Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0117800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:930302:934270:-1 gene:Os02g0117800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 5 description:Similar to APG5 (Autophagy 5) like protein. (Os02t0117800-01)
Sequence	ATGGCGGCGCAGCGCGACGACGAGGCCGGGTGGTCGGCGGAGGCGGCGCGGCGGGTCTGG GGCGGCGCCGTGCCGCTCCAGGTCCACCTCCACGACGCCGACGTCACCACCCTCCCCCCA CCTCCGCCCTTCCTGACTTTGGGGCCAAGAATCGGGTATCTTCCACTGTTGGTACCAATT ATAAAGGCTCATTTTAGCAGCACACTCCCGCCTGGTATTGACACTGTTTGGTTTGAATAC AAAGGGCTGCCCTTAAAATGGTATATACCCATTGGAGTTCTTTACGACCTTCTATGTGCA GATCCAGAAAGACCATGGAATCTAACAGTTCATTTTAGGGGATATCCTTCTGAAATTTTA ACTCTCTGTGATGGCGAAGATAGTGTAAAGTGGAGCTACATGAATTCCCTGAAAGAGGCT GCCTTCATCATCACTGGCAACAGTAAGAATGTGATGAATATGTCTCAGGCTGATCAAGGT GCTTTGTGGCAATCAGTAATGAAAGGTAACTTAGATGGGTATATGAATATCTCCACCAGG CTTAAGCTTGGACCATTCGAAGAGGATTGCTTAGTACGAACTTCCTCAGTAGAGGGTCAA CAAGGTTCTGATGAGCCTGAATCTCCTGGATCTGGCAAACCATGCAGGGTTCCTGTTCGA TTATATGTGCGCAGTGTTCAAGAAGACCTTTATGATTTAGAAGATGCACTACCTGTTGGT GATTGGGAAAGCATATCCTATATTAACCGACCATTCGAAGTACGGAGGGAGGAAGGTAGA AGCTACATCACCCTGGAACATGCGTTGAAAACTTTGCTACCTGAGTTCTTCAGCTCGAAG GCATCACGTATACCCGACGATTCCGAAACTGCTCCTCAGGCACCAGATTCAGCCCCTAAT GATGATTCTGATGTCACCCCAAGAAGTTGTGAGAAGTTAGAGTCGTCTGCTTCGTCGAGC CCGCAAGAGGCGAATGTGGCCAACAAGGGTAAAATAGTGAAGCTAGTAAGGGTGCAAGGC ATTGAGGTCGACATGGACATACCTTTCCTTTGGGTTGCCAACAACCTGAAGAACCCTGAA TGTTACCTCCATATTTGTGTGTATGTCGGTACAAGAAAACGAGAGCCTAAGGATGGTAGA TGA

Peptide Sequence

PEP ID	Os02t0117800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:930302:934270:-1 gene:Os02g0117800 transcript:Os02t0117800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 5 description:Similar to APG5 (Autophagy 5) like protein. (Os02t0117800-01)
Sequence	MAAQRDDEAGWSAEAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPI IKAHFSSTLPPGIDTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEIL TLCDGEDSVKWSYMNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTR LKLGPFEEDCLVRTSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVG DWESISYINRPFEVRREEGRSYITLEHALKTLLPEFFSSKASRIPDDSETAPQAPDSAPN DDSDVTPRSCEKLESSASSSPQEANVANKGKIVKLVRVQGIEVDMDIPFLWVANNLKNPE CYLHICVYVGTRKREPKDGR

Transcript Sequence

Transcript ID	Os02t0117800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:930302:934270:-1 gene:Os02g0117800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 5 description:Similar to APG5 (Autophagy 5) like protein. (Os02t0117800-01)
Sequence	AAGCAAAAACCATCAAAGATTAGGCGGCGGCGGCGGCAGATCTCTCCTCCGGCGGCAATG GCGGCGCAGCGCGACGACGAGGCCGGGTGGTCGGCGGAGGCGGCGCGGCGGGTCTGGGGC GGCGCCGTGCCGCTCCAGGTCCACCTCCACGACGCCGACGTCACCACCCTCCCCCCACCT CCGCCCTTCCTGACTTTGGGGCCAAGAATCGGGTATCTTCCACTGTTGGTACCAATTATA AAGGCTCATTTTAGCAGCACACTCCCGCCTGGTATTGACACTGTTTGGTTTGAATACAAA GGGCTGCCCTTAAAATGGTATATACCCATTGGAGTTCTTTACGACCTTCTATGTGCAGAT CCAGAAAGACCATGGAATCTAACAGTTCATTTTAGGGGATATCCTTCTGAAATTTTAACT CTCTGTGATGGCGAAGATAGTGTAAAGTGGAGCTACATGAATTCCCTGAAAGAGGCTGCC TTCATCATCACTGGCAACAGTAAGAATGTGATGAATATGTCTCAGGCTGATCAAGGTGCT TTGTGGCAATCAGTAATGAAAGGTAACTTAGATGGGTATATGAATATCTCCACCAGGCTT AAGCTTGGACCATTCGAAGAGGATTGCTTAGTACGAACTTCCTCAGTAGAGGGTCAACAA GGTTCTGATGAGCCTGAATCTCCTGGATCTGGCAAACCATGCAGGGTTCCTGTTCGATTA TATGTGCGCAGTGTTCAAGAAGACCTTTATGATTTAGAAGATGCACTACCTGTTGGTGAT TGGGAAAGCATATCCTATATTAACCGACCATTCGAAGTACGGAGGGAGGAAGGTAGAAGC TACATCACCCTGGAACATGCGTTGAAAACTTTGCTACCTGAGTTCTTCAGCTCGAAGGCA TCACGTATACCCGACGATTCCGAAACTGCTCCTCAGGCACCAGATTCAGCCCCTAATGAT GATTCTGATGTCACCCCAAGAAGTTGTGAGAAGTTAGAGTCGTCTGCTTCGTCGAGCCCG CAAGAGGCGAATGTGGCCAACAAGGGTAAAATAGTGAAGCTAGTAAGGGTGCAAGGCATT GAGGTCGACATGGACATACCTTTCCTTTGGGTTGCCAACAACCTGAAGAACCCTGAATGT TACCTCCATATTTGTGTGTATGTCGGTACAAGAAAACGAGAGCCTAAGGATGGTAGATGA AATGTTAGAAACACAATAGGGAGAGCGCATTCCAGGAAAAATCTGGTCTTGGTTCTCATC TTGGATGACTCCTAGACATTAATATTAATTCTTTGTACAGATGCTGAAATCTTAATACGT TTTGACGTGCTGATCAATTGGTGTAAGATATTGGATTGG