Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0116300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:862273:864880:1 gene:Os02g0116300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 7 description:Similar to Yellow stripe-like transporter 17. (Os02t0116300-01)
Sequence	TTTCCCTACAATACAATGGAGCCTGTCAATGATTTCCAGGAAGGCATTTCAACAGAGCAT GCCTTTGAGGCAGAGCCTGTGCCATCATTGTCGGAAACAATAACGCCACGATCAATGGTG GTGAGCTTCATCCTTAGTGTAACTCTCAGCATCGTCGCCATGAAGGTCACCTTGAGCTCT GGCTTCATTCCGTCGTTCAGCATCCCAGCCGGCCTCCTCGGTTTTTGTGTATCCCGTGCG TCGATCCGCATTCTTGACTACTTCGCAGTGGCACAACTACCATTCACACGCCAAGAGAAC ACCATCATCCAGACCTGTGTCGTCGCATGCACCTCGATCACATTCACCGGTGGCTTTGGG ACATATATTCTTGCAATGGGAAAGAAAGCAGCTGTAGGGGATGTCAATGCCCAAAATAAC GTTGAGGAGCCAAGCTTTGCCAGGATGATCACCTTCCTCTTCCTTATCAGCTTTGCTGGC ATGTTCATCATCATGCCCTTCAGGAAGGTCATGATCATTAGGCACCGGTTGACATTCCCC AGCGGCACAGCAACGGCGCACCTCATCAATAGCTTCCATACACCTCAAGGTGTCAAGCAA GCAAGGAAGCAAGTGACATTATTGTTTAAATCGTTTGGAGGAACCATCGCATGGTCGCTC TTCCAGTGGTTCTTCGCCTCTGGGCCGGGCTGTGGCTTCAAATTCTTCCCCACATTTGGC CTCGAGGCATATAAACACGGATTCTTCTTCGATTTCACCATGGCCAATGTCGGCATTGGC ATGATGTGCCCGTACATGATCGTGTTCTCCGTTTTCATTGGCACCATCATCTCGTGCGGT GTAATTTGGCCGTACATCGAGTCAAAGGAGGGCATCTGGTACCCAAGCAACCTTGGGCCC AACAGCCTTAACGGCATCAGAGGTTACAAGGTGTTCATCGGCTTGTCCATGATAATGGCT GACTGCCTCTTCGTCTTCCTCTGCATCATGGTCCGGACAACATGTGCCATGATCAAGCGG CGTCGGCAGGCAATGCAAGGTGGTGGCGGTAATGCGCAGCCATTCCAGGGTATCGACATC GCCGATCAGCCGGTGAAGAGCTTCGATGATCGCCGCAGGGCGCAGGTGTTCCTCCGGGAC GAGATACCGGACTCGGTCACCATTGGCTGCTATGTCCTCCTGTCGATCATCTCCATCGCC GCCATCCCTCACCTCTACCCACAGATGAGGTACAGCCATGTTGCGCTCATCTACCTCGCC GCGCCCGTCTTCGCCTTCTGCAACGCCTACGGCTTCGGCGTCACCGACATGAACCTGGCT AGCACCTATTGCAAGATCGCCATGTTCGCGTTCGGCTCGTGGGTCGGCATCAAGAGCGGC GGCGTGGTCGCCGCCCTGGTCGCCGGCGGGATCACCATGTCGATCCTGGGCAACGCGGCC GACGTCGCGCAGGACCTCAAGACGGGCTACCTGACGCTGACGTCGCCGCGCGCCGTGTTC ATCAGCGAGGCGATCGGCACGGCGCTGGGATGCGTCGTCAACCCCACCGTGTTCTGGGTG TTCTACAGGGTGTACAAGATGGGCAGCGGCGACATGGGCGACATGCCCTACGCCAAGCTC TACCGCGGCTTCGCCATGCTCAGCGTCGGCGACGGCGAGCAAGGCCTGCCCAGGCACAGC ATGCTCCTCTTCAAGGTCTTCTTCGTGCTCGCCCTGGCGCTCAGCGTGTTCCGGGAGGTG GCGAGCCGGAAGGAGTGGCGCATCCGGCGCTACATCCCGAGCACCATCGGCATGGCCATC ACCTTCTTCATGCCGCCGCGCGTGCCCGTCGGCATGTGCATCGGCAGCCTGGTGGCGTAC CTGTGGGAGAAGATGGACGCCGGCCGCGGGCGGATGCTCTCGCCGGCGCTGGCGTCGGGG CTCATCTGCGGCGACGGCGTCGGCTCGATCTTGCTGTCCATGCTGACACTCATGGGTGCC AGGGCGCCCATCTGCATCAAGTTCTTGTCTCGAGGTGACAATGTCAAGTTGGACGCCTTC TTGGCAACACTCCATGACATGAGATAG

Peptide Sequence

PEP ID	Os02t0116300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:862273:864880:1 gene:Os02g0116300 transcript:Os02t0116300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 7 description:Similar to Yellow stripe-like transporter 17. (Os02t0116300-01)
Sequence	FPYNTMEPVNDFQEGISTEHAFEAEPVPSLSETITPRSMVVSFILSVTLSIVAMKVTLSS GFIPSFSIPAGLLGFCVSRASIRILDYFAVAQLPFTRQENTIIQTCVVACTSITFTGGFG TYILAMGKKAAVGDVNAQNNVEEPSFARMITFLFLISFAGMFIIMPFRKVMIIRHRLTFP SGTATAHLINSFHTPQGVKQARKQVTLLFKSFGGTIAWSLFQWFFASGPGCGFKFFPTFG LEAYKHGFFFDFTMANVGIGMMCPYMIVFSVFIGTIISCGVIWPYIESKEGIWYPSNLGP NSLNGIRGYKVFIGLSMIMADCLFVFLCIMVRTTCAMIKRRRQAMQGGGGNAQPFQGIDI ADQPVKSFDDRRRAQVFLRDEIPDSVTIGCYVLLSIISIAAIPHLYPQMRYSHVALIYLA APVFAFCNAYGFGVTDMNLASTYCKIAMFAFGSWVGIKSGGVVAALVAGGITMSILGNAA DVAQDLKTGYLTLTSPRAVFISEAIGTALGCVVNPTVFWVFYRVYKMGSGDMGDMPYAKL YRGFAMLSVGDGEQGLPRHSMLLFKVFFVLALALSVFREVASRKEWRIRRYIPSTIGMAI TFFMPPRVPVGMCIGSLVAYLWEKMDAGRGRMLSPALASGLICGDGVGSILLSMLTLMGA RAPICIKFLSRGDNVKLDAFLATLHDMR

Transcript Sequence

Transcript ID	Os02t0116300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:862273:864880:1 gene:Os02g0116300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 7 description:Similar to Yellow stripe-like transporter 17. (Os02t0116300-01)
Sequence	TTGCTGCCAGCATTTTGATTCTGTGTGTGTGTCTTGGTTGCAAAAACCAAGACATACACA CAGAATCAAATAATAACAAAGGTTTCCTAGCCTCAAAGGATACATATATATAGTTTCCCT ACAATACAATGGAGCCTGTCAATGATTTCCAGGAAGGCATTTCAACAGAGCATGCCTTTG AGGCAGAGCCTGTGCCATCATTGTCGGAAACAATAACGCCACGATCAATGGTGGTGAGCT TCATCCTTAGTGTAACTCTCAGCATCGTCGCCATGAAGGTCACCTTGAGCTCTGGCTTCA TTCCGTCGTTCAGCATCCCAGCCGGCCTCCTCGGTTTTTGTGTATCCCGTGCGTCGATCC GCATTCTTGACTACTTCGCAGTGGCACAACTACCATTCACACGCCAAGAGAACACCATCA TCCAGACCTGTGTCGTCGCATGCACCTCGATCACATTCACCGGTGGCTTTGGGACATATA TTCTTGCAATGGGAAAGAAAGCAGCTGTAGGGGATGTCAATGCCCAAAATAACGTTGAGG AGCCAAGCTTTGCCAGGATGATCACCTTCCTCTTCCTTATCAGCTTTGCTGGCATGTTCA TCATCATGCCCTTCAGGAAGGTCATGATCATTAGGCACCGGTTGACATTCCCCAGCGGCA CAGCAACGGCGCACCTCATCAATAGCTTCCATACACCTCAAGGTGTCAAGCAAGCAAGGA AGCAAGTGACATTATTGTTTAAATCGTTTGGAGGAACCATCGCATGGTCGCTCTTCCAGT GGTTCTTCGCCTCTGGGCCGGGCTGTGGCTTCAAATTCTTCCCCACATTTGGCCTCGAGG CATATAAACACGGATTCTTCTTCGATTTCACCATGGCCAATGTCGGCATTGGCATGATGT GCCCGTACATGATCGTGTTCTCCGTTTTCATTGGCACCATCATCTCGTGCGGTGTAATTT GGCCGTACATCGAGTCAAAGGAGGGCATCTGGTACCCAAGCAACCTTGGGCCCAACAGCC TTAACGGCATCAGAGGTTACAAGGTGTTCATCGGCTTGTCCATGATAATGGCTGACTGCC TCTTCGTCTTCCTCTGCATCATGGTCCGGACAACATGTGCCATGATCAAGCGGCGTCGGC AGGCAATGCAAGGTGGTGGCGGTAATGCGCAGCCATTCCAGGGTATCGACATCGCCGATC AGCCGGTGAAGAGCTTCGATGATCGCCGCAGGGCGCAGGTGTTCCTCCGGGACGAGATAC CGGACTCGGTCACCATTGGCTGCTATGTCCTCCTGTCGATCATCTCCATCGCCGCCATCC CTCACCTCTACCCACAGATGAGGTACAGCCATGTTGCGCTCATCTACCTCGCCGCGCCCG TCTTCGCCTTCTGCAACGCCTACGGCTTCGGCGTCACCGACATGAACCTGGCTAGCACCT ATTGCAAGATCGCCATGTTCGCGTTCGGCTCGTGGGTCGGCATCAAGAGCGGCGGCGTGG TCGCCGCCCTGGTCGCCGGCGGGATCACCATGTCGATCCTGGGCAACGCGGCCGACGTCG CGCAGGACCTCAAGACGGGCTACCTGACGCTGACGTCGCCGCGCGCCGTGTTCATCAGCG AGGCGATCGGCACGGCGCTGGGATGCGTCGTCAACCCCACCGTGTTCTGGGTGTTCTACA GGGTGTACAAGATGGGCAGCGGCGACATGGGCGACATGCCCTACGCCAAGCTCTACCGCG GCTTCGCCATGCTCAGCGTCGGCGACGGCGAGCAAGGCCTGCCCAGGCACAGCATGCTCC TCTTCAAGGTCTTCTTCGTGCTCGCCCTGGCGCTCAGCGTGTTCCGGGAGGTGGCGAGCC GGAAGGAGTGGCGCATCCGGCGCTACATCCCGAGCACCATCGGCATGGCCATCACCTTCT TCATGCCGCCGCGCGTGCCCGTCGGCATGTGCATCGGCAGCCTGGTGGCGTACCTGTGGG AGAAGATGGACGCCGGCCGCGGGCGGATGCTCTCGCCGGCGCTGGCGTCGGGGCTCATCT GCGGCGACGGCGTCGGCTCGATCTTGCTGTCCATGCTGACACTCATGGGTGCCAGGGCGC CCATCTGCATCAAGTTCTTGTCTCGAGGTGACAATGTCAAGTTGGACGCCTTCTTGGCAA CACTCCATGACATGAGATAGCTACTAGCTAGCTATCCATGTAGGGAAACTAGATCATTTT CTCAGGTGTCAAAACTTTTGTACATATGTATCCACGTCATAGGGGCTTGAGTTAGGAGTC GTGGCAAACTGTATAATCAAGTTTCAGTTCAGTCTATAAACACAGTTTGATCTCCTCTA