Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0116600-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:876032:878452:-1 gene:Os02g0116600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 059 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0116600-01);Helix-loop-helix DNA-binding domain containing protein. (Os02t0116600-02)
Sequence	ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGC GACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATT GATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGA GATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGAT AGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAG TTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAG GCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTG GAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAA CAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCA GCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAAC AAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCA ACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA

Peptide Sequence

PEP ID	Os02t0116600-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:876032:878452:-1 gene:Os02g0116600 transcript:Os02t0116600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 059 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0116600-01);Helix-loop-helix DNA-binding domain containing protein. (Os02t0116600-02)
Sequence	MDGGGDPVDEFLIGGGGEDGDLGVFCDGVPTLPCDGGLGIDDVSGDTCCLDQSVLGKRGR DESSSSGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGE AEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVPHLPHP AAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPNA

Transcript Sequence

Transcript ID	Os02t0116600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:876032:878452:-1 gene:Os02g0116600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 059 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0116600-01);Helix-loop-helix DNA-binding domain containing protein. (Os02t0116600-02)
Sequence	ATCCCCAAATCCCCAATTCTTCCCCGACCTCTCGCTCGCGGAGGAGGAGCGAGAATCCCC GAACCCTAGGCCCGATCTCCCGCACCCGCCGCGGGCGATGGACGGAGGCGGAGACCCCGT TGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGG TGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTG TTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCC AAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGA GTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAG TGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAA TGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGA GAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGT TGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATT CCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGC ATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGA TCCAAAGCTTTGGCCACCAAATGCTTAATTAGGTGCAGACTAGCTATGCTGCTATTCATC CATTGGCAGATCAAAATGTGTTCGGTCTTCCTGGAGAGTAAAATAGTCCGCGATGCTGTC CATTACGTGGTAAACTGTTCTTTTATTGGAGTTCTGTTTTTAACTCGTCCTATTGAGGGG CGATGCCTGTAATTAATCTGGATCGTAACCCTCTTGCCTGGTGAATGCTCCACAAACTCT CATGTCCCTCGCATGAGTTTGTTCAAGTGTGGAAGTTGTGACTGTGCTATTATTTTAGCA TTGGCTTGGCAGT