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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0117600-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:924566:926386:1 gene:Os02g0117600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 18 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os02t0117600-01);Similar to F2D10.32. (Os02t0117600-02)
Sequence

ATGGCTTCCTCTTCCCTCCCTTCTAGAACCTTCTACCGCCACTCGCTTCCCTCCTCCGCA
CCTCCACCTCCTTCGAGAGGGGCCTGCGCCGCCGCATGCTGCTGCCTCCGCGCGGCCGTC
TCCCGGCGGCGGGCAGCCGCGCAGCTGCTCTCCGCCGCCGGATTCTTGATCGCCGTCTCG
CCGCCTTCGCTAGCCGCGCGGAGGGGCCGCATGGTCGTGTCGCTGGAGGACTACGTCACT
TCACCTGATGGCCTGAAGTACTATGATCTTGTTGAAGGGAAGGGTCCAACTGCTGAAAAG
GGCTCAACTGTGCAGGTCCATTTTGATTGCATATACCGTGGCATCACCGCTGTGTCAAGC
CGCGAAGCCAAACTACTGGCAGGGAACCGGAGTATTGCGCAGCCTTATGAGTTCAGTGTC
GGATCGCTGCCCGGGAAAGAGCGAAAGCGGGAATTTGTAGACAGTGCCAATGGGTTATAC
TCAGCACAGGCGTCACCGAAACCTCCTGCCGCAATGTACACAATAACTGAAGGGATGAAA
GTGGGGGGAAAGAGGAGAGTAATTGTCCCTCCAGAGCTCGGATATGGGAAAAAGGGGATG
AATGAGATACCGCCTGATGCTCCTTTTGAACTCGATATAGAGCTTTTGGAAGTTGTCCCT
CCTGCAGAGAAATGA

Peptide Sequence

PEP ID

Os02t0117600-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:924566:926386:1 gene:Os02g0117600 transcript:Os02t0117600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 18 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os02t0117600-01);Similar to F2D10.32. (Os02t0117600-02)
Sequence

MASSSLPSRTFYRHSLPSSAPPPPSRGACAAACCCLRAAVSRRRAAAQLLSAAGFLIAVS
PPSLAARRGRMVVSLEDYVTSPDGLKYYDLVEGKGPTAEKGSTVQVHFDCIYRGITAVSS
REAKLLAGNRSIAQPYEFSVGSLPGKERKREFVDSANGLYSAQASPKPPAAMYTITEGMK
VGGKRRVIVPPELGYGKKGMNEIPPDAPFELDIELLEVVPPAEK

Transcript Sequence

Transcript ID

Os02t0117600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:924566:926386:1 gene:Os02g0117600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 18 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os02t0117600-01);Similar to F2D10.32. (Os02t0117600-02)
Sequence

CTCCGTCCCCTTCCTCCGCTGGATTCCTCCATGGCTTCCTCTTCCCTCCCTTCTAGAACC
TTCTACCGCCACTCGCTTCCCTCCTCCGCACCTCCACCTCCTTCGAGAGGGGCCTGCGCC
GCCGCATGCTGCTGCCTCCGCGCGGCCGTCTCCCGGCGGCGGGCAGCCGCGCAGCTGCTC
TCCGCCGCCGGATTCTTGATCGCCGTCTCGCCGCCTTCGCTAGCCGCGCGGAGGGGCCGC
ATGGTCGTGTCGCTGGAGGACTACGTCACTTCACCTGATGGCCTGAAGTACTATGATCTT
GTTGAAGGGAAGGGTCCAACTGCTGAAAAGGGCTCAACTGTGCAGGTCCATTTTGATTGC
ATATACCGTGGCATCACCGCTGTGTCAAGCCGCGAAGCCAAACTACTGGCAGGGAACCGG
AGTATTGCGCAGCCTTATGAGTTCAGTGTCGGATCGCTGCCCGGGAAAGAGCGAAAGCGG
GAATTTGTAGACAGTGCCAATGGGTTATACTCAGCACAGGCGTCACCGAAACCTCCTGCC
GCAATGTACACAATAACTGAAGGGATGAAAGTGGGGGGAAAGAGGAGAGTAATTGTCCCT
CCAGAGCTCGGATATGGGAAAAAGGGGATGAATGAGATACCGCCTGATGCTCCTTTTGAA
CTCGATATAGAGCTTTTGGAAGTTGTCCCTCCTGCAGAGAAATGACCATTTTTGTTTGCA
ATGGATGGGGAACTTTCATGAGATATGTAACCAAATATGTTCATATGATATTTTGCCGGG
ACATGACTTGTTTGCCCACTCACAAGGAGAAAATAGAACAAGAAGCAAAGTCAAGTAGGT
AAAAGACATGTACTAATTTTGTTATTCCTTATGCCGAAGCAATATTGGATCAAAAATATT
CTCCACAATGTCGTGGAGCTTGATTGATTATATGGAATGGTGATATGATCTCTCTTTGTG
AACTCTGCATCCTTTCGCTCAAAGGTCCTCGGGGCCATTGATATCCTGAAATGAGAGAAT
ACATTTTGTTTG