Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0117100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:896074:900370:1 gene:Os02g0117100 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site domain containing protein. (Os02t0117100-01)
Sequence	ATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCCGCTCCCGCTCCCGCG GCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTC CCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAG GCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGAC GCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTC CCGCCTCTGCCGAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCC AACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGACTAGATCT TGTATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCT CTAGACTCGATTGAGACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTT AATACCTTCTTCAGATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAA GATCGATGGAAATCTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGT GACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAGCCCTTCTC TTTAATCTTGAACTAGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAA GATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGAC TACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGT CAATACCCAGGGCCCTGGCAGGTCATGCTTAAGCAAGCCGATGGTTCTTATGCATGTGTT GCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTT GGTTTGCAAGAAGAACAAGGAAGCTCACTAGAATTTCTCAGAAGAGGATACAAGAATGCT ACTTGGTGGGAAGAGAATGTTGATCAGGAGAAATCGTCAGCATGGCGAACTTGA

Peptide Sequence

PEP ID	Os02t0117100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:896074:900370:1 gene:Os02g0117100 transcript:Os02t0117100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site domain containing protein. (Os02t0117100-01)
Sequence	MATPAPLSGLRPRAPAPAPAARSRLCGQSPPVVAPRLGAFPRRRGGAARCSPRAEAGDVE ALRAGVSVYKPRSYDVLVSDAARSLACAMDEGKTRLEIEFPPLPSNISSYKGSSDEFIDA NIQLALAVARKLKELKGTRSCIVFPDLPEKRRASQLFGTALDSIETATISSLDEVSTGPV NTFFRSMRDTLDFDFADDVEDRWKSDEPPSLYIFINCSTRDLSTIEKYVEQFASSVPALL FNLELDTLRSDLGLLGFPPKDLHYRFLSQFTPVFYIRQRDYSKTIAVTPYIVNYSGAVFR QYPGPWQVMLKQADGSYACVAESAARFTLGQAKEELLRVLGLQEEQGSSLEFLRRGYKNA TWWEENVDQEKSSAWRT

Transcript Sequence

Transcript ID	Os02t0117100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:896074:900370:1 gene:Os02g0117100 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site domain containing protein. (Os02t0117100-01)
Sequence	GCTCGTCACTTCGTCTCCTCCTCTCCACCACTCGTCGTCGTCGGCGGCGTGGCCATGGCG ACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCCGCTCCCGCTCCCGCGGCGCGC AGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGG CGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTT AGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCC CGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCT CTGCCGAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATC CAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGACTAGATCTTGTATT GTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCTCTAGAC TCGATTGAGACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTTAATACC TTCTTCAGATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAAGATCGA TGGAAATCTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTT TCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAGCCCTTCTCTTTAAT CTTGAACTAGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTG CATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCT AAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATAC CCAGGGCCCTGGCAGGTCATGCTTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAG AGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTG CAAGAAGAACAAGGAAGCTCACTAGAATTTCTCAGAAGAGGATACAAGAATGCTACTTGG TGGGAAGAGAATGTTGATCAGGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCT GCTGCTGCCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGACAGGAACAGAAGAA AAAAATGGTTGTCTGAAATTGCAGAGCCCAGGCGACAAGGATGCAAATTGCCTGTGCTGC AATTGTACATTTTGTGATTGTAACATGTTACTGTGTGAGTAACAGGCATTAGAGTTTTGA GAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCA TGAAGCAACTTCACATTTTAAATGGAAATTCGTGTTCATCC