Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0121300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1116066:1116952:1 gene:Os02g0121300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATERAL ROOTLESS2 description:Cyclophilin, Peptidyl-prolyl cis-trans isomerase, Auxin signal transduction, Lateral root initiation, Stress tolerance (Os02t0121300-01)
Sequence

ATGTCGAACACGAGGGTGTTCTTCGACATGACCGTCGGCGGAGCTCCGGCGGGGCGGATC
GTGATGGAGCTGTACGCGAAGGACGTGCCGCGGACGGCGGAGAACTTCCGCGCGCTCTGC
ACCGGCGAGAAGGGCGTGGGCAAGAGCGGCAAGCCGCTGCACTACAAGGGGAGCACCTTC
CACCGCGTGATCCCGGAGTTCATGTGCCAGGGCGGCGACTTCACCCGCGGCAACGGCACG
GGAGGGGAGTCGATCTACGGCGAGAAGTTCGCCGACGAGGTGTTCAAGTTCAAGCACGAC
AGCCCCGGCATCCTGTCCATGGCGAACGCCGGGCCCAACACTAACGGGTCCCAGTTCTTC
ATCTGCACCGTGCCCTGCAGCTGGCTGGACGGGAAGCACGTCGTGTTCGGCCGCGTCGTC
GAGGGCATGGACGTCGTCAAGGCCATCGAGAAGGTGGGATCCCGCGGCGGGAGCACCGCC
AAGCCGGTCGTCATCGCCGACTGCGGCCAGCTCTCCTAG

Peptide Sequence

PEP ID

Os02t0121300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1116066:1116952:1 gene:Os02g0121300 transcript:Os02t0121300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATERAL ROOTLESS2 description:Cyclophilin, Peptidyl-prolyl cis-trans isomerase, Auxin signal transduction, Lateral root initiation, Stress tolerance (Os02t0121300-01)
Sequence

MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF
HRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFF
ICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVVIADCGQLS

Transcript Sequence

Transcript ID

Os02t0121300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1116066:1116952:1 gene:Os02g0121300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATERAL ROOTLESS2 description:Cyclophilin, Peptidyl-prolyl cis-trans isomerase, Auxin signal transduction, Lateral root initiation, Stress tolerance (Os02t0121300-01)
Sequence

ACGCAGCGATCTGAAGTGAAACAGCAAAAAAAATCAAACAAAAAGAAAAAATATTCCCCA
TCTGTGAAATTCGCAAAACCCTAGCGCGGCGGCGATGTCGAACACGAGGGTGTTCTTCGA
CATGACCGTCGGCGGAGCTCCGGCGGGGCGGATCGTGATGGAGCTGTACGCGAAGGACGT
GCCGCGGACGGCGGAGAACTTCCGCGCGCTCTGCACCGGCGAGAAGGGCGTGGGCAAGAG
CGGCAAGCCGCTGCACTACAAGGGGAGCACCTTCCACCGCGTGATCCCGGAGTTCATGTG
CCAGGGCGGCGACTTCACCCGCGGCAACGGCACGGGAGGGGAGTCGATCTACGGCGAGAA
GTTCGCCGACGAGGTGTTCAAGTTCAAGCACGACAGCCCCGGCATCCTGTCCATGGCGAA
CGCCGGGCCCAACACTAACGGGTCCCAGTTCTTCATCTGCACCGTGCCCTGCAGCTGGCT
GGACGGGAAGCACGTCGTGTTCGGCCGCGTCGTCGAGGGCATGGACGTCGTCAAGGCCAT
CGAGAAGGTGGGATCCCGCGGCGGGAGCACCGCCAAGCCGGTCGTCATCGCCGACTGCGG
CCAGCTCTCCTAGATCTGTGCTGTTCCCCTTCGCCTTTCGCCAGTATCAGTCGTCTTGAG
TCGTCGAGTCCCTAAATAAGGAGGAGGTGGTGGTGGTGTTAGTCTTTTTATGAGTTCGTG
TCGTGTTGGTGAGATGAGATCGCCCATGGTTTGGTTGGATTAGGCGGAGTTCTTGGATCG
ATTCGGTGGAGTTGGATCTGCGATCCTTCTTGGGGTTGGTTTTAAATCTTAATTCGTGTC
GCTGCTTCTATGATATCGCTATCAATCAATGAGAACATTTGGGATCC