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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0122600-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:1187089:1187904:-1 gene:Os02g0122600 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os02t0122600-00)
Sequence

ATGAACCATCACCAGCAGATTCGATCCACGACGGCGGCGGAGCAGCAGGAGGCGTCTGCC
GGAGGCGGCGGCGGCGAGGAGTACGAGGACCTGATGCCGGTGATGGCCGGGCGGCTGGGC
GCGGAGGGCCTGCTGTCGGAGCTCCGCGCCGGGTTCCGCCTCCTCGCCGACCCGGCGAGG
GGCGCCATCACCGCGGAGAGCCTGCGGCGGAGCGCGGCGAGCGTGCTGGGCCTGGGCGGC
GGCGGCGGCGAGATGACGGTGGAGGAGGCGGCGGCCATGGTGCGGGAGGGCGACCAGGAC
GGCGACGGCGCGCTGAGCGAGGCGGAGTTCTGCGTGCTGATGGTGCGGCTCAGCCCCGGC
ATCATGGGCGACGCCGAGGGATGGCTCGAGGAGGCCATCGCCGACGAGCTCCTCCGCTCG
CTGCCGCCGCCGCCGCCGGCCTAG

Peptide Sequence

PEP ID

Os02t0122600-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:1187089:1187904:-1 gene:Os02g0122600 transcript:Os02t0122600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os02t0122600-00)
Sequence

MNHHQQIRSTTAAEQQEASAGGGGGEEYEDLMPVMAGRLGAEGLLSELRAGFRLLADPAR
GAITAESLRRSAASVLGLGGGGGEMTVEEAAAMVREGDQDGDGALSEAEFCVLMVRLSPG
IMGDAEGWLEEAIADELLRSLPPPPPA

Transcript Sequence

Transcript ID

Os02t0122600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1187089:1187904:-1 gene:Os02g0122600 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os02t0122600-00)
Sequence

CGAACTCTCAACACCACTCTTGATCTTCTTGGCTTCCCTCGCCGGCCGGCAGCATGAACC
ATCACCAGCAGATTCGATCCACGACGGCGGCGGAGCAGCAGGAGGCGTCTGCCGGAGGCG
GCGGCGGCGAGGAGTACGAGGACCTGATGCCGGTGATGGCCGGGCGGCTGGGCGCGGAGG
GCCTGCTGTCGGAGCTCCGCGCCGGGTTCCGCCTCCTCGCCGACCCGGCGAGGGGCGCCA
TCACCGCGGAGAGCCTGCGGCGGAGCGCGGCGAGCGTGCTGGGCCTGGGCGGCGGCGGCG
GCGAGATGACGGTGGAGGAGGCGGCGGCCATGGTGCGGGAGGGCGACCAGGACGGCGACG
GCGCGCTGAGCGAGGCGGAGTTCTGCGTGCTGATGGTGCGGCTCAGCCCCGGCATCATGG
GCGACGCCGAGGGATGGCTCGAGGAGGCCATCGCCGACGAGCTCCTCCGCTCGCTGCCGC
CGCCGCCGCCGGCCTAGACCGTCATCTCTGCATATTAATCCTGCTTGAGGTTAATTAGTT
AATTACCGCGGTAATCCATCAGTGAAATTTATATATGACTGATGATATTGCAGGGCATCT
CGATGCGTATGTATGTATCGTCGTTGTTTCGTGGTAATAATAACTGGTAGTAACACGTGA
CTTGTATTTCTTGTGTCTGTTTCTCATCGAGTCATGATCTTTGCAAACGATGGCATTCTA
AATTCCATTCCAATTTTGAATTTCAAACCATCCGTCCTTTTCAAAAGAAAAAAAAACTCA
AAAAAAAATGGATGGAGAGAAATGTCAAGGCCCAAA