Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0121900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1154674:1156855:1 gene:Os02g0121900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0121900-01)
Sequence

ATGAATCGCGCGGCGAGGTCGAGGTCGCCGGAGGACGCGTCGGTGGCGGCGGCGCGGAAG
CTGCACCTCCTCCTCCGCTCCCGGGACCTCCGCCCGGCGCTCTCCTACCTCCGCACCCTC
CCCTCGCCGCTCACCCTCCTCCCCAACCACGCCCTCAACGCCCTCCTCCGCGCGCTCGCC
GCCGCCGGCCGCGTCCGCGCCGCCGCCGCCCTCTTCCGCCGCATCCCTTCCCCCACACCG
CACTCCTTCAACTCCCTCCTCGCCGCCCTCCTCCGCCGCGGCCGCCGCCGCGCGGCCTCC
GCGCTCTTCGCCGCGCTCCTCCGCTCCCCCTCCGCCTCCCCCGACGCCGCCACCCTCAAC
ACCCTCCTCCACGGCCTTTCCACCGCATCCCCGCACCCGTCCACTCCCGCGCTCCTCAGG
CTCTTCCGCTTCTTGCCCGACACCTACGCCTTCGCGCCGGACGCCATCTCGTACAACTCG
CTGCTCTCCGCTCTCTGCCGCGCCGGCGACGTGCTCACCGCGCGCAAGCTGTTCGACGGA
ATGCGCGTCGGAGGAGAAGAAGGCAGAGGAGCTGTCTTTCCTAACGTTATCACATACACG
ACCATGATCAAGGCGTACTGCGCCAAGAGGCTCGTGAACGAGGCTCTCGCGATCTTCAAG
CTAATGGTTGCGGATGGTGTGGCGCCGAACAGGATCACATACAACACGATGGTGCAGGGG
TTCTGCGATGCCGGCAGGATGGAGCTAGTGAAGGAGGTGTTGGAGATGGACTCGTTTAGG
CCGGACACTTGCACATTCAACACTCTGGTGGCCGTGCATTGTAGGGAAGGCCGGATCGAG
GATGCTATGAAGGTGTTTAATCAGATGGTGGAGCTCCGTGTGAGACGTGATTCTGCAAGC
TATAGCATGGTCATCCGGGTGTTGTGTGAGAATGGGGAATTTGGGCAGGCTGAGGAGCTT
GTGGATGAGCTCTTGGAGAAGGAGGTGCTCAAGAAGAGAGGGGGTTGCACGCCGCTCATT
GCAGCGTACAACCCGGTTTTTGTGTACTTGTGTGAGCATGGGAAGACAAAGAAGGCAAGG
ATGCTGTTTGGGCAGCTGCTGGACCGGAGGAGCAAGGTCGATGTTCCTGCATTCAAGACA
TTGATCCTTGGGCATTGCAGAGAGGGTGATTTCGAAGAAGGGTATGCATTGCTGCTCTCA
ATGTTGAAGCGGGATCTTGTCCCTGATGATGAATGCTACATTGCCGTGATTGAAGGGTTT
TCACAGAGGGGAAGGATGAAGTTTGCATGGGAAGCCTTGCACAGGATGTTGAATAGCGGT
CTTCGGCCAAGCACAAGTACTTTTCACTCGGTTCTTTTGGGGCTTTTGAACAAAGATGGT
TGTGCAAAAGAAGCAGCTGATTTGATTGAGATAATGCTAGAGAGGAAGATTCGCCAAAAT
GTTGATCTTTCGACAAATTTGGTAGATACATTGTTCAGGAACAACCTAAATGACCGTGCT
TACAAGATTGTTACATCTCTATATGACCATGGCTATTACATCAAGATGGAAAAGTTAATC
GCAAACCTTTGCGAGGAAAAGAAGTTCATAGAAGCTGCAGATTTTACTTTGTTTAGCTTG
GAGAAGTCTCAGAATTTTGGTGTAGCCATTCCAAGCATGGTTCTGGATGGTCTTTGCATG
ACTGGTAGAGCTTCAGAAGCATTCCGGCTGTTCTATGAACTCATTGAGAACAGAAGTGCT
TTGGCTTCTGTCGCTGCACCTCGTAGTTTAGTTGCACTTCATCATGCACTGGAGGAATCC
GGGAAAATGAAGGAAGCTGATTTTATTGCTAGACAGATGAGACGTGCAAGTGCCAGAATA
AGGGAAAGAATCTAG

Peptide Sequence

PEP ID

Os02t0121900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1154674:1156855:1 gene:Os02g0121900 transcript:Os02t0121900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0121900-01)
Sequence

MNRAARSRSPEDASVAAARKLHLLLRSRDLRPALSYLRTLPSPLTLLPNHALNALLRALA
AAGRVRAAAALFRRIPSPTPHSFNSLLAALLRRGRRRAASALFAALLRSPSASPDAATLN
TLLHGLSTASPHPSTPALLRLFRFLPDTYAFAPDAISYNSLLSALCRAGDVLTARKLFDG
MRVGGEEGRGAVFPNVITYTTMIKAYCAKRLVNEALAIFKLMVADGVAPNRITYNTMVQG
FCDAGRMELVKEVLEMDSFRPDTCTFNTLVAVHCREGRIEDAMKVFNQMVELRVRRDSAS
YSMVIRVLCENGEFGQAEELVDELLEKEVLKKRGGCTPLIAAYNPVFVYLCEHGKTKKAR
MLFGQLLDRRSKVDVPAFKTLILGHCREGDFEEGYALLLSMLKRDLVPDDECYIAVIEGF
SQRGRMKFAWEALHRMLNSGLRPSTSTFHSVLLGLLNKDGCAKEAADLIEIMLERKIRQN
VDLSTNLVDTLFRNNLNDRAYKIVTSLYDHGYYIKMEKLIANLCEEKKFIEAADFTLFSL
EKSQNFGVAIPSMVLDGLCMTGRASEAFRLFYELIENRSALASVAAPRSLVALHHALEES
GKMKEADFIARQMRRASARIRERI

Transcript Sequence

Transcript ID

Os02t0121900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1154674:1156855:1 gene:Os02g0121900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0121900-01)
Sequence

GGAAAATAAAAGTTCGGTGCAATGAATCGCGCGGCGAGGTCGAGGTCGCCGGAGGACGCG
TCGGTGGCGGCGGCGCGGAAGCTGCACCTCCTCCTCCGCTCCCGGGACCTCCGCCCGGCG
CTCTCCTACCTCCGCACCCTCCCCTCGCCGCTCACCCTCCTCCCCAACCACGCCCTCAAC
GCCCTCCTCCGCGCGCTCGCCGCCGCCGGCCGCGTCCGCGCCGCCGCCGCCCTCTTCCGC
CGCATCCCTTCCCCCACACCGCACTCCTTCAACTCCCTCCTCGCCGCCCTCCTCCGCCGC
GGCCGCCGCCGCGCGGCCTCCGCGCTCTTCGCCGCGCTCCTCCGCTCCCCCTCCGCCTCC
CCCGACGCCGCCACCCTCAACACCCTCCTCCACGGCCTTTCCACCGCATCCCCGCACCCG
TCCACTCCCGCGCTCCTCAGGCTCTTCCGCTTCTTGCCCGACACCTACGCCTTCGCGCCG
GACGCCATCTCGTACAACTCGCTGCTCTCCGCTCTCTGCCGCGCCGGCGACGTGCTCACC
GCGCGCAAGCTGTTCGACGGAATGCGCGTCGGAGGAGAAGAAGGCAGAGGAGCTGTCTTT
CCTAACGTTATCACATACACGACCATGATCAAGGCGTACTGCGCCAAGAGGCTCGTGAAC
GAGGCTCTCGCGATCTTCAAGCTAATGGTTGCGGATGGTGTGGCGCCGAACAGGATCACA
TACAACACGATGGTGCAGGGGTTCTGCGATGCCGGCAGGATGGAGCTAGTGAAGGAGGTG
TTGGAGATGGACTCGTTTAGGCCGGACACTTGCACATTCAACACTCTGGTGGCCGTGCAT
TGTAGGGAAGGCCGGATCGAGGATGCTATGAAGGTGTTTAATCAGATGGTGGAGCTCCGT
GTGAGACGTGATTCTGCAAGCTATAGCATGGTCATCCGGGTGTTGTGTGAGAATGGGGAA
TTTGGGCAGGCTGAGGAGCTTGTGGATGAGCTCTTGGAGAAGGAGGTGCTCAAGAAGAGA
GGGGGTTGCACGCCGCTCATTGCAGCGTACAACCCGGTTTTTGTGTACTTGTGTGAGCAT
GGGAAGACAAAGAAGGCAAGGATGCTGTTTGGGCAGCTGCTGGACCGGAGGAGCAAGGTC
GATGTTCCTGCATTCAAGACATTGATCCTTGGGCATTGCAGAGAGGGTGATTTCGAAGAA
GGGTATGCATTGCTGCTCTCAATGTTGAAGCGGGATCTTGTCCCTGATGATGAATGCTAC
ATTGCCGTGATTGAAGGGTTTTCACAGAGGGGAAGGATGAAGTTTGCATGGGAAGCCTTG
CACAGGATGTTGAATAGCGGTCTTCGGCCAAGCACAAGTACTTTTCACTCGGTTCTTTTG
GGGCTTTTGAACAAAGATGGTTGTGCAAAAGAAGCAGCTGATTTGATTGAGATAATGCTA
GAGAGGAAGATTCGCCAAAATGTTGATCTTTCGACAAATTTGGTAGATACATTGTTCAGG
AACAACCTAAATGACCGTGCTTACAAGATTGTTACATCTCTATATGACCATGGCTATTAC
ATCAAGATGGAAAAGTTAATCGCAAACCTTTGCGAGGAAAAGAAGTTCATAGAAGCTGCA
GATTTTACTTTGTTTAGCTTGGAGAAGTCTCAGAATTTTGGTGTAGCCATTCCAAGCATG
GTTCTGGATGGTCTTTGCATGACTGGTAGAGCTTCAGAAGCATTCCGGCTGTTCTATGAA
CTCATTGAGAACAGAAGTGCTTTGGCTTCTGTCGCTGCACCTCGTAGTTTAGTTGCACTT
CATCATGCACTGGAGGAATCCGGGAAAATGAAGGAAGCTGATTTTATTGCTAGACAGATG
AGACGTGCAAGTGCCAGAATAAGGGAAAGAATCTAGTGGGTTGCTTTGTCCCAAGGAGCA
TTTCAATCGCATGCCCTTTGCTTCTCCAAACAGGATGGACTAATAAGTGTGAACTTAAAA
GAACGAACAGGATGCAGAAACTGTGCCTGATCCACTGCCCCATAAGAAATGGATCAACCA
ACTGTATGATGTTAGAATGCAGATTAATTCAGCAGATATCCTTTTTTTTTTCAGGGAAAC
TATGGCGGGTGGATTAGCACCGGCCTGAACATTTATTGATAAATAAAGAGATAGTTACAA
ATAAAGATAATTTACATGGAGG