Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0125100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:1304905:1309799:-1 gene:Os02g0125100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homoaconitase/3-isopropylmalate dehydratase, small/large subunit domain containing protein. (Os02t0125100-01)
Sequence	ATGGCCTCCATCTCCGCCGCCTCCCCCGTCGCTGGGAAGGCCGCCGCCTTCGCCCACAAG AACGAGCTCGCCGCCGCCGCCGTGGCGCCGTCGCAGCAGCAGCTGCAGCGGAGGGTGAGT GGGAGGAGGGCGCGTTCGGGGAGGGTCCGCGCCGTCGCCACGCCCGCCCGCGCCCCCCGC GCCCCGTCCTCCACTGGCTCGGTGAAGAGCGCCATGACGATGACAGAGAAGATCCTGGCG AGGGCGTCGGAGCGCGCCAGCTTGGAGCCCGGGGAGAACGTGTGGGTGGACGTCGACGTG CTGATGACGCACGACGTCTGCGGCCCTGGCACCATCGGGATCTTCAAGCGGGAGTTCGGG GAGGACGCCAAGGTTTGGGACCGAGAGAAGGTGGTCATCATCCCGGACCACTACATCTTC ACCAGCGATGAGCGAGCAAACCGAAATGTTGATATCCTCAGGGATTTCTGTATGGAGCAG AACATCAAGTACTTCTATGACATCAAGGACCTGAGCAATTTCAAAGCAAATCCAGACTAC AAGGGTGTTTGCCACGTTGCTCTTGCTCAAGAGGGTCATTGCAGACCAGGCGAGGTTCTC CTTGGTACTGATTCTCATACATGCAATGCTGGAGCCTTTGGCCAATTTGCAACTGGAATT GGAAACACTGATGCTGGTTTTGTGATGGGCACTGGGAAGGCTCTTCTTAAGGTGCCTCCA ACTATCAGGTTTGTATTAGATGGAGAAATGCCACCTTATTTACTTGCAAAGGATCTGATT TTACAAATTATTGGTGAGATTTCTGTATCTGGCGCAACATACAAATCCATGGAGTTTGTT GGATCAACTGTGGAAAGTCTAAATATGGAAGAGCGAATGACACTGTGCAACATGGTTATT GAAGCTGGTGGCAAGAATGGTGTTGTGCCTGCCGATCAAACTACATTTAACTATCTTGAG GGCAAGACATCAGTTGAATACGAGCCTGTCTATAGTGATGCTCAGGCCAGATTTGTTAGT GACTACCGGTTTGATGTATCCAAATTGGAGCCAGTTATTGCCAAGCCACATTCACCTGAC AACCGTGCTCTAGCAAGAGAGTGCAAAGATGTCAAGATTGACCGGGTCTATATCGGTTCT TGTACTGGAGGTAAAACTGAGGACTTCTTTGCTGCTGCGAAGGTGTTCTTAGCTTCGGGG AAGAAGGTTAAAGTTCCCACTTTTCTCGTTCCGGCGACACAAAAGGTGTGGATGGACATT TATAGCATCCCTGTACCAGGAGCCGGTGGCAAAACTTGCTCACAGATATTTGAGGAGGCT GGTTGTGATACACCAGCTAGCCCTAGTTGTGGTGCTTGTTTGGGTGGTCCTCGTGATACA TATGCTCGCATGAATGAACCTATGGTGTGTGTGTCGACGACGAACAGGAATTTCCCCGGC AGGATGGGGCACAAGGAAGGGCAGATCTACCTGGCTTCGCCGTTCACCGCGGCGGCTTCA GCCCTCACCGGATACGTCACTGACCCCAGGGACTTCCTGATGTAA

Peptide Sequence

PEP ID	Os02t0125100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:1304905:1309799:-1 gene:Os02g0125100 transcript:Os02t0125100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homoaconitase/3-isopropylmalate dehydratase, small/large subunit domain containing protein. (Os02t0125100-01)
Sequence	MASISAASPVAGKAAAFAHKNELAAAAVAPSQQQLQRRVSGRRARSGRVRAVATPARAPR APSSTGSVKSAMTMTEKILARASERASLEPGENVWVDVDVLMTHDVCGPGTIGIFKREFG EDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLSNFKANPDY KGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFVMGTGKALLKVPP TIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESLNMEERMTLCNMVI EAGGKNGVVPADQTTFNYLEGKTSVEYEPVYSDAQARFVSDYRFDVSKLEPVIAKPHSPD NRALARECKDVKIDRVYIGSCTGGKTEDFFAAAKVFLASGKKVKVPTFLVPATQKVWMDI YSIPVPGAGGKTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMNEPMVCVSTTNRNFPG RMGHKEGQIYLASPFTAAASALTGYVTDPRDFLM

Transcript Sequence

Transcript ID	Os02t0125100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:1304905:1309799:-1 gene:Os02g0125100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homoaconitase/3-isopropylmalate dehydratase, small/large subunit domain containing protein. (Os02t0125100-01)
Sequence	ACAGGTGTTCGCCATTTCGCCGCCCCCACCACCGCGCGCCGCCGCCGCCGCCATGGCCTC CATCTCCGCCGCCTCCCCCGTCGCTGGGAAGGCCGCCGCCTTCGCCCACAAGAACGAGCT CGCCGCCGCCGCCGTGGCGCCGTCGCAGCAGCAGCTGCAGCGGAGGGTGAGTGGGAGGAG GGCGCGTTCGGGGAGGGTCCGCGCCGTCGCCACGCCCGCCCGCGCCCCCCGCGCCCCGTC CTCCACTGGCTCGGTGAAGAGCGCCATGACGATGACAGAGAAGATCCTGGCGAGGGCGTC GGAGCGCGCCAGCTTGGAGCCCGGGGAGAACGTGTGGGTGGACGTCGACGTGCTGATGAC GCACGACGTCTGCGGCCCTGGCACCATCGGGATCTTCAAGCGGGAGTTCGGGGAGGACGC CAAGGTTTGGGACCGAGAGAAGGTGGTCATCATCCCGGACCACTACATCTTCACCAGCGA TGAGCGAGCAAACCGAAATGTTGATATCCTCAGGGATTTCTGTATGGAGCAGAACATCAA GTACTTCTATGACATCAAGGACCTGAGCAATTTCAAAGCAAATCCAGACTACAAGGGTGT TTGCCACGTTGCTCTTGCTCAAGAGGGTCATTGCAGACCAGGCGAGGTTCTCCTTGGTAC TGATTCTCATACATGCAATGCTGGAGCCTTTGGCCAATTTGCAACTGGAATTGGAAACAC TGATGCTGGTTTTGTGATGGGCACTGGGAAGGCTCTTCTTAAGGTGCCTCCAACTATCAG GTTTGTATTAGATGGAGAAATGCCACCTTATTTACTTGCAAAGGATCTGATTTTACAAAT TATTGGTGAGATTTCTGTATCTGGCGCAACATACAAATCCATGGAGTTTGTTGGATCAAC TGTGGAAAGTCTAAATATGGAAGAGCGAATGACACTGTGCAACATGGTTATTGAAGCTGG TGGCAAGAATGGTGTTGTGCCTGCCGATCAAACTACATTTAACTATCTTGAGGGCAAGAC ATCAGTTGAATACGAGCCTGTCTATAGTGATGCTCAGGCCAGATTTGTTAGTGACTACCG GTTTGATGTATCCAAATTGGAGCCAGTTATTGCCAAGCCACATTCACCTGACAACCGTGC TCTAGCAAGAGAGTGCAAAGATGTCAAGATTGACCGGGTCTATATCGGTTCTTGTACTGG AGGTAAAACTGAGGACTTCTTTGCTGCTGCGAAGGTGTTCTTAGCTTCGGGGAAGAAGGT TAAAGTTCCCACTTTTCTCGTTCCGGCGACACAAAAGGTGTGGATGGACATTTATAGCAT CCCTGTACCAGGAGCCGGTGGCAAAACTTGCTCACAGATATTTGAGGAGGCTGGTTGTGA TACACCAGCTAGCCCTAGTTGTGGTGCTTGTTTGGGTGGTCCTCGTGATACATATGCTCG CATGAATGAACCTATGGTGTGTGTGTCGACGACGAACAGGAATTTCCCCGGCAGGATGGG GCACAAGGAAGGGCAGATCTACCTGGCTTCGCCGTTCACCGCGGCGGCTTCAGCCCTCAC CGGATACGTCACTGACCCCAGGGACTTCCTGATGTAAACAGTTAAAACACAAAAGGAGTT GGATGCTCAGAGCCATTGGCGTCTTGTACTACTGTACAACGGCTGTTTTTTCTTGTTCAA TTTCAGGTGTAGTGTAGGTTTGTCCCCTTGGGTAATAACAACCAATAAGTTATTTTCCTT TCATTCTATTTCCTAATTGTGTACTGGGATATTATATATTTGGTGGACATGATTTTGCTT G