Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0118000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:938375:941300:-1 gene:Os02g0118000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0118000-01)
Sequence	ATGTCACTGGTTAACCGGCCGCTCCCTGCACTGTATGGAATTTGCACGGCCTCGGCGAAG ACCAGAGCTTGGTGGCTCTGCAGAGATGGCAATCTCCCATCAACAAGTCGAATTTCTTGC ACAGAGCCATCGAATGGGGGTTCTGTCATGGAGTTGGAGGTAATGGACCGCAATGAGCAG ACATACCATGAGAATTCTTCTGCTTCTGAGGATGAGGACGATGATGAGGAAGAGGCTGTA GAGTGGAGCAAAGATGAGCTTGATGCCATCTCGGCACTCTTTGACCGGCCGATGCGCCAG AAGCCACCAAAGCCGCCAAACCCGGTGAGGCAGCGACCTCTCCCGCTGCCACTGCCTCAC AAGACACGACTGCCCAATGCTCCTGCACCAAAGCAGCATATCAGGCTGGCAGCAAGGGCT GCACTTTCTTCACGCTCTTCATTCAGTGACCAGGTGTGCAAGAACCCGGAGGTCCTCATT GGGATTGCCCGGGAGATTGCAGCGCTGCCACCGGAGTCTGACGTGTCCATTGTGCTCGAT CGGTGGGTTCGGTTCCTCCGGAAAGGATCCTTGTCAATGACCATTCGGGAGCTTGGGCAC ATGGGGCTCCCAGAGAGGGCATTGCAGACACTTTGCTGGGCTCAGAGGCAGACTGTCGTG CCACTCTTCCCCGACGACCGGATTCTCGCTTCGACAATTGAGGTCTTGGCACGCTTCGAC CAGCTGAAGATGGAGGATGCGCTAGAGCAGTGCGTCCCTTCAGCGAGCCGTGCTGTTCTT GAAGCCATGGTCAGTGGGTTCATCAGGGCAGGTAAAGTAGGCCTTGCCCGAAAACTCCTC GAGTTCGCCACGATCAACAAGAGGACACTGAGCCCGAGCGTCCACGTGAAGCTGATGCTG GAGGCCGTCCGTACGCCTGAGGGCTACGGGCTCGCCGCGGCGCTGCTGGACGAGCTCGGC GAGAGGCCGGAGCTGCACGTTCGGCAGCAGGACTGCACGGCCGTGATGAAGGTGTGCGTG AAGCTCCGGCGGTACGCCGCCGTGGAGAGCCTGTTCGGCTGGTTCAGGGACACCGGCGGG AGGCCCACGGTGGTGATGTACACGGCGGTGATCCACAGCCGGTGCCGCGACGGGCGGCAC CGGGAGGCGCTGTCCCTGGCGTGGGAGATGGAGCGGCACGCCGGCGGCCTCCTCGACCTG CCGGCGTACCGGGTGCTGGTGAAGCTGTGCGTGGCGTTGCGCGACCACGAGAGGGGCGTC CGGTACTTGGCGAGGATGAAGGACGCCGGGTTCGTCCCGACCGGCGACATGTACGGCGGC CTGATCGGAGGCTACGCGGCGGAGGGGAGGATGGGCAGGTGCCGGAGGCTGATCAGGGAG GCGGAGTTGGCCGGCGTGAAGCTGGAGAGGAGGCTGCTTTCGCGCTTGTCTGAGATGGGG GTTGAGCATTCTCAGCTCTGA

Peptide Sequence

PEP ID	Os02t0118000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:938375:941300:-1 gene:Os02g0118000 transcript:Os02t0118000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0118000-01)
Sequence	MSLVNRPLPALYGICTASAKTRAWWLCRDGNLPSTSRISCTEPSNGGSVMELEVMDRNEQ TYHENSSASEDEDDDEEEAVEWSKDELDAISALFDRPMRQKPPKPPNPVRQRPLPLPLPH KTRLPNAPAPKQHIRLAARAALSSRSSFSDQVCKNPEVLIGIAREIAALPPESDVSIVLD RWVRFLRKGSLSMTIRELGHMGLPERALQTLCWAQRQTVVPLFPDDRILASTIEVLARFD QLKMEDALEQCVPSASRAVLEAMVSGFIRAGKVGLARKLLEFATINKRTLSPSVHVKLML EAVRTPEGYGLAAALLDELGERPELHVRQQDCTAVMKVCVKLRRYAAVESLFGWFRDTGG RPTVVMYTAVIHSRCRDGRHREALSLAWEMERHAGGLLDLPAYRVLVKLCVALRDHERGV RYLARMKDAGFVPTGDMYGGLIGGYAAEGRMGRCRRLIREAELAGVKLERRLLSRLSEMG VEHSQL

Transcript Sequence

Transcript ID	Os02t0118000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:938375:941300:-1 gene:Os02g0118000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0118000-01)
Sequence	GCATTTTTTGACGGCATCTCATCCAGGAGCCCAGGTCGGCGCCGCCGCACACGCGTGGCG GCCTCGCCGGCGACTCGGCTGCTCAGAGCGGCGCGAAGAAAGGCCGCGCTGGAGTCTGCA GCCGCTGCGTGTGGCAGAGTAGAGACCAGCCAGGGAGAGCGCAGCTGTCAGCAACCTATA CCAGCCAGTGAGCTTGCTCGCGCCGTTCGCCGGGGCGGGGGAAGAGAACCATCTGGCGAC AAAGCACAGGAAGCATGTCACTGGTTAACCGGCCGCTCCCTGCACTGTATGGAATTTGCA CGGCCTCGGCGAAGACCAGAGCTTGGTGGCTCTGCAGAGATGGCAATCTCCCATCAACAA GTCGAATTTCTTGCACAGAGCCATCGAATGGGGGTTCTGTCATGGAGTTGGAGGTAATGG ACCGCAATGAGCAGACATACCATGAGAATTCTTCTGCTTCTGAGGATGAGGACGATGATG AGGAAGAGGCTGTAGAGTGGAGCAAAGATGAGCTTGATGCCATCTCGGCACTCTTTGACC GGCCGATGCGCCAGAAGCCACCAAAGCCGCCAAACCCGGTGAGGCAGCGACCTCTCCCGC TGCCACTGCCTCACAAGACACGACTGCCCAATGCTCCTGCACCAAAGCAGCATATCAGGC TGGCAGCAAGGGCTGCACTTTCTTCACGCTCTTCATTCAGTGACCAGGTGTGCAAGAACC CGGAGGTCCTCATTGGGATTGCCCGGGAGATTGCAGCGCTGCCACCGGAGTCTGACGTGT CCATTGTGCTCGATCGGTGGGTTCGGTTCCTCCGGAAAGGATCCTTGTCAATGACCATTC GGGAGCTTGGGCACATGGGGCTCCCAGAGAGGGCATTGCAGACACTTTGCTGGGCTCAGA GGCAGACTGTCGTGCCACTCTTCCCCGACGACCGGATTCTCGCTTCGACAATTGAGGTCT TGGCACGCTTCGACCAGCTGAAGATGGAGGATGCGCTAGAGCAGTGCGTCCCTTCAGCGA GCCGTGCTGTTCTTGAAGCCATGGTCAGTGGGTTCATCAGGGCAGGTAAAGTAGGCCTTG CCCGAAAACTCCTCGAGTTCGCCACGATCAACAAGAGGACACTGAGCCCGAGCGTCCACG TGAAGCTGATGCTGGAGGCCGTCCGTACGCCTGAGGGCTACGGGCTCGCCGCGGCGCTGC TGGACGAGCTCGGCGAGAGGCCGGAGCTGCACGTTCGGCAGCAGGACTGCACGGCCGTGA TGAAGGTGTGCGTGAAGCTCCGGCGGTACGCCGCCGTGGAGAGCCTGTTCGGCTGGTTCA GGGACACCGGCGGGAGGCCCACGGTGGTGATGTACACGGCGGTGATCCACAGCCGGTGCC GCGACGGGCGGCACCGGGAGGCGCTGTCCCTGGCGTGGGAGATGGAGCGGCACGCCGGCG GCCTCCTCGACCTGCCGGCGTACCGGGTGCTGGTGAAGCTGTGCGTGGCGTTGCGCGACC ACGAGAGGGGCGTCCGGTACTTGGCGAGGATGAAGGACGCCGGGTTCGTCCCGACCGGCG ACATGTACGGCGGCCTGATCGGAGGCTACGCGGCGGAGGGGAGGATGGGCAGGTGCCGGA GGCTGATCAGGGAGGCGGAGTTGGCCGGCGTGAAGCTGGAGAGGAGGCTGCTTTCGCGCT TGTCTGAGATGGGGGTTGAGCATTCTCAGCTCTGAAAGAAAGAAACTGATCTTGCTGTTG GCATCTGACTAGCATGGACATTGCACAGAAATTGAACTGTAAAATTAGGCTCTGCGTAAT TGCCTTTAACCTGTAGTAACAGAACATTACATTATGAATATATTTGTTTTGTTGTTGGCT TGTTATCCTC