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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0114100-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:763409:765119:-1 gene:Os02g0114100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF6, transmembrane domain containing protein. (Os02t0114100-00)
Sequence

ATGGGGGACGCGGCGGCGGGCGGGAGGAAGGCGGCGGCGTCCGGCGGCGGCGCGCGGCTG
CACGTGGCGATGCTGGCGCTGCAGCTCGGGTACGCCGGGTTCCACGTGGTGTCGCGGCTG
GCGCTGGACATGGGCGTCAGCAAGCTCGTCTTCCCCGTCTACCGCAACCTCATCGCCCTC
TTCCTCCTCGCCCCCTTCGCCTACTTCCTCGAGAAGAAGGAGAGGCCGGCCATGACGGCG
AGCTTGGCGGTGCAGTTCTTCTTCCTGGCGCTGTGCGGGATCACCGCCAACCAGGGCTTC
TACCTGCTGGGGCTCGAGAACACCTCGCCGACGTTCGCCTCCGCCATCCAGAACTCCGTC
CCGGCCATCACCTTCGCCATGGCCGCCGCGCTCCGCATCGAGCGCGTCCGCCTCTCCTCC
CGCGACGGCCTCGCCAAGGTCGCCGGCACGCTGCTCTGCGTCGCCGGCGCCTCCGTCATC
ACGCTCTTCAAGGGCCCCGCCATCTTCAACACCCACCACAACCACCAGCCGCAACCGCAA
CAGCTCGCCGTCGCCGTCGCCGCCGGCAACAAGAGCTGGACGCTGGGGTGCGTGTTCCTG
CTGGGGCACTGCGTGTCGTGGTCGGGGTGGCTGGTGCTGCAGGCGCCGGTGCTGAAGCGC
TACCCGGCGAGGCTGTCGGTGACGTCATACACCTGCTTCTTCGGCCTCATCCAGTTCCTC
GCCATCGCCGCGTTCCTGGAGCGCGACGCCGCCGCCTGGGCCGTCCGCTCCGGCTCCGAG
CTCTTCACCATCCTCTACGCCGGATTCGTCGCCTCGGGCGTCGCCTTCGCCGTGCAGACG
TGGTGCATCCACCGCGGCGGCCCCGTGTTCGTGGCCGTCTACCAGCCCGTGCAAACCCTC
CTCGTCGCCGTCATGGCTTCCCTCCTCCTCGGCGAGCAATTCCACCTCGGAGGGATCATT
GGGGCGGTGCTGATAGTGGCAGGGCTGTACCTGGTGCTGTGGGGGAAGAGCCAGGAGAGA
GCCATTGCTGCTGCAAAAGAAGCTTCTGCTGCTGCCGCCATTGCTGACCACCAGCAGCAA
CCAGCTTCTGCTGCTGCTGCTGATTCTTGCCTGAAGCAACCACTCCTGCCGGCGTCGACG
GTGGCCTCAGAGAATGTGTGA

Peptide Sequence

PEP ID

Os02t0114100-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:763409:765119:-1 gene:Os02g0114100 transcript:Os02t0114100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF6, transmembrane domain containing protein. (Os02t0114100-00)
Sequence

MGDAAAGGRKAAASGGGARLHVAMLALQLGYAGFHVVSRLALDMGVSKLVFPVYRNLIAL
FLLAPFAYFLEKKERPAMTASLAVQFFFLALCGITANQGFYLLGLENTSPTFASAIQNSV
PAITFAMAAALRIERVRLSSRDGLAKVAGTLLCVAGASVITLFKGPAIFNTHHNHQPQPQ
QLAVAVAAGNKSWTLGCVFLLGHCVSWSGWLVLQAPVLKRYPARLSVTSYTCFFGLIQFL
AIAAFLERDAAAWAVRSGSELFTILYAGFVASGVAFAVQTWCIHRGGPVFVAVYQPVQTL
LVAVMASLLLGEQFHLGGIIGAVLIVAGLYLVLWGKSQERAIAAAKEASAAAAIADHQQQ
PASAAAADSCLKQPLLPASTVASENV

Transcript Sequence

Transcript ID

Os02t0114100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:763409:765119:-1 gene:Os02g0114100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF6, transmembrane domain containing protein. (Os02t0114100-00)
Sequence

AGCAGAACTCACTCACAGTCTCAGTCTCAGTCTCACTGCTTCAGCTCAGCTCTCCTCTCG
TAGCTCGACGAGCTAGCTAGCCCAGCTACGACAATCATGGGGGACGCGGCGGCGGGCGGG
AGGAAGGCGGCGGCGTCCGGCGGCGGCGCGCGGCTGCACGTGGCGATGCTGGCGCTGCAG
CTCGGGTACGCCGGGTTCCACGTGGTGTCGCGGCTGGCGCTGGACATGGGCGTCAGCAAG
CTCGTCTTCCCCGTCTACCGCAACCTCATCGCCCTCTTCCTCCTCGCCCCCTTCGCCTAC
TTCCTCGAGAAGAAGGAGAGGCCGGCCATGACGGCGAGCTTGGCGGTGCAGTTCTTCTTC
CTGGCGCTGTGCGGGATCACCGCCAACCAGGGCTTCTACCTGCTGGGGCTCGAGAACACC
TCGCCGACGTTCGCCTCCGCCATCCAGAACTCCGTCCCGGCCATCACCTTCGCCATGGCC
GCCGCGCTCCGCATCGAGCGCGTCCGCCTCTCCTCCCGCGACGGCCTCGCCAAGGTCGCC
GGCACGCTGCTCTGCGTCGCCGGCGCCTCCGTCATCACGCTCTTCAAGGGCCCCGCCATC
TTCAACACCCACCACAACCACCAGCCGCAACCGCAACAGCTCGCCGTCGCCGTCGCCGCC
GGCAACAAGAGCTGGACGCTGGGGTGCGTGTTCCTGCTGGGGCACTGCGTGTCGTGGTCG
GGGTGGCTGGTGCTGCAGGCGCCGGTGCTGAAGCGCTACCCGGCGAGGCTGTCGGTGACG
TCATACACCTGCTTCTTCGGCCTCATCCAGTTCCTCGCCATCGCCGCGTTCCTGGAGCGC
GACGCCGCCGCCTGGGCCGTCCGCTCCGGCTCCGAGCTCTTCACCATCCTCTACGCCGGA
TTCGTCGCCTCGGGCGTCGCCTTCGCCGTGCAGACGTGGTGCATCCACCGCGGCGGCCCC
GTGTTCGTGGCCGTCTACCAGCCCGTGCAAACCCTCCTCGTCGCCGTCATGGCTTCCCTC
CTCCTCGGCGAGCAATTCCACCTCGGAGGGATCATTGGGGCGGTGCTGATAGTGGCAGGG
CTGTACCTGGTGCTGTGGGGGAAGAGCCAGGAGAGAGCCATTGCTGCTGCAAAAGAAGCT
TCTGCTGCTGCCGCCATTGCTGACCACCAGCAGCAACCAGCTTCTGCTGCTGCTGCTGAT
TCTTGCCTGAAGCAACCACTCCTGCCGGCGTCGACGGTGGCCTCAGAGAATGTGTGA