Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0117500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:918797:923968:1 gene:Os02g0117500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glutamate receptor homolog 3.1, GLUTAMATE RECEPTOR-LIKE 3.2 description:Similar to Glutamate receptor 3.3 precursor (Ligand-gated ion channel 3.3). (Os02t0117500-01)
Sequence	ATGAAGATAGGTCTGCTCATGTTGCTTGTTCTCTTCCTGGTCATGTCCCCTGATGGGATC CGCAGGAGCTTAGCCGCGAGGCCTTCTATTGTGAATATTGGGGCCATTCTTCGATTTAAC TCCACCATTGGAGGTGTTTCGATGATTGCTATCCAGGCAGCCTTGGAGGATATTAATTCT GATTCAACAATTCTAAATGGAACAACTTTAAAAGTTGACATGAGGGATACAAATTGTGAT GATGGTTTCCTTGGGATGGTTGAAGCTTTGCAGTTCATGGAGACTGATGTGATTGCAATT ATTGGCCCACAGTGCTCAACAATTGCACATATCGTTTCATATGTAGCAAATGAGCTCCGA GTCCCTCTTATGTCCTTTGCATCTGATGCAACTTTGTCATCAATTCAGTTCCCATTCTTT GTTCGAACTGCTCCCAGTGATCTCTATCAAATGGATGCTGTAGCTGCAATAGTTGACTAC TACCGTTGGAAGATAGTGACTGCTATATATATTGATGATGATTATGGCCGAAATGGAATA GCCACATTGGATGATGCACTTACTCAAAGGCGCTGCAAAATCTCCTACAAGATTGCATTT CCTGCAAATGCTAGAAAGAGCGACCTCATAAATTTATTGGTCAGCGTTAGTTATATGGAG TCTCGTGTTATCATCCTCCATACTGGTGCTGGACCTGGACTCAAGATTTTCTCTCTGGCG AACCAACTAAGCATGATGGGCAATGGCTATGTATGGATTGCAACTGATTGGCTTTCTGCT TATCTCGATGCTAATTCATCGGTTCCTGATGAGACTATGTATGGCATGCAAGGAGTTCTC ACTTTACGCCCACACATTCCTGAATCAAAGATGAAGAGTAATTTGATCTCCAAGTGGAGC AGGTTAAGCAAGAAGTACAGTTATAGTTATCTCCGCACAAGTTCATATGCTTTTTATGTT TATGATAGTGTATGGGCAGTAGCTCGGGCTTTGGATGCTTTCTTTGATGATGGTGGGAAG ATTTCCTTTTCAAATGATTCAAGGCTGCGTGATGAAACTGGAGGTACTCTTCACCTTGAA GCAATGAGTATTTTTGATATGGGAAATAACTTGTTGGAGAAGATTAGAAAGGCAAACTTC ACTGGGGTGTCTGGGCAAGTGCAATTTGATGCTACTGGTGACCTCATTCATCCTGCTTAT GATGTCATAAATATAATTGGAAATGGCATGCGGACAGTTGGCTATTGGTCAAATTATTCT AGCTTGCTGTCGACTGTCCTTCCGGAGGTTCTCTATTCAGAGCCTCCTAACAATTCTCTA GCTAATCAACATCTATATGATGTTATTTGGCCTGGGCAGACTGCACAAACGCCTCGAGGC TGGGTTTTTCCTTCTAATGCTAAGGAGTTGAAAATTGGTGTCCCCAACAGATTTAGCTTC AGAGAATTTGTCACAAAAGATAATGTTACTGGATCAATGAAGGGCTATTGCATTGATGTC TTTACTCAGGCATTGGCTTTGCTTCCTTATCCTGTTACATACAAGTTTATACCATTTGGG GGTGGTAATGAAAATCCACATTATGACAAACTCGTACAAATGGTTGAGGATAACGAGTTT GACGCAGCAATAGGGGATATTGCAATTACAATGAGCAGGACTGTAACTACTGATTTCACC CAGCCCTTCATTGAATCTGGCTTGGTTATCTTGGCTCCAGTTAAAAAACATATTGTTAAT TCCTGGGCATTCTTGCAGCCATTCACTCTTCAGATGTGGTGTGTTACTGGATTATTCTTT CTTGTTGTGGGTGCAGTTGTTTGGGTTCTTGAACATCGAATAAATGACGAATTCCGTGGC TCACCGCGAGAACAAATAATTACTATTTTCTGGTTCAGCTTTTCAACCTTGTTTTTTGCA CACAGAGAAAATACCATGAGTACCTTAGGACGTGGTGTCTTGATCATATGGCTATTTGTT GTTTTAATCATTCAATCCAGCTATACTGCAAGTCTTACTTCCATCCTGACTGTTCAACAA CTCGATACTTCTATAAGAGGAATTGATGACCTGAAAAATAGTGATGGTCCTATTGGTTTC CAAGTTGGTTCTTTTGCAGAAGAATACATGGTCAGGGAGCTGAACATCTCACGGTCGAGG CTGAGAGCTCTTGGTTCTCCAGAAGAATACGCTGAAGCGCTTAAGCATGGCCCTAAGAGA GGAGGTGTCATGGCCATTGTAGATGAGCGCCCCTACGTTGAACTGTTTTTGTCAACTTAT TGCAAGATTGCAGTTGCTGGTTCGGATTTCACCAGCAGAGGATGGGGCTTTGCATTTCCA AGAGACTCCCCTTTGCAAATTGACCTATCGACTGCGATCCTGTCACTGTCGGAGAACGGG GAACTGCAGAGGATCCATGACAAATGGCTCAAGACTAGCGAGTGCTCAGCCGACAACACC GAGTTTGTCGACTCGGATCAGCTCCGCCTTGAGAGCTTCTGGGGCCTGTTCCTCATTTGT GGTATCGCATGTGTCATCGCGCTGCTCATCTACTTTTTCACCACCGTACGCAAATTCCTC AGGCATGAACCTCCAGAAGATCCAACACCTCGTCCAGGCGGATCAACAACTCTTCCAGAC GAACGAACACCCCCAAAGAACGGACAAGAGAAATGCAACTGCAGAAATTTCATCTCATTT CTTGATCACAAGGAGCCACCAAAGAAGAAGCGGTCCTTGAGTTTGACGCCGACAACGCCA TTGAGCAACTTTACTGCCCTTGAAATAGAAGGACCTGTGAGGACAGTCAGGAATGGTAGT GTCGTTGACATATAG

Peptide Sequence

PEP ID	Os02t0117500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:918797:923968:1 gene:Os02g0117500 transcript:Os02t0117500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glutamate receptor homolog 3.1, GLUTAMATE RECEPTOR-LIKE 3.2 description:Similar to Glutamate receptor 3.3 precursor (Ligand-gated ion channel 3.3). (Os02t0117500-01)
Sequence	MKIGLLMLLVLFLVMSPDGIRRSLAARPSIVNIGAILRFNSTIGGVSMIAIQAALEDINS DSTILNGTTLKVDMRDTNCDDGFLGMVEALQFMETDVIAIIGPQCSTIAHIVSYVANELR VPLMSFASDATLSSIQFPFFVRTAPSDLYQMDAVAAIVDYYRWKIVTAIYIDDDYGRNGI ATLDDALTQRRCKISYKIAFPANARKSDLINLLVSVSYMESRVIILHTGAGPGLKIFSLA NQLSMMGNGYVWIATDWLSAYLDANSSVPDETMYGMQGVLTLRPHIPESKMKSNLISKWS RLSKKYSYSYLRTSSYAFYVYDSVWAVARALDAFFDDGGKISFSNDSRLRDETGGTLHLE AMSIFDMGNNLLEKIRKANFTGVSGQVQFDATGDLIHPAYDVINIIGNGMRTVGYWSNYS SLLSTVLPEVLYSEPPNNSLANQHLYDVIWPGQTAQTPRGWVFPSNAKELKIGVPNRFSF REFVTKDNVTGSMKGYCIDVFTQALALLPYPVTYKFIPFGGGNENPHYDKLVQMVEDNEF DAAIGDIAITMSRTVTTDFTQPFIESGLVILAPVKKHIVNSWAFLQPFTLQMWCVTGLFF LVVGAVVWVLEHRINDEFRGSPREQIITIFWFSFSTLFFAHRENTMSTLGRGVLIIWLFV VLIIQSSYTASLTSILTVQQLDTSIRGIDDLKNSDGPIGFQVGSFAEEYMVRELNISRSR LRALGSPEEYAEALKHGPKRGGVMAIVDERPYVELFLSTYCKIAVAGSDFTSRGWGFAFP RDSPLQIDLSTAILSLSENGELQRIHDKWLKTSECSADNTEFVDSDQLRLESFWGLFLIC GIACVIALLIYFFTTVRKFLRHEPPEDPTPRPGGSTTLPDERTPPKNGQEKCNCRNFISF LDHKEPPKKKRSLSLTPTTPLSNFTALEIEGPVRTVRNGSVVDI

Transcript Sequence

Transcript ID	Os02t0117500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:918797:923968:1 gene:Os02g0117500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glutamate receptor homolog 3.1, GLUTAMATE RECEPTOR-LIKE 3.2 description:Similar to Glutamate receptor 3.3 precursor (Ligand-gated ion channel 3.3). (Os02t0117500-01)
Sequence	ACCAGAAAATGTGCTGAAAATGAGCTTCGCGAAAGCTCACGCGGTCTTCTTCAGAGAGAG GGGTCCCTACTCCGTGTCGAGCTGAGCAGCAGCAGCAGCAGCAGCCCGCGAGCCCAAAGA TTTCCTCTTTCGTGGGGGAGACACGCCAAATCCAATCCGAGTTCTCCAACTCATCAATAA TCTGCAAGATGTGAATAAGTCTCAAGTAGACTTTGCACCATTTGAGACACAATGAAGATA GGTCTGCTCATGTTGCTTGTTCTCTTCCTGGTCATGTCCCCTGATGGGATCCGCAGGAGC TTAGCCGCGAGGCCTTCTATTGTGAATATTGGGGCCATTCTTCGATTTAACTCCACCATT GGAGGTGTTTCGATGATTGCTATCCAGGCAGCCTTGGAGGATATTAATTCTGATTCAACA ATTCTAAATGGAACAACTTTAAAAGTTGACATGAGGGATACAAATTGTGATGATGGTTTC CTTGGGATGGTTGAAGCTTTGCAGTTCATGGAGACTGATGTGATTGCAATTATTGGCCCA CAGTGCTCAACAATTGCACATATCGTTTCATATGTAGCAAATGAGCTCCGAGTCCCTCTT ATGTCCTTTGCATCTGATGCAACTTTGTCATCAATTCAGTTCCCATTCTTTGTTCGAACT GCTCCCAGTGATCTCTATCAAATGGATGCTGTAGCTGCAATAGTTGACTACTACCGTTGG AAGATAGTGACTGCTATATATATTGATGATGATTATGGCCGAAATGGAATAGCCACATTG GATGATGCACTTACTCAAAGGCGCTGCAAAATCTCCTACAAGATTGCATTTCCTGCAAAT GCTAGAAAGAGCGACCTCATAAATTTATTGGTCAGCGTTAGTTATATGGAGTCTCGTGTT ATCATCCTCCATACTGGTGCTGGACCTGGACTCAAGATTTTCTCTCTGGCGAACCAACTA AGCATGATGGGCAATGGCTATGTATGGATTGCAACTGATTGGCTTTCTGCTTATCTCGAT GCTAATTCATCGGTTCCTGATGAGACTATGTATGGCATGCAAGGAGTTCTCACTTTACGC CCACACATTCCTGAATCAAAGATGAAGAGTAATTTGATCTCCAAGTGGAGCAGGTTAAGC AAGAAGTACAGTTATAGTTATCTCCGCACAAGTTCATATGCTTTTTATGTTTATGATAGT GTATGGGCAGTAGCTCGGGCTTTGGATGCTTTCTTTGATGATGGTGGGAAGATTTCCTTT TCAAATGATTCAAGGCTGCGTGATGAAACTGGAGGTACTCTTCACCTTGAAGCAATGAGT ATTTTTGATATGGGAAATAACTTGTTGGAGAAGATTAGAAAGGCAAACTTCACTGGGGTG TCTGGGCAAGTGCAATTTGATGCTACTGGTGACCTCATTCATCCTGCTTATGATGTCATA AATATAATTGGAAATGGCATGCGGACAGTTGGCTATTGGTCAAATTATTCTAGCTTGCTG TCGACTGTCCTTCCGGAGGTTCTCTATTCAGAGCCTCCTAACAATTCTCTAGCTAATCAA CATCTATATGATGTTATTTGGCCTGGGCAGACTGCACAAACGCCTCGAGGCTGGGTTTTT CCTTCTAATGCTAAGGAGTTGAAAATTGGTGTCCCCAACAGATTTAGCTTCAGAGAATTT GTCACAAAAGATAATGTTACTGGATCAATGAAGGGCTATTGCATTGATGTCTTTACTCAG GCATTGGCTTTGCTTCCTTATCCTGTTACATACAAGTTTATACCATTTGGGGGTGGTAAT GAAAATCCACATTATGACAAACTCGTACAAATGGTTGAGGATAACGAGTTTGACGCAGCA ATAGGGGATATTGCAATTACAATGAGCAGGACTGTAACTACTGATTTCACCCAGCCCTTC ATTGAATCTGGCTTGGTTATCTTGGCTCCAGTTAAAAAACATATTGTTAATTCCTGGGCA TTCTTGCAGCCATTCACTCTTCAGATGTGGTGTGTTACTGGATTATTCTTTCTTGTTGTG GGTGCAGTTGTTTGGGTTCTTGAACATCGAATAAATGACGAATTCCGTGGCTCACCGCGA GAACAAATAATTACTATTTTCTGGTTCAGCTTTTCAACCTTGTTTTTTGCACACAGAGAA AATACCATGAGTACCTTAGGACGTGGTGTCTTGATCATATGGCTATTTGTTGTTTTAATC ATTCAATCCAGCTATACTGCAAGTCTTACTTCCATCCTGACTGTTCAACAACTCGATACT TCTATAAGAGGAATTGATGACCTGAAAAATAGTGATGGTCCTATTGGTTTCCAAGTTGGT TCTTTTGCAGAAGAATACATGGTCAGGGAGCTGAACATCTCACGGTCGAGGCTGAGAGCT CTTGGTTCTCCAGAAGAATACGCTGAAGCGCTTAAGCATGGCCCTAAGAGAGGAGGTGTC ATGGCCATTGTAGATGAGCGCCCCTACGTTGAACTGTTTTTGTCAACTTATTGCAAGATT GCAGTTGCTGGTTCGGATTTCACCAGCAGAGGATGGGGCTTTGCATTTCCAAGAGACTCC CCTTTGCAAATTGACCTATCGACTGCGATCCTGTCACTGTCGGAGAACGGGGAACTGCAG AGGATCCATGACAAATGGCTCAAGACTAGCGAGTGCTCAGCCGACAACACCGAGTTTGTC GACTCGGATCAGCTCCGCCTTGAGAGCTTCTGGGGCCTGTTCCTCATTTGTGGTATCGCA TGTGTCATCGCGCTGCTCATCTACTTTTTCACCACCGTACGCAAATTCCTCAGGCATGAA CCTCCAGAAGATCCAACACCTCGTCCAGGCGGATCAACAACTCTTCCAGACGAACGAACA CCCCCAAAGAACGGACAAGAGAAATGCAACTGCAGAAATTTCATCTCATTTCTTGATCAC AAGGAGCCACCAAAGAAGAAGCGGTCCTTGAGTTTGACGCCGACAACGCCATTGAGCAAC TTTACTGCCCTTGAAATAGAAGGACCTGTGAGGACAGTCAGGAATGGTAGTGTCGTTGAC ATATAGAACTAGTGTGTGTAAAAAGCTGAGATGTTATATATTTTGGATCTGAGATATGCC ATCTTTCGGTCAATCTCCTCAATTTTAGTTGAGAGAAAATATAATCAGAGGCTGCATAAG ATGCTATCTGTAGATTTCAAGCAAATCCGGTGATGGGAAAAATTCATTTGAGGCCAGTTT GGCAACTGAAAAACTGTATAGAAAGTTATTCTTGTCCTTGATGGTATTTTGAATGGAGGA AATATATACGTCTGTTTGATT