Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0119300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1017511:1021998:1 gene:Os02g0119300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M14, carboxypeptidase A family protein. (Os02t0119300-01)
Sequence

ATGGCTGCCTCCTCCGCCCCACCTCCCCCTCCCCGCCGCCTCCTCGCTCTCACCATGGCG
CTCGCCGCCGCCGTCGTATCCGCCGCCTCCGCCGCGAGGGCCCCGGCCTCCGTCACCCCG
ATCTCCCGCACCCTCTACCACTCCAGTGATTCCCTTCTGAGTGATATCAAGGCCTTGGTT
GCCCGGCATCCAGACAAGTTGAGTATGGATACCATAACAGCAAGTAACAAAGGGTATTCC
ACAGACCTCTTTATCGTTACTTTTAATCATGCCAAGGAGAGCACGTCCAATTCTTCAAAG
ATCCATGTCCTTCTGAGCTTTGGGCAGCATGGCAGAGAGCTTATCACTTCTGAAGTTGCA
TTAAACCTCCTCTATATTTTGACCGAGAAGCGGAAAATTGCTGGTGTCGATCTATCATCC
TTTGAGAAGATACTGGAGAATCTTGTAATCAAAGTGGTGCCCATGGAAAATTTAAATGGT
CGAAAACGTGTTGAAGAAGGGGAGCTTTGTGATAGGAGAAATGGAAGAGGAGTTGATCTT
AATAGAAATTGGAGTGTTGATTGGGGAAAGAAGGAAAAGGACTACGACCCATATGAGGAA
AATCCTGGCACTGCTCCTTTTAGCGAACCTGAGGCTCAGATCATGCGAGAGCTATCCAAG
TCATTTAAACCACATATGTGGGTGAATGTGCATTCCGGAATGGAGGCCTTATTTATGCCA
TATGACCATAAGAATACTACACCAAACGGAGCATCTGCTCATTTGATGAGGACAGTTTTG
GAGAATTTGAATCATCGCCATTTCCAAGATAGCTGCCTTGTTGGATCAGGTGGTGGAGCT
GTGGGGTATCTTGCACATGGCACCACAACTGATTACATGTACGACATTGTAAAGGTGCCT
ATGCCCTTTACCTTTGAGATTTATGGTGATGAGAAAGCATCTACCAGCGATTGCTTCAAG
ATGTTCAATCCCGTTGACAAGACAACATTCGATCGAGTCATTAATAAGTGGTGCATGGCC
TTCCTTATACTTTTTGAGGAAGGACTGCGAAACCTGCGTGAAGCTCAATTAGTATCCCAA
GGTGCAGTGGATAACTGGGTCCCAATGGGAGGAGACATTGTTGAGATAAGTGCGGCACGA
AAGAGCAGTCCCGATAAGAGGAAACTTGAAGGCCTTGACCTTGGAATGCAGGAACTAAGA
ACCTACTTTAGACTATTCATGCTATCAACAGTCCTGCTGATGTTCATGTTCTGTTCGAGG
ATATCAAAGAACAGGAACAGAGAAACAGGTAACATTTTTGACTCCTGA

Peptide Sequence

PEP ID

Os02t0119300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1017511:1021998:1 gene:Os02g0119300 transcript:Os02t0119300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M14, carboxypeptidase A family protein. (Os02t0119300-01)
Sequence

MAASSAPPPPPRRLLALTMALAAAVVSAASAARAPASVTPISRTLYHSSDSLLSDIKALV
ARHPDKLSMDTITASNKGYSTDLFIVTFNHAKESTSNSSKIHVLLSFGQHGRELITSEVA
LNLLYILTEKRKIAGVDLSSFEKILENLVIKVVPMENLNGRKRVEEGELCDRRNGRGVDL
NRNWSVDWGKKEKDYDPYEENPGTAPFSEPEAQIMRELSKSFKPHMWVNVHSGMEALFMP
YDHKNTTPNGASAHLMRTVLENLNHRHFQDSCLVGSGGGAVGYLAHGTTTDYMYDIVKVP
MPFTFEIYGDEKASTSDCFKMFNPVDKTTFDRVINKWCMAFLILFEEGLRNLREAQLVSQ
GAVDNWVPMGGDIVEISAARKSSPDKRKLEGLDLGMQELRTYFRLFMLSTVLLMFMFCSR
ISKNRNRETGNIFDS

Transcript Sequence

Transcript ID

Os02t0119300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1017511:1021998:1 gene:Os02g0119300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M14, carboxypeptidase A family protein. (Os02t0119300-01)
Sequence

TTGGTAAATCTGGAGAGCGACTGACAAAGGGGGGACGCGGCCCCGACTCGGCGACTCCGA
CCGACGAGATCGCCGTCGCTCCATCCCCCATGGCTGCCTCCTCCGCCCCACCTCCCCCTC
CCCGCCGCCTCCTCGCTCTCACCATGGCGCTCGCCGCCGCCGTCGTATCCGCCGCCTCCG
CCGCGAGGGCCCCGGCCTCCGTCACCCCGATCTCCCGCACCCTCTACCACTCCAGTGATT
CCCTTCTGAGTGATATCAAGGCCTTGGTTGCCCGGCATCCAGACAAGTTGAGTATGGATA
CCATAACAGCAAGTAACAAAGGGTATTCCACAGACCTCTTTATCGTTACTTTTAATCATG
CCAAGGAGAGCACGTCCAATTCTTCAAAGATCCATGTCCTTCTGAGCTTTGGGCAGCATG
GCAGAGAGCTTATCACTTCTGAAGTTGCATTAAACCTCCTCTATATTTTGACCGAGAAGC
GGAAAATTGCTGGTGTCGATCTATCATCCTTTGAGAAGATACTGGAGAATCTTGTAATCA
AAGTGGTGCCCATGGAAAATTTAAATGGTCGAAAACGTGTTGAAGAAGGGGAGCTTTGTG
ATAGGAGAAATGGAAGAGGAGTTGATCTTAATAGAAATTGGAGTGTTGATTGGGGAAAGA
AGGAAAAGGACTACGACCCATATGAGGAAAATCCTGGCACTGCTCCTTTTAGCGAACCTG
AGGCTCAGATCATGCGAGAGCTATCCAAGTCATTTAAACCACATATGTGGGTGAATGTGC
ATTCCGGAATGGAGGCCTTATTTATGCCATATGACCATAAGAATACTACACCAAACGGAG
CATCTGCTCATTTGATGAGGACAGTTTTGGAGAATTTGAATCATCGCCATTTCCAAGATA
GCTGCCTTGTTGGATCAGGTGGTGGAGCTGTGGGGTATCTTGCACATGGCACCACAACTG
ATTACATGTACGACATTGTAAAGGTGCCTATGCCCTTTACCTTTGAGATTTATGGTGATG
AGAAAGCATCTACCAGCGATTGCTTCAAGATGTTCAATCCCGTTGACAAGACAACATTCG
ATCGAGTCATTAATAAGTGGTGCATGGCCTTCCTTATACTTTTTGAGGAAGGACTGCGAA
ACCTGCGTGAAGCTCAATTAGTATCCCAAGGTGCAGTGGATAACTGGGTCCCAATGGGAG
GAGACATTGTTGAGATAAGTGCGGCACGAAAGAGCAGTCCCGATAAGAGGAAACTTGAAG
GCCTTGACCTTGGAATGCAGGAACTAAGAACCTACTTTAGACTATTCATGCTATCAACAG
TCCTGCTGATGTTCATGTTCTGTTCGAGGATATCAAAGAACAGGAACAGAGAAACAGGTA
ACATTTTTGACTCCTGAAAACCCATAAAAAGGAATAGATTGAAGCTCGCTGTTCAGTTTG
AGTTTCGGATTTGGTTGTGGCAAGAGTGATCACCATTTGTTGCCTCAGATGAACAAAGTG
CATGAACCATTCGAACTTTGGAGGAAACTTATGCGGTTTACCGCTTGGAGATCCACCGAT
TTGGGAGGCGACATGGCTGGCAGAGTTCAGAATGGCATTGTGCAGTCTATGTTTAGATAC
GAGATGCATGTCGAATGATTTGTTTTTACCTTCAACAAATCATACTAGCTGTAAGTTGTA
AAGCTGTCCATATCAGTTCATTGTGATGAATAGGCATTCCTTCACTTTTTGAAGGCTAGT
GCACAAACAACATCTTGTTAACGTTGAATATTTGACACAATTAAATGTACTATTCCCCTT
CTCG