Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0120000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:1047669:1050120:-1 gene:Os02g0120000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0120000-01)
Sequence	ATGGCGGTGGCGGTGGCGGCGTCGCTCTCGACCCCGGCGCCATCGCCGGCGGCCGGGGGG AGGGGCCGGAGGAGGGTGAACGTGGCGGTGGCGTCCCTGCGGCGGGCGGCGGCGGGAGGT GGCTCGAGCTGGCGGAGCGAGCGGCGGCTCATGTCGGAGCTGGAGCGCACGGTGACGCCC GGCGCGGCGGAGCGCGTCATCCGCAGCTACGTCGCCTCCAAGTCGGAGCGCGCCGCCCTC GCCGCGCTCTCCCGCCTGCTCATGGACTCCGACCCCTTCGCCATCCCGTTCTACGAGGTG GTCACCCAGGCGCGGTGGTTCAAGTGGAGCTCCATCCACGCCGCCGCCGTCGCCGCGCTG CTCGAGAGCAATGGCAGCGCGGAGGAATCAAGATCCCTCATCTCCGACTCCATCTCGCGC CTCCACTCCACCTCCTCCTCCTCCGAGGAGGTGTCCCTCTTCTACTGCGACCTCATGGCG GCCTTCTCCTCCCGCGGGATGCGAGACCGGGCGATGGATTTCTACTCCCAGCTGCGAGCC TCGCCGCCGCTGTCCGGGAAGAAGACCTACACGGCGATGATAAAATCTCTGTGCCTGATG GGCCTCGCCGGCGAGGCGGAGGCGGCGCTGAGGGAGATGGCGTCTCGGGGGCACCAGCCG GAGGCGTTCCAGTTCGGATTGGTGGCGAAGTGCTACGGCAAGGCGGGATCCATGGCCGAG ATGGAGAGGGTGATCTCGTCCATGTCCGACGCCGGCATCCGCCTCGGCACCGGCGCGGCG AACATCGTGCTCTCGTGCTACACCTCCTGCCGTGACCATTCCAGGATGCTGGCATGGCTG AGGAGGATGAGGAAGCTGCGGATTGCGCCGACGACGAAGGCCTTCAACTTTGTGCTCAAC TCATGCCCAACAGTAGCTTCGATGGCTCAAGAATTGGGGGAATCACTGCCATTGTCAACG GCTGAGTTGGTCAAGAAGCTCAGGTCTGCATCTCAATGGCCAGCAGAAGCTGAGCTGGTG CAGGAGCTCCTGACATCCTCTTCGGTGCTCGACAAGGCGATGGATTGGTCGGAGTCGGAG GTGAAGCTGAACCTCCATGGATTCAGCACAATTGCAGCCTATGTTTTGATTTTGCAGTGG GTGGATGCGATGAAGGCGCGCCGCGCATTGCCATTGGAGGTGTCAGTGGTGTGTGGCATT GGCAAGCACAGCGATGTCAGAGGTGAGCCCAAGGTGAGGGAGCTGGCTCAGGAGGTTCTG AGCAGGATGGGGAGCCCCCTGAGGCTGTCCATGAGGAACAAAGGCCGGCTTGTCGCCAAG CGCGACAGGGTGAAGCAATGGCTGGCCACTGACTGGAGCTCTCCGGTGGATGAGGAGAGC ACAGATCAATCACCTAATGGGGACAACCAGCAACCATTTTTACTTACACTCATGAGAAAA CTAGGACAGGTTCTGTCACCATTTCTGCAGTTCTCAAAGGGTAAAGCATAA

Peptide Sequence

PEP ID	Os02t0120000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:1047669:1050120:-1 gene:Os02g0120000 transcript:Os02t0120000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0120000-01)
Sequence	MAVAVAASLSTPAPSPAAGGRGRRRVNVAVASLRRAAAGGGSSWRSERRLMSELERTVTP GAAERVIRSYVASKSERAALAALSRLLMDSDPFAIPFYEVVTQARWFKWSSIHAAAVAAL LESNGSAEESRSLISDSISRLHSTSSSSEEVSLFYCDLMAAFSSRGMRDRAMDFYSQLRA SPPLSGKKTYTAMIKSLCLMGLAGEAEAALREMASRGHQPEAFQFGLVAKCYGKAGSMAE MERVISSMSDAGIRLGTGAANIVLSCYTSCRDHSRMLAWLRRMRKLRIAPTTKAFNFVLN SCPTVASMAQELGESLPLSTAELVKKLRSASQWPAEAELVQELLTSSSVLDKAMDWSESE VKLNLHGFSTIAAYVLILQWVDAMKARRALPLEVSVVCGIGKHSDVRGEPKVRELAQEVL SRMGSPLRLSMRNKGRLVAKRDRVKQWLATDWSSPVDEESTDQSPNGDNQQPFLLTLMRK LGQVLSPFLQFSKGKA

Transcript Sequence

Transcript ID	Os02t0120000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:1047669:1050120:-1 gene:Os02g0120000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0120000-01)
Sequence	ATCTTGTGACGCGCCAACCGCGTCGCTCGCGAGCAGCGCAGCAGCCAGCCATGGCGGTGG CGGTGGCGGCGTCGCTCTCGACCCCGGCGCCATCGCCGGCGGCCGGGGGGAGGGGCCGGA GGAGGGTGAACGTGGCGGTGGCGTCCCTGCGGCGGGCGGCGGCGGGAGGTGGCTCGAGCT GGCGGAGCGAGCGGCGGCTCATGTCGGAGCTGGAGCGCACGGTGACGCCCGGCGCGGCGG AGCGCGTCATCCGCAGCTACGTCGCCTCCAAGTCGGAGCGCGCCGCCCTCGCCGCGCTCT CCCGCCTGCTCATGGACTCCGACCCCTTCGCCATCCCGTTCTACGAGGTGGTCACCCAGG CGCGGTGGTTCAAGTGGAGCTCCATCCACGCCGCCGCCGTCGCCGCGCTGCTCGAGAGCA ATGGCAGCGCGGAGGAATCAAGATCCCTCATCTCCGACTCCATCTCGCGCCTCCACTCCA CCTCCTCCTCCTCCGAGGAGGTGTCCCTCTTCTACTGCGACCTCATGGCGGCCTTCTCCT CCCGCGGGATGCGAGACCGGGCGATGGATTTCTACTCCCAGCTGCGAGCCTCGCCGCCGC TGTCCGGGAAGAAGACCTACACGGCGATGATAAAATCTCTGTGCCTGATGGGCCTCGCCG GCGAGGCGGAGGCGGCGCTGAGGGAGATGGCGTCTCGGGGGCACCAGCCGGAGGCGTTCC AGTTCGGATTGGTGGCGAAGTGCTACGGCAAGGCGGGATCCATGGCCGAGATGGAGAGGG TGATCTCGTCCATGTCCGACGCCGGCATCCGCCTCGGCACCGGCGCGGCGAACATCGTGC TCTCGTGCTACACCTCCTGCCGTGACCATTCCAGGATGCTGGCATGGCTGAGGAGGATGA GGAAGCTGCGGATTGCGCCGACGACGAAGGCCTTCAACTTTGTGCTCAACTCATGCCCAA CAGTAGCTTCGATGGCTCAAGAATTGGGGGAATCACTGCCATTGTCAACGGCTGAGTTGG TCAAGAAGCTCAGGTCTGCATCTCAATGGCCAGCAGAAGCTGAGCTGGTGCAGGAGCTCC TGACATCCTCTTCGGTGCTCGACAAGGCGATGGATTGGTCGGAGTCGGAGGTGAAGCTGA ACCTCCATGGATTCAGCACAATTGCAGCCTATGTTTTGATTTTGCAGTGGGTGGATGCGA TGAAGGCGCGCCGCGCATTGCCATTGGAGGTGTCAGTGGTGTGTGGCATTGGCAAGCACA GCGATGTCAGAGGTGAGCCCAAGGTGAGGGAGCTGGCTCAGGAGGTTCTGAGCAGGATGG GGAGCCCCCTGAGGCTGTCCATGAGGAACAAAGGCCGGCTTGTCGCCAAGCGCGACAGGG TGAAGCAATGGCTGGCCACTGACTGGAGCTCTCCGGTGGATGAGGAGAGCACAGATCAAT CACCTAATGGGGACAACCAGCAACCATTTTTACTTACACTCATGAGAAAACTAGGACAGG TTCTGTCACCATTTCTGCAGTTCTCAAAGGGTAAAGCATAAGAGAAGCACCTCTCTTATG TAGGTTTTTCAGATAGTTTGGTCTTTGGATAGTTCAGCATCTTTGCCATGCTGTAGATTG ATACAAGCATTGTCTTGGTCTAGTGAATCCTAAGTTCTAGTTCTGATGCCGAAATGCTAT GCGTCGGCCAGCTGCTTGAAGGTTATGGGACTGACAAACCGTGCTGCCCCGTCATAGAAG GCAAGGCCTACAATCTTGGAGGTGGCCTGGGTAGGGTGGAGGAGATCCCAGAAGAGATAT CTGCTACGGTCAGCGCAGCAGCTGGAGCTGGGGGTACAGGCTTCCTCGGCGTTGAACTTG CCACCACCACCACAGCATGCACTCTTCACCTCTACAAACCCTGAAATCAATCAGCAAGTC TGTGAGATCTCAGATATAGCTGAAAAGTAGACGGTTACAATTCAATTCATGCTAAGTAGA ACTGTGACAATGTTTGAGGTGTGAGTTCCAGGTCATATTACTCTTTGCTTAAACTGAGGT AACTTACCAGCAGCTTGTGGATTTTCAATTAGGCTGGAGATAAGTTCATAGGAGCTGGCA ATGGAGTACTTCATTCCCTGCATTTCGGAGCTGAGGTCACGGAACAGGTCCCGGATTTCG CCGTTCAGTCTCTTGGCCAACTGGTTTAGCGGTTCGAAGCACTCTCCGGTCGGGTTCTGA CTTCTCAAATATGGGCAGCACCCGAGTAATGGCACATTGATCACTGCAAACTTCCTTGCT CCTAAATTGTATAATGTCTACAAGAATACTTCAACAGTTACTAACTTAATAAAACATAAT TTGTTTGCCAGC