Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0122200-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:1166453:1173452:-1 gene:Os02g0122200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0122200-00)
Sequence

ATGTCCGCCCACCTCCGCCTCCTCTCCGCCGCGCCGCTCCCGGCGCTCCTCCCCACCCGC
CGCCTTCCCGCCGTGCCCACTCCCGCTCTCGCCGCCCGCGCGGCACGCCTCGTCCTCAGC
CGCCCGCTTACCGAGCCACAGCCGCCGCGCCTCCCCCGTGGCGCCGCCGCCCGCTGCCGC
GGGGTGGCCGTGGCGGGAGCGGATGGGGATGAGCCGGCGGCGGCGGCGGCTGGAACGGCG
GGGTTGTGGGAGCAGGTGCGGGACATCGTCGTGTTCGCTGGGCCGGCGCTGGGGCTCTGG
ATCTGCGGGCCCCTCATGAGCCTCATCGACACCATGGTCATCGGCCAGACTTCCTCCCTC
CAGCTCGCTGCCCTAGGGCCTGGAACGGTGTTCTGCGATTACCTCTGCTATATATTCATG
TTCCTTTCGATCGCGACCTCCAACATGGTGGCCACCTCCTTAGCTAAAAAGGATGAAGAA
CTTGCACAGCACCAAGTATCTATGTTGCTGTTTGTTGCTCTTACTTGTGGTTTAGGAATG
TTTTTGTTCACCAAGCTTTTTGGGACTCAAGTGTTAACTGTGTTTACTGGATCGGGGAAC
TATGATATCATTTCTGCTGCCAATACATATGCACAGATTAGAGGCTTTGCATGGCCTGCA
GTTCTGGTTGGCTTAGTTGCTCAAAGTGCTAGTCTAGGCATGAAAGATTCTTGGGGTCCC
TTGAAGGCATTGGCAGCTGCTAGTGTTATCAATGGTGTTGGGGACCTTCTTCTCTGTTCT
GTATGTGGATATGGAATTGCTGGCGCTGCCTGGGCAACTATGGTTTCACAGATTGTTGCA
GCTTTTATGATGATGCAAAATCTAAATAAGAGAGGATTTCGAGCTTTTTCATTCACAATC
CCATCATCAAGTGAGCTTCTGCAGATTTTTGAAATTGCAGCTCCTGTTTTCATAACAATG
ACCTCCAAGGTAGCATTTTACGCGTTACTTACGTATTCTGCAACTTCTATGGGAGCAATA
ACACTTGCAGCCCACCAGGTTATGGTTAATGTCCTATGCATGTGCACTGTTTGGGGTGAG
CCCCTGTCACAAACTGCACAGTCATTCATGCCAGAGTTGATATATGGAGCTAAGTGCAAT
TTGATGAAGGCAAGGATGCTATTGAAATCACTTGTCATGATTGGAGCAATAACTGGAACG
ACTGTGGGGGCAGTAGGAACACTTGTTCCGTGGCTTTTTCCTAGTCTCTTTACTAATGAT
TTTATGGTTGTCCAACAGATGCATAAAGTGCTGATTCCATATTTCTGTGCATTATTGGTG
ACACCTTCAGTGCATAGTCTTGAAGGAACATTATTGGCTGGAAGAGATCTCAGGTTTTTG
AGTCAATCAATGGGAGCATGCTTTGGCATTGGAACCTTTCTACTAATGGTATGA

Peptide Sequence

PEP ID

Os02t0122200-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:1166453:1173452:-1 gene:Os02g0122200 transcript:Os02t0122200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0122200-00)
Sequence

MSAHLRLLSAAPLPALLPTRRLPAVPTPALAARAARLVLSRPLTEPQPPRLPRGAAARCR
GVAVAGADGDEPAAAAAGTAGLWEQVRDIVVFAGPALGLWICGPLMSLIDTMVIGQTSSL
QLAALGPGTVFCDYLCYIFMFLSIATSNMVATSLAKKDEELAQHQVSMLLFVALTCGLGM
FLFTKLFGTQVLTVFTGSGNYDIISAANTYAQIRGFAWPAVLVGLVAQSASLGMKDSWGP
LKALAAASVINGVGDLLLCSVCGYGIAGAAWATMVSQIVAAFMMMQNLNKRGFRAFSFTI
PSSSELLQIFEIAAPVFITMTSKVAFYALLTYSATSMGAITLAAHQVMVNVLCMCTVWGE
PLSQTAQSFMPELIYGAKCNLMKARMLLKSLVMIGAITGTTVGAVGTLVPWLFPSLFTND
FMVVQQMHKVLIPYFCALLVTPSVHSLEGTLLAGRDLRFLSQSMGACFGIGTFLLMV

Transcript Sequence

Transcript ID

Os02t0122200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1166453:1173452:-1 gene:Os02g0122200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0122200-00)
Sequence

GCCATGTCCGCCCACCTCCGCCTCCTCTCCGCCGCGCCGCTCCCGGCGCTCCTCCCCACC
CGCCGCCTTCCCGCCGTGCCCACTCCCGCTCTCGCCGCCCGCGCGGCACGCCTCGTCCTC
AGCCGCCCGCTTACCGAGCCACAGCCGCCGCGCCTCCCCCGTGGCGCCGCCGCCCGCTGC
CGCGGGGTGGCCGTGGCGGGAGCGGATGGGGATGAGCCGGCGGCGGCGGCGGCTGGAACG
GCGGGGTTGTGGGAGCAGGTGCGGGACATCGTCGTGTTCGCTGGGCCGGCGCTGGGGCTC
TGGATCTGCGGGCCCCTCATGAGCCTCATCGACACCATGGTCATCGGCCAGACTTCCTCC
CTCCAGCTCGCTGCCCTAGGGCCTGGAACGGTGTTCTGCGATTACCTCTGCTATATATTC
ATGTTCCTTTCGATCGCGACCTCCAACATGGTGGCCACCTCCTTAGCTAAAAAGGATGAA
GAACTTGCACAGCACCAAGTATCTATGTTGCTGTTTGTTGCTCTTACTTGTGGTTTAGGA
ATGTTTTTGTTCACCAAGCTTTTTGGGACTCAAGTGTTAACTGTGTTTACTGGATCGGGG
AACTATGATATCATTTCTGCTGCCAATACATATGCACAGATTAGAGGCTTTGCATGGCCT
GCAGTTCTGGTTGGCTTAGTTGCTCAAAGTGCTAGTCTAGGCATGAAAGATTCTTGGGGT
CCCTTGAAGGCATTGGCAGCTGCTAGTGTTATCAATGGTGTTGGGGACCTTCTTCTCTGT
TCTGTATGTGGATATGGAATTGCTGGCGCTGCCTGGGCAACTATGGTTTCACAGATTGTT
GCAGCTTTTATGATGATGCAAAATCTAAATAAGAGAGGATTTCGAGCTTTTTCATTCACA
ATCCCATCATCAAGTGAGCTTCTGCAGATTTTTGAAATTGCAGCTCCTGTTTTCATAACA
ATGACCTCCAAGGTAGCATTTTACGCGTTACTTACGTATTCTGCAACTTCTATGGGAGCA
ATAACACTTGCAGCCCACCAGGTTATGGTTAATGTCCTATGCATGTGCACTGTTTGGGGT
GAGCCCCTGTCACAAACTGCACAGTCATTCATGCCAGAGTTGATATATGGAGCTAAGTGC
AATTTGATGAAGGCAAGGATGCTATTGAAATCACTTGTCATGATTGGAGCAATAACTGGA
ACGACTGTGGGGGCAGTAGGAACACTTGTTCCGTGGCTTTTTCCTAGTCTCTTTACTAAT
GATTTTATGGTTGTCCAACAGATGCATAAAGTGCTGATTCCATATTTCTGTGCATTATTG
GTGACACCTTCAGTGCATAGTCTTGAAGGAACATTATTGGCTGGAAGAGATCTCAGGTTT
TTGAGTCAATCAATGGGAGCATGCTTTGGCATTGGAACCTTTCTACTAATGGTATGACCG
TATGACTGTTTCCTTTCTTTCTCCTTTGGTGAGGTACTGATGTTAGATATAGGGTCGGTT
TGGAAGTGCTTTACAACGGCTTCTTTCTCCAACGGGCATGCTATATAACGAAAACTTCAA
TAACCATCATGATGAGTATGTCAAGGTGAAGGCCACATAAGAAGTAGTATGAATTATAGG
TTTTCCTGAGGTGACAACAAAGATGAAAAGAGTTGCATAAGCCCAGAAAGATCATTCTGC
AATCTCTGCTGATCAGTGGCACCTCAGCTCTCATACAGAAGCTGCACTTAGTTCATAGTA
TGATCTTTGGAACGGAATTCAAGACATGATGGCCCAGAAGATTAGACCAGGAAAAATCAG
TAAGTTGTAGGGTAGAATTCGTTCTCCTGT