Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0113800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:743366:745313:1 gene:Os02g0113800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os02t0113800-01)
Sequence

ATGGATGATGGTGATGAGCCCGTCCCCTACGTCATGGATGAGGGTGTGCTACTACCCTTG
CTGTTTCCGCCGCCGCTGCCGGCCGACGACGACGCCACCGCCGGCGTGAGCCCAAGCTGG
GTGTACCTCGAAGACAGAGCTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCC
TTCTCCACCACCACCACCGGCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCG
CGCCTCTCCTACCTCTGCGTCCACTGCCCCCGCCCCGGCGACGGCGAGGGCGCCTACCGG
TTCACTGTCGATCCCCGAGTCCTCGGCACGCACACCGATGTAGCCCTCCTCCGCGTCCCG
CACCCCAACGACGGGCTCCACCGCGGAATCAAATCCTACGACTACTTCGTCTACACGGCC
CGCCCAGGCCCGGGCGCCTCCTTGCTCCGGCTGCTGCCGAACCCGCGGGTCTCCCCCTTC
CGCAACGAGGAGGTCGCCATCGTCCGCTGCTCCGGCGGCGCCCGCTACGTCATCGCCTGC
CTCATGCCAACCATCAGGCGCCCCATGGAGTTCAAGGTTATGCGCTTCGACTCCGACGTC
GGCCGCTGGAAATCCACAGCTGTGTCCATCAGTGAGCCGGTCGAGAGGGACAGGGTGCTC
CCCATCCCTGACACGGCCAGCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTC
GGCGGCACCATCGGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGACGTGCTT
GACCAACACCTGGTGCTCCGCGACGTGCCACTGCCCAAGCCAGCGAGAAGCAACCGCAAA
TCCTTCTGCAGAGGGCCGCCGCATCATTACCGGGACATCACCGTTGTCGTGCAGGACTCT
GTTCCCACCTGCATCAAGTACGTTGAGATGGTGACCCGCCCCGGTGATCGGCCACCTCCT
CGACAACGACAGCCGCCGCAACATTCTGATGACTCTGACTCTGATGAGGAAGAGGACGTT
GCTTACTACTGGAAGGCTAACATATGGAGCATGCCGATACCAGTTGGTTCATGGGAGGAT
TGGCAGATGGAGTGCACGGTGGATGTCACTGACATCGCCGTCGACAATGTCAGGTTCAGT
GAGCTGCTGCCAAAGATTGGCAATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGGT
TTCCCCACATTGGGTATGGATGGGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTTG
GATGATAAGGGATGGGTTATCTCTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGCT
GAGCTTGATGAGAGGAAGAATTTCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTCC
AAATATCTTATCAAGGCTACAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGT
AGAGTCTCAAAAAAGAAGAAGTAG

Peptide Sequence

PEP ID

Os02t0113800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:743366:745313:1 gene:Os02g0113800 transcript:Os02t0113800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os02t0113800-01)
Sequence

MDDGDEPVPYVMDEGVLLPLLFPPPLPADDDATAGVSPSWVYLEDRAYVSPDAVSNSTTA
FSTTTTGVSIHVSFCLARPPRLSYLCVHCPRPGDGEGAYRFTVDPRVLGTHTDVALLRVP
HPNDGLHRGIKSYDYFVYTARPGPGASLLRLLPNPRVSPFRNEEVAIVRCSGGARYVIAC
LMPTIRRPMEFKVMRFDSDVGRWKSTAVSISEPVERDRVLPIPDTASQMVFHCTTKVITL
GGTIGWVDLWRGILLCDDVLDQHLVLRDVPLPKPARSNRKSFCRGPPHHYRDITVVVQDS
VPTCIKYVEMVTRPGDRPPPRQRQPPQHSDDSDSDEEEDVAYYWKANIWSMPIPVGSWED
WQMECTVDVTDIAVDNVRFSELLPKIGNDPEETLRRLVTGFPTLGMDGDVISFLSKINRL
DDKGWVISVDLRSKTLQGVAELDERKNFLFKRYYNTSEISKYLIKATGEAGTLVKTGVNS
RVSKKKK

Transcript Sequence

Transcript ID

Os02t0113800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:743366:745313:1 gene:Os02g0113800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os02t0113800-01)
Sequence

TCTTCCTCGTCTTGGGGCACAACTCCGATTTAGGGTTAGCTCCTCCTCCTCCTCATCGCT
GATTAGGATTCGATTCGACCGGATCCCTCGCCGCCTTCGCCATGGATGATGGTGATGAGC
CCGTCCCCTACGTCATGGATGAGGGTGTGCTACTACCCTTGCTGTTTCCGCCGCCGCTGC
CGGCCGACGACGACGCCACCGCCGGCGTGAGCCCAAGCTGGGTGTACCTCGAAGACAGAG
CTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCCTTCTCCACCACCACCACCG
GCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCGCGCCTCTCCTACCTCTGCG
TCCACTGCCCCCGCCCCGGCGACGGCGAGGGCGCCTACCGGTTCACTGTCGATCCCCGAG
TCCTCGGCACGCACACCGATGTAGCCCTCCTCCGCGTCCCGCACCCCAACGACGGGCTCC
ACCGCGGAATCAAATCCTACGACTACTTCGTCTACACGGCCCGCCCAGGCCCGGGCGCCT
CCTTGCTCCGGCTGCTGCCGAACCCGCGGGTCTCCCCCTTCCGCAACGAGGAGGTCGCCA
TCGTCCGCTGCTCCGGCGGCGCCCGCTACGTCATCGCCTGCCTCATGCCAACCATCAGGC
GCCCCATGGAGTTCAAGGTTATGCGCTTCGACTCCGACGTCGGCCGCTGGAAATCCACAG
CTGTGTCCATCAGTGAGCCGGTCGAGAGGGACAGGGTGCTCCCCATCCCTGACACGGCCA
GCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTCGGCGGCACCATCGGCTGGG
TGGATCTCTGGAGAGGGATCCTGCTGTGTGACGACGTGCTTGACCAACACCTGGTGCTCC
GCGACGTGCCACTGCCCAAGCCAGCGAGAAGCAACCGCAAATCCTTCTGCAGAGGGCCGC
CGCATCATTACCGGGACATCACCGTTGTCGTGCAGGACTCTGTTCCCACCTGCATCAAGT
ACGTTGAGATGGTGACCCGCCCCGGTGATCGGCCACCTCCTCGACAACGACAGCCGCCGC
AACATTCTGATGACTCTGACTCTGATGAGGAAGAGGACGTTGCTTACTACTGGAAGGCTA
ACATATGGAGCATGCCGATACCAGTTGGTTCATGGGAGGATTGGCAGATGGAGTGCACGG
TGGATGTCACTGACATCGCCGTCGACAATGTCAGGTTCAGTGAGCTGCTGCCAAAGATTG
GCAATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGGTTTCCCCACATTGGGTATGG
ATGGGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTTGGATGATAAGGGATGGGTTA
TCTCTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGCTGAGCTTGATGAGAGGAAGA
ATTTCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTCCAAATATCTTATCAAGGCTA
CAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGTCTCAAAAAAGAAGA
AGTAGGAATTAATTAATGAATCACGTAGGCTACCTGGGTTGAAGAAATGAAACGAGCTGC
AGAGACTGGGCGATTCATGAGCTACTTTCTGTAATGAGCTATTATCAGAGTTGTTCTGTG
CAAGACATGCTACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTATCCCAAGTTAAACTG
CTATCTTCCCC