Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0117400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:906668:911368:1 gene:Os02g0117400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPP1 description:Peptidase A22B, signal peptide peptidase domain containing protein. (Os02t0117400-01)
Sequence

ATGAAAACTCACGAGAGAGCTGCTAATTTGGCCCTTGCAGGTTTGAGCTTGGCACCCCTT
GTGGTTAAAGTAGAGCCAAATGTGAACGTCATATTGACAGCATGTCTTGCTGTCTATGTG
GGCTGTTACCGTTCTGTCAAGCCGACTCCACCCTCTGAGACAATGTCCAAGGAGCATGCT
ATGCGGTTTCCTTTGGTGGGAAGTGCTATGCTTCTCTCTCTGTTCCTTCTATTCAAGTTT
CTCTCGAAAGACTTGGTCAATGCTGTTCTCACTGCCTACTTTTTCATCCTTGGCATTGCC
GCTCTCTGTGCAACATTGCTGCCTTCCATAAAACGATTCCTTCCAAAAGAATGGAATGAT
AATGCCATCGTTTGGTGTGCTCCATTTTTCCACTCGCTCTCAGTGGAGTTTACCAAGTCT
CAAGTTGTTGCATCAATCCCAGGATTTTTCTTTTGCATATGGTATGCTGCGAAGAAGCAT
TGGCTAGCAAACAATGTTTTGGGGATTTCTTTCTGCATTCAGGGAATTGAGATGCTATCA
CTTGGATCATTCAAAACTGGTGCTATTCTCTTGGCTGGCCTCTTTTTCTATGATATTTTC
TGGGTTTTCTTCACTCCTGTTATGGTCAGTGTTGCAAAATCATTTGATGCACCGATAAAG
CTTCTATTTCCAACAGGAGATGCTGCACGCCCATTCTCTATGCTTGGGCTTGGTGACATT
GTGATACCTGGTATATTTGTTGCGCTAGCACTGCGGTTTGATGTCTCAAGAGGAATTAAG
AACCGCTACTTCAATAGTGCATTTTTGGGTTATACGGTGGGTTTGACCGTGACGATAATT
GTGATGAACTGGTTTCAAGCCGCACAGCCTGCCCTCTTGTACATTGTTCCTGGTGTGATT
GGTTTTGTTGCTGTTCACTGTTTATGGAATGGAGAAGTCAAGCCACTCCTGGAGTACAAC
GAGTCAAAGGCTGAAGAGGAAGATGCTGTTGAAGAAGATACTGATAGCAAACAGAACAAA
AAGGAGGAGTAG

Peptide Sequence

PEP ID

Os02t0117400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:906668:911368:1 gene:Os02g0117400 transcript:Os02t0117400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPP1 description:Peptidase A22B, signal peptide peptidase domain containing protein. (Os02t0117400-01)
Sequence

MKTHERAANLALAGLSLAPLVVKVEPNVNVILTACLAVYVGCYRSVKPTPPSETMSKEHA
MRFPLVGSAMLLSLFLLFKFLSKDLVNAVLTAYFFILGIAALCATLLPSIKRFLPKEWND
NAIVWCAPFFHSLSVEFTKSQVVASIPGFFFCIWYAAKKHWLANNVLGISFCIQGIEMLS
LGSFKTGAILLAGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTGDAARPFSMLGLGDI
VIPGIFVALALRFDVSRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQAAQPALLYIVPGVI
GFVAVHCLWNGEVKPLLEYNESKAEEEDAVEEDTDSKQNKKEE

Transcript Sequence

Transcript ID

Os02t0117400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:906668:911368:1 gene:Os02g0117400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPP1 description:Peptidase A22B, signal peptide peptidase domain containing protein. (Os02t0117400-01)
Sequence

AGTATAGTGAGTCTCGTCGCAGTGAGAGAGAGAGAGGAGTCGAGTAGATAGATAGATAGA
TCGGCGTGGGAGAAGACGACATCGCCGGCGACGAGACCAGATCGATCGCCGAGGTATCGC
CTCCCTCCCCGACCGAGCAGGGTCGCCGCCGTTCGTTCCTCTTGCTGCTTCCGCCGCATC
CATCCTGCGGGGACTAAACCTTGAAGCATCTGGGCTGTTGTTTCACCATTGTAGTGGATT
CCACTTCGGAACTGAACTTTTCTAGTTGTTTCCGTGACAATGAAAACTCACGAGAGAGCT
GCTAATTTGGCCCTTGCAGGTTTGAGCTTGGCACCCCTTGTGGTTAAAGTAGAGCCAAAT
GTGAACGTCATATTGACAGCATGTCTTGCTGTCTATGTGGGCTGTTACCGTTCTGTCAAG
CCGACTCCACCCTCTGAGACAATGTCCAAGGAGCATGCTATGCGGTTTCCTTTGGTGGGA
AGTGCTATGCTTCTCTCTCTGTTCCTTCTATTCAAGTTTCTCTCGAAAGACTTGGTCAAT
GCTGTTCTCACTGCCTACTTTTTCATCCTTGGCATTGCCGCTCTCTGTGCAACATTGCTG
CCTTCCATAAAACGATTCCTTCCAAAAGAATGGAATGATAATGCCATCGTTTGGTGTGCT
CCATTTTTCCACTCGCTCTCAGTGGAGTTTACCAAGTCTCAAGTTGTTGCATCAATCCCA
GGATTTTTCTTTTGCATATGGTATGCTGCGAAGAAGCATTGGCTAGCAAACAATGTTTTG
GGGATTTCTTTCTGCATTCAGGGAATTGAGATGCTATCACTTGGATCATTCAAAACTGGT
GCTATTCTCTTGGCTGGCCTCTTTTTCTATGATATTTTCTGGGTTTTCTTCACTCCTGTT
ATGGTCAGTGTTGCAAAATCATTTGATGCACCGATAAAGCTTCTATTTCCAACAGGAGAT
GCTGCACGCCCATTCTCTATGCTTGGGCTTGGTGACATTGTGATACCTGGTATATTTGTT
GCGCTAGCACTGCGGTTTGATGTCTCAAGAGGAATTAAGAACCGCTACTTCAATAGTGCA
TTTTTGGGTTATACGGTGGGTTTGACCGTGACGATAATTGTGATGAACTGGTTTCAAGCC
GCACAGCCTGCCCTCTTGTACATTGTTCCTGGTGTGATTGGTTTTGTTGCTGTTCACTGT
TTATGGAATGGAGAAGTCAAGCCACTCCTGGAGTACAACGAGTCAAAGGCTGAAGAGGAA
GATGCTGTTGAAGAAGATACTGATAGCAAACAGAACAAAAAGGAGGAGTAGCACTCTAAC
AGCAGGGCAAGAAAAGGCAGAAATTTCATGTAAGGTCGTCGGCAGCTAAGTAGGCTGGAT
GACCTCTCGGATACCAGCTCACTTAAGAACTTAGAAATGATTCGCATGATAGAAACCCTT
TTTTGATTTAAGAATTGTTTGGTCTGGTGATTAGAAGAGAAGAGAGTAGATTCTTAAGAG
GCCTGCCAATATGGTCCAGTGGCTTGACTTTACCCGGTACCCCTTTTGCTTTAGTACTGA
CTTATAATGGTGGTACAAAGGATTTACCTGAATTTTTGGTCTGGCAAATAGCGGTTTGTG
AT