Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0122100-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:1162134:1165062:1 gene:Os02g0122100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to JHL05D22.13 protein. (Os02t0122100-00)
Sequence

AACTCTTCACCTTGCTCTCCCTTTCAGCAGCTCGGATCGCCGCCGGATCAACCGCCGCCG
CCGCCGCCGCGCCAGCGAGTCGGAACGCGGCGGTGGAGGGTGGAACGCCGCCATGACATC
GACGCCTTCACGCCCGGATTGCTCTCCCTCTACGAATCCCTCAATCCATCAGAGGAGCAC
AAGGCCAAGCAGAGGCAGCTCATCGAATCCCTCACGAATTCTGTGAGCAAAGAGTGGCCC
AACGCCCAGCTGCATCTCTATGGATCGTGTGCTAATTCCTTCGGAAATTCGCATAGCGAT
GTAGATGTTTGTCTCCAAATTGACACTGCTGCAGAAGAGAACATTGCTGAGCTTCTTCTC
GCATTAGCAGAGACATTGCGCAAGGATGATTTCGACAATGTTGAGGCTATTACCAGTGCT
CGAGTTCCAATTGTGAAGATTGCAGATCCAGGAAGTGGCTTGTCATGTGATATCTGTGTC
AACAATCTCTTTGCTGTTGCTAACACAAAGCTTCTCAAGGATTATGCCCAGATAGATGAG
AGGTTGCTTCAGCTGGCCTTCATTGTAAAGCACTGGGCCAAACTAAGGGGCGTTAATGAA
ACATATCGTGGAACCCTTTCGAGCTATGCATATGTGCTTATGTGCATTAGCTTCTTGCAG
CAAAGAGAGCCCAAGATTCTACCATGTTTGCAGGCGATGGAGCCAACATATACTGTGGTT
GTCGATGGCACTGAATGTGCATACTTCGACCAAGTTGACCAGCTTAAAGATTTTGGTGCT
GAAAACAAGGAGAGCATCGCCGAGTTACTGTGGGCATTCTTCCACTACTGGGCATTCCAT
CACGATTACAGGAACGATGTCATCTCCGTCCGCATGGGGAACACAATCAGCAAGCAGGAG
AAGAACTGGACGACTCGCGTTGGAAACGATCGCCATCTGATATGCATCGAGGATCCTTTC
GAGACCAGCCATGACCTCGGTCGTGTTGTCGACAGGCAGACAATCAGGGTTCTCAGGGAG
GAGTTTGAGCGAGCTGCCACCATTCTGCAGTACGACGATGACCCTTGTGTGGCTCTTTTT
GAGCCCTATGATTATGAATCTTGA

Peptide Sequence

PEP ID

Os02t0122100-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:1162134:1165062:1 gene:Os02g0122100 transcript:Os02t0122100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to JHL05D22.13 protein. (Os02t0122100-00)
Sequence

NSSPCSPFQQLGSPPDQPPPPPPRQRVGTRRWRVERRHDIDAFTPGLLSLYESLNPSEEH
KAKQRQLIESLTNSVSKEWPNAQLHLYGSCANSFGNSHSDVDVCLQIDTAAEENIAELLL
ALAETLRKDDFDNVEAITSARVPIVKIADPGSGLSCDICVNNLFAVANTKLLKDYAQIDE
RLLQLAFIVKHWAKLRGVNETYRGTLSSYAYVLMCISFLQQREPKILPCLQAMEPTYTVV
VDGTECAYFDQVDQLKDFGAENKESIAELLWAFFHYWAFHHDYRNDVISVRMGNTISKQE
KNWTTRVGNDRHLICIEDPFETSHDLGRVVDRQTIRVLREEFERAATILQYDDDPCVALF
EPYDYES

Transcript Sequence

Transcript ID

Os02t0122100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1162134:1165062:1 gene:Os02g0122100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to JHL05D22.13 protein. (Os02t0122100-00)
Sequence

CGAACCACCGCGCGCCATGGTCGGCGGCGAGCCCTTGCGGCGGCGGCGGCATCTCGCCGA
CGATGGATTCTTCCGGTTCCTCCTCCCCTCGCCGAAGCCGGCCACCACCACCACCACCAC
CCCTCCTCCCGCCGCGCTGTTCGTCCCGCCCCACCGCCTCATCGCGCCACCCGTGCCGCT
CCCCCAGCCACCCCGCCCCGAGGAGCGCCTCTTCATCGTGCCCCCCACGCGCCCTTCCTG
GCTCCCGCCTCTCTCGATACCTCCGCCGGCGACGGCGACGGCCCCGCCGCCGACTCGTTG
CCCTCCGCGGCGGATGGGCAATGGTGGTGGTGGTTGCTTTGGCGGCCGGAGTGGGGTGGT
GGGGTGGAGGTATGGAGGTTTCGTCGGGAATGGTGGACGTCGTGGCTTCGAGCGGCGGAG
GGTGGGAGGAGGCTTCATCGGAGCAGCGAATGCAGGCGAGGCCACCGGCGGCGAGAGGCG
GGCGGTGGTGCGTAAGAGGGAGAAGAAGGTGTGGGTCGCCGTGGAGAAGAAGGGCGAGGA
CTGCGGCGGCGGGGATGAGGACCAGGCGGCGATGGGCGCGGGCTATGCCGGTGGAGATGA
GAGGGACGAGCAGGTGGACGTCGACGACGACGAACAAGACGACGGCGACGGCGATGACCC
TTTCGACGTCGCCGCCGATCACGACCTCCTCGCCGTCACTTCACCGACGCTTCATGCTAT
GAAACTCTTCACCTTGCTCTCCCTTTCAGCAGCTCGGATCGCCGCCGGATCAACCGCCGC
CGCCGCCGCCGCGCCAGCGAGTCGGAACGCGGCGGTGGAGGGTGGAACGCCGCCATGACA
TCGACGCCTTCACGCCCGGATTGCTCTCCCTCTACGAATCCCTCAATCCATCAGAGGAGC
ACAAGGCCAAGCAGAGGCAGCTCATCGAATCCCTCACGAATTCTGTGAGCAAAGAGTGGC
CCAACGCCCAGCTGCATCTCTATGGATCGTGTGCTAATTCCTTCGGAAATTCGCATAGCG
ATGTAGATGTTTGTCTCCAAATTGACACTGCTGCAGAAGAGAACATTGCTGAGCTTCTTC
TCGCATTAGCAGAGACATTGCGCAAGGATGATTTCGACAATGTTGAGGCTATTACCAGTG
CTCGAGTTCCAATTGTGAAGATTGCAGATCCAGGAAGTGGCTTGTCATGTGATATCTGTG
TCAACAATCTCTTTGCTGTTGCTAACACAAAGCTTCTCAAGGATTATGCCCAGATAGATG
AGAGGTTGCTTCAGCTGGCCTTCATTGTAAAGCACTGGGCCAAACTAAGGGGCGTTAATG
AAACATATCGTGGAACCCTTTCGAGCTATGCATATGTGCTTATGTGCATTAGCTTCTTGC
AGCAAAGAGAGCCCAAGATTCTACCATGTTTGCAGGCGATGGAGCCAACATATACTGTGG
TTGTCGATGGCACTGAATGTGCATACTTCGACCAAGTTGACCAGCTTAAAGATTTTGGTG
CTGAAAACAAGGAGAGCATCGCCGAGTTACTGTGGGCATTCTTCCACTACTGGGCATTCC
ATCACGATTACAGGAACGATGTCATCTCCGTCCGCATGGGGAACACAATCAGCAAGCAGG
AGAAGAACTGGACGACTCGCGTTGGAAACGATCGCCATCTGATATGCATCGAGGATCCTT
TCGAGACCAGCCATGACCTCGGTCGTGTTGTCGACAGGCAGACAATCAGGGTTCTCAGGG
AGGAGTTTGAGCGAGCTGCCACCATTCTGCAGTACGACGATGACCCTTGTGTGGCTCTTT
TTGAGCCCTATGATTATGAATCTTGA