Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0118400-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:961549:965543:1 gene:Os02g0118400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STLP4 description:Similar to CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). (Os02t0118400-01);Similar to CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). (Os02t0118400-02)
Sequence

ATGCGGGTGCTCCCCCTCGCGCTCGCCGCCGCCATCTTCTCCGGCGTCACCGCCATCCTC
GTCTACCTCTCCGGCCTCTCCTCATATGGCGGCGCTAGGGTTTCCGATGCGGACTTGGCG
GCGCTGGGCGCGCTGCAGAGCGGCTTCAGCAAGTGTGTGGATGCAAATGGTCTAGGGCTG
AAAGCAATTCCAGGAGAGGATTACTGTCGAGTTGTAATACAGTATCCAAGCGACACAGAT
TCTAAGTGGAAAGATCCAAAAACTGGAGAACCTGAAGGTTTATCATTTGAGTTCAATCTC
TGTGAAGCTGTGGCTTCATGGGAGCAGGTTCGCAATAGCACAACAATACTTACAAAGGAG
TACATCGATGCGTTGCCAAATGGTTGGGAGGAGTATGCATGGCGCAGGATCAATAAAGGA
ATCCATCTGAACAAGTGCCAGAACAGGACTCTTTGCATGGAAAAACTTTCATTAGTTCTT
CCTGAGACACCACCATATGTACCTCGGCAATTTGGTAGATGTGCTGTAGTTGGAAACTCT
GGGGATCTTCTTAAAACCAAATTTGGGGATGAAATTGATTCTTATGATGTCGTTATTAGA
GAGAACGGTGCACCCATCCAGAATTATACAGAATATGTTGGGACAAAGAGTACATTTCGA
CTTCTTAACAGAGGATCTGCAAAGGCTCTAGATAAAGTTGTTGAGTTAGATGAAACAAAA
AAGGAAGCCCTTATCGTTAAGACAACAATACATGATATCATGAACCAAATGATCCGGGAA
ATTCCAATAACCAATCCAGTATACCTCATGCTAGGCACATCGTTTGGTTCCTCTGCTAAA
GGAACTGGGCTTAAGGCTCTTGAATTCGCTCTGTCTATGTGTGACAGTGTCGACATGTAT
GGATTTACAGTTGACCCAGGATACAAGGAATGGACCAGGTACTTTTCGGAGTCCAGAAAG
GGACACACTCCATTACATGGGAGAGCATATTATCAAATGATGGAATGTCTTGGTCTTGTA
AAAATCCACTCACCTATGCGAGGTGATCCTGGCAGAGTAGTAAAGTGGGCTCCAACCAAG
GACACCATTGAAGCTGCTAGGGTTGCTTCTGAGAAACTGTTGAAGAGACCTGGGGCTGGA
AGCGAGGGCCCTTTGAGCTCTTGCACCATGATAAAGAAGCGCGAGAAAGGGAAGACACCA
AAAAGATCTGTTGTCCGCCATGCTGCCTTGAAGCATCTGGAGTACATGAGAGGTGCCACC
AGGTACCCTCTGGAGCGGAATGCTGGGGGTGGTTACCTCTGCATGATCAACGAAAGATAG

Peptide Sequence

PEP ID

Os02t0118400-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:961549:965543:1 gene:Os02g0118400 transcript:Os02t0118400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STLP4 description:Similar to CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). (Os02t0118400-01);Similar to CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). (Os02t0118400-02)
Sequence

MRVLPLALAAAIFSGVTAILVYLSGLSSYGGARVSDADLAALGALQSGFSKCVDANGLGL
KAIPGEDYCRVVIQYPSDTDSKWKDPKTGEPEGLSFEFNLCEAVASWEQVRNSTTILTKE
YIDALPNGWEEYAWRRINKGIHLNKCQNRTLCMEKLSLVLPETPPYVPRQFGRCAVVGNS
GDLLKTKFGDEIDSYDVVIRENGAPIQNYTEYVGTKSTFRLLNRGSAKALDKVVELDETK
KEALIVKTTIHDIMNQMIREIPITNPVYLMLGTSFGSSAKGTGLKALEFALSMCDSVDMY
GFTVDPGYKEWTRYFSESRKGHTPLHGRAYYQMMECLGLVKIHSPMRGDPGRVVKWAPTK
DTIEAARVASEKLLKRPGAGSEGPLSSCTMIKKREKGKTPKRSVVRHAALKHLEYMRGAT
RYPLERNAGGGYLCMINER

Transcript Sequence

Transcript ID

Os02t0118400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:961549:965543:1 gene:Os02g0118400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STLP4 description:Similar to CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). (Os02t0118400-01);Similar to CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). (Os02t0118400-02)
Sequence

CTCTCACACTCGACTCCGGCGAGAGCACGGGGGCCAAAGCCGGCAGAGCGCGGCTAGGGC
TTCGGCTGCTCCGGCCATGCGGGTGCTCCCCCTCGCGCTCGCCGCCGCCATCTTCTCCGG
CGTCACCGCCATCCTCGTCTACCTCTCCGGCCTCTCCTCATATGGCGGCGCTAGGGTTTC
CGATGCGGACTTGGCGGCGCTGGGCGCGCTGCAGAGCGGCTTCAGCAAGTGTGTGGATGC
AAATGGTCTAGGGCTGAAAGCAATTCCAGGAGAGGATTACTGTCGAGTTGTAATACAGTA
TCCAAGCGACACAGATTCTAAGTGGAAAGATCCAAAAACTGGAGAACCTGAAGGTTTATC
ATTTGAGTTCAATCTCTGTGAAGCTGTGGCTTCATGGGAGCAGGTTCGCAATAGCACAAC
AATACTTACAAAGGAGTACATCGATGCGTTGCCAAATGGTTGGGAGGAGTATGCATGGCG
CAGGATCAATAAAGGAATCCATCTGAACAAGTGCCAGAACAGGACTCTTTGCATGGAAAA
ACTTTCATTAGTTCTTCCTGAGACACCACCATATGTACCTCGGCAATTTGGTAGATGTGC
TGTAGTTGGAAACTCTGGGGATCTTCTTAAAACCAAATTTGGGGATGAAATTGATTCTTA
TGATGTCGTTATTAGAGAGAACGGTGCACCCATCCAGAATTATACAGAATATGTTGGGAC
AAAGAGTACATTTCGACTTCTTAACAGAGGATCTGCAAAGGCTCTAGATAAAGTTGTTGA
GTTAGATGAAACAAAAAAGGAAGCCCTTATCGTTAAGACAACAATACATGATATCATGAA
CCAAATGATCCGGGAAATTCCAATAACCAATCCAGTATACCTCATGCTAGGCACATCGTT
TGGTTCCTCTGCTAAAGGAACTGGGCTTAAGGCTCTTGAATTCGCTCTGTCTATGTGTGA
CAGTGTCGACATGTATGGATTTACAGTTGACCCAGGATACAAGGAATGGACCAGGTACTT
TTCGGAGTCCAGAAAGGGACACACTCCATTACATGGGAGAGCATATTATCAAATGATGGA
ATGTCTTGGTCTTGTAAAAATCCACTCACCTATGCGAGGTGATCCTGGCAGAGTAGTAAA
GTGGGCTCCAACCAAGGACACCATTGAAGCTGCTAGGGTTGCTTCTGAGAAACTGTTGAA
GAGACCTGGGGCTGGAAGCGAGGGCCCTTTGAGCTCTTGCACCATGATAAAGAAGCGCGA
GAAAGGGAAGACACCAAAAAGATCTGTTGTCCGCCATGCTGCCTTGAAGCATCTGGAGTA
CATGAGAGGTGCCACCAGGTACCCTCTGGAGCGGAATGCTGGGGGTGGTTACCTCTGCAT
GATCAACGAAAGATAGACATATAGCTGCCCATATTCTAGGAGTGGCTGAATTCATGGTAC
CATGAAGCAGAACACTGTACCCCGATGAATGAATCCTACACGGATAAACTATTTTGAGGG
AACATTGGTGCTCATTTTTGTACAGAGCCGGCAGTTGAGATGATTTTACGCATGAGTAGT
CACAATGTGTTGTAACTTACATTGAAACTACACAAGTGTTGTGTGATGGAATGAACAGAT
AGCGGGGCAGTTTGCTGCGCAATGCATCGGGTCGCCAAATTTGTCACCTGTAACTAGAAG
AAATCTTAACTATGTACATGGAGCCTGTAATTCGTTTGGCAGTAGACATGCACTATTTGA
TTGGCATGATGGCATCACATTCTGGAACTTACTATGTCTTAACTTGCATAGATATGTTGA
CCAACAACTTGAGGCAAATCATTAGTATACAAATGATCTCTCTGATACTATTTCCAATC