Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0122000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1158885:1161181:-1 gene:Os02g0122000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P18. (Os02t0122000-01)
Sequence

ATGGCGGGAAGGGGCGAGATGCCGATGAGGCCTGTGCGGCCAGGGCCGCCGATGCAGTAC
CGGGGGCCTCCTCCCATGGCTCGCGCGCGCGTCGAACCCGTCGATCGCGAGAAGACGTGC
CCTCTCCTGCTCCGGGTTTTCACAAAGGTTGGTGGCCATCACCAAAATGAAGAGTTTGCC
GTGAGAGGAAAGGAGCCGAAAGATGAAGTGCAGATATACACGTGGAAGGATGCCACACTC
CGAGAGCTCACTGATCTTGTGAAAGAGGTTGCTCTTGCAGCAAGAAAAAGAAATGCAAGG
CTTTCTTTTGCTTTCGTGTACCCTGATAAGCATGGTCGTTTCGTTGTCAAAGAGGTGGGT
TCAACCTTCTCTTATGGCCATGGAAGGGGAGATGATGCTAAAACTCTTGCAGAGCTAGGA
TTCCAGATAGGGGATTACTTGAGTGTTGCAATCTATTGA

Peptide Sequence

PEP ID

Os02t0122000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1158885:1161181:-1 gene:Os02g0122000 transcript:Os02t0122000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P18. (Os02t0122000-01)
Sequence

MAGRGEMPMRPVRPGPPMQYRGPPPMARARVEPVDREKTCPLLLRVFTKVGGHHQNEEFA
VRGKEPKDEVQIYTWKDATLRELTDLVKEVALAARKRNARLSFAFVYPDKHGRFVVKEVG
STFSYGHGRGDDAKTLAELGFQIGDYLSVAIY

Transcript Sequence

Transcript ID

Os02t0122000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1158885:1161181:-1 gene:Os02g0122000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P18. (Os02t0122000-01)
Sequence

AGGTGAGCAAGGTCAGTCGCTTGCTGATTGGTGATTCCGGAGCAGTAGATTGATTCGTAC
TAGCTTTCTTCTTCCTCGGGCAGGGCAGGGGGAGGTCTCGTTGCGATGGCGGGAAGGGGC
GAGATGCCGATGAGGCCTGTGCGGCCAGGGCCGCCGATGCAGTACCGGGGGCCTCCTCCC
ATGGCTCGCGCGCGCGTCGAACCCGTCGATCGCGAGAAGACGTGCCCTCTCCTGCTCCGG
GTTTTCACAAAGGTTGGTGGCCATCACCAAAATGAAGAGTTTGCCGTGAGAGGAAAGGAG
CCGAAAGATGAAGTGCAGATATACACGTGGAAGGATGCCACACTCCGAGAGCTCACTGAT
CTTGTGAAAGAGGTTGCTCTTGCAGCAAGAAAAAGAAATGCAAGGCTTTCTTTTGCTTTC
GTGTACCCTGATAAGCATGGTCGTTTCGTTGTCAAAGAGGTGGGTTCAACCTTCTCTTAT
GGCCATGGAAGGGGAGATGATGCTAAAACTCTTGCAGAGCTAGGATTCCAGATAGGGGAT
TACTTGAGTGTTGCAATCTATTGAGTGACACTGCTTCACGAAATAGTGTGTTTCTCCCTG
CCTACCATGCTGAATCCAGCTTTCCTGTGGCGGTACCCAGCTTTCCTGTGGTGGTGAATA
TCTCTGTAGTACTAGAGACGTGATACCAGAACTGTTTGTTATGGTAGTAACCTTGGAATT
CACTCAGTATTTCGAGTGTGTTGAACACTTAAAACGTTTGATGTGATTGCGTGTTATATA
CCTGTTCGTGGTTTCCTTGGAACTGTGAGATCTGAACATCACGCGTTTTCCATTGATTCT
CTGCGCCGAGTAGGATTAAATGTGTTCTGTGCTAAATAACTGGGTGAAGGAACATAATGT
TCTTATGATC