTAGGAAGCTTCCTGCCGAGCTACCAGCTGGACCAGAACGCCACCAAGAAGCCC
GTCATCGAGATCACGACGGTGCCGCCGCCGCCGCCGGCCATCGGCTTCACCATCTCCAGC
GGCGACCCTATGGAGGACTCCTACAGCGGCAGCCATGGCCAGCACCGCTCCGGCGCCGCC
GCGGCGACGACGACGACGGCGAAGGCCAACTCGACGTCGGCGTTCAGGGTGGAGAACTGG
ACGCCACCGGCGCCGCCGGCGGCGGAGGCGGCGAGGACGAAGACGCCGTCGTCGGAGGCC
AAAGTCCCAGTCCCCGGAGCCTGA

Peptide Sequence

PEP ID

Os02t0125200-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:1313881:1318611:1 gene:Os02g0125200 transcript:Os02t0125200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding protein. (Os02t0125200-00)
Sequence

ELLSWSPRRRPRRLRRLRLPLRSRRRRRRRRRSRRRRRWQWRRRRRQPISRQRRWFQSPW
QVRRRGEGTGRGRGGGRGSTGRYTPAAAVGAVMKRGRGRPVGFVSRASPVSVAVTAATST
AAVVVSSPATHTQTPLGPLGELVACASGANFTPHIINVAAGEDVNMKVISFSQQGPRAIC
ILSANGVISNVTLRQQDTLGGTVTYEGRFELLSLSGSFTPTDSGGTRSRSGGMSVSLAAT
DGRVIGGGVAGLLVAASPVQVVVGSFLPSYQLDQNATKKPVIEITTVPPPPPAIGFTISS
GDPMEDSYSGSHGQHRSGAAAATTTTAKANSTSAFRVENWTPPAPPAAEAARTKTPSSEA
KVPVPGA

Transcript Sequence

Transcript ID

Os02t0125200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1313881:1318611:1 gene:Os02g0125200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding protein. (Os02t0125200-00)
Sequence

TTAAATTAAACCCAAATCGATCCCTTTTATTTCCTATCTTGCATTTCCCATCTCCATCCT
CCCTCTCTTCTTCTCCTTCTCCCTCCCCTGTTCTTGAATTCCTCGCCGGAGAACTTCTCC
GGTGGTCTCTGAGTTCGCACTCCAGGTTAGAATTCTGGTGCGGTGGCTCGAGCTCGGGTT
CGAATTCGGATTTCCTGGGTTGGTTGATCTTGATCGCACTCGCGGGAAGAAGAAGAATTA
GGAAGCAGAGTGATCTCTGATGGTCACGGGCCGAGAAGGGAAGAGATAGGAGTTGTTGTC
ATGGAGCCCGCGACGGAGACCACGGCGACTTCGCCGGCTGCGGCTGCCGCTGCGCAGCCG
GAGGCGGAGGCGGAGGCGGAGGCGGAGTCGGCGGCGACGCCGGTGGCAGTGGCGGCGGCG
GCGGCGGCAACCTATCAGCCGCCAGCGCCGGTGGTTCCAGTCGCCGTGGCAGGTGCGGCG
GCGGGGAGAGGGAACGGGAAGAGGAAGAGGGGGAGGCCGAGGAAGTACGGGCCGGTACAC
GCCGGCGGCGGCGGTGGGGGCCGTCATGAAGCGCGGCAGGGGCCGCCCCGTCGGGTTCGT
CAGCCGCGCGTCGCCGGTGTCCGTGGCCGTGACGGCCGCCACGTCCACCGCCGCGGTGGT
CGTCTCGTCTCCGGCCACCCACACCCAGACGCCGCTCGGGCCGCTAGGTGAATTGGTAGC
ATGTGCTTCTGGTGCAAACTTCACACCTCATATCATTAACGTTGCTGCTGGCGAGGATGT
TAATATGAAGGTCATATCTTTCTCCCAACAAGGTCCAAGGGCAATTTGCATTCTGTCTGC
TAATGGGGTGATTTCAAATGTTACATTGCGTCAGCAAGATACTTTAGGTGGTACAGTGAC
TTATGAGGGCCGGTTTGAGCTGCTCTCCTTATCCGGATCATTCACGCCAACTGATAGCGG
TGGAACGAGAAGCCGCTCCGGTGGAATGAGCGTCTCGTTGGCGGCCACGGATGGCCGTGT
CATCGGAGGCGGAGTTGCCGGCCTCCTTGTGGCTGCAAGCCCTGTTCAGGTTGTGGTAGG
AAGCTTCCTGCCGAGCTACCAGCTGGACCAGAACGCCACCAAGAAGCCCGTCATCGAGAT
CACGACGGTGCCGCCGCCGCCGCCGGCCATCGGCTTCACCATCTCCAGCGGCGACCCTAT
GGAGGACTCCTACAGCGGCAGCCATGGCCAGCACCGCTCCGGCGCCGCCGCGGCGACGAC
GACGACGGCGAAGGCCAACTCGACGTCGGCGTTCAGGGTGGAGAACTGGACGCCACCGGC
GCCGCCGGCGGCGGAGGCGGCGAGGACGAAGACGCCGTCGTCGGAGGCCAAAGTCCCAGT
CCCCGGAGCCTGA