Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0111900-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:646112:649305:1 gene:Os02g0111900 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0111900-01)
Sequence	ATGGCGCAGCCGAGAGTCATCCGGGTGCGCGCCCACGACGGGCGCTCCACCACCGTCACG ATCGCCGCCTCCGCCACCGTCAGCGACCTCAGGACGGCGCTCCGTTCCTCCTTCGCTCCC GCGCTGGTTTCCCCCGACTTCCACCTCTTCCTCAAGGGCACCAAGCTCATCGCCGACGCC AAGGTCGGCAACCTCCCCGTCGGCCCCGGCGAGTCCATCTCTTTCATCCCGGTCAACGCC AAGTCAGCGCCGCCGCACCCTCCGTCGTCGAGCGCGCCGAATCCATGGAGGAAACGCAAG TTTTCTTGGCACGACGGCGGCGGCGAAGACATCTACGCCAAGAAGCCGACGAACCCAGCG CCGCCGAGGCCGCTCTCCTGCCATGGCACCCAACCTCTCGACCCTACCCAAATGGTGGAG CATCTCAGGCAAGGGCTCGGGAAGGCCGGACAGATCACCCATGTCGAGGAGATCCCGGGA AGGGAGGCGACGTTCGCCGAACTCCCCGGCCACCTCTCGTCCTCCATGAGGGACGCGCTG AGAAGCATCGGCGTCACCAAGCTGTACGCCCACCAGGCGCAGGCCGTGCAATCCGCCGTC TCCGGCGAGCACGTCGTGGTGTCCACCTCGACGTCGAGCGGCAAGTCGCTGTGCTACAAC ATCCCCGTCCTCGAGTCCATCTCCCAGAGCTCCGCGCCATGCGCGCTCTACATCTTCCCC ACCAAGGCTCTGGCCCAAGACCAGCTCAAGACACTGCTCGAGATGAAGCCGGCGTTCCGC TCAGACTTCGACGTCAGCATCTACGACGGCGACACCGCCATGAAAGACCGGACAAGGATC AGGAACACCGCGAGGCTGCTGATCACCAACCCTGACATGCTCCACATGTCGATCTTGCCA TGCCATGCTCAGTTCAAGAGGGTCCTCTTCAACCTCAAGTACATTGTCATCGACGAGGCG CATTCCTACAAGGGCGCATTTGGCTGCCACGCTGCGTTGATTCTGAGAAGATTAAAGCGC ATCTGTTCATATGTTTATGGAAGCAATCCAACATTCATATTCTGCACCGCGACATTGGCC AATCCGAGGGAGCATGTCATGGAGCTGGCAAATCTTGATCGAGTCGTGCTGGTTGATAAT GACACGAGTCCTTGCGGCTCAAAGAACTTCCTCCTGTGGAATCCGCCATTGCAATTGGCG AAAGCAGAAGACAGAAGACCAAACCCAGTACTAGAGGTTTCCTATCTGTTCGCCGAGATG GTTCAGCATGGGCTTCGTGCCATCGCCTTCTGCAAGACGAGGAAGATGTGTGAGCAGGTG CTAATGCAGACGCGTCAGATTCTTAAGGAGACAGCTGCAGAATTGGTGAATTCTATCTGT GTCTACCGTGGTGGCTATGTTGCGAGTGACAGGAGGAAGATCGAGGCTGATCTCTTCGGT GGAATTCTTCGCGGCGTCGCGGCTACCAATGCTCTTGAGCTGGGGATCGATGTCGGGCAC ATCGATGCGACGCTGCACCTGGGATTTCCTGGAAGCATGGCTAGCTTCTGGCAGCAGGCA GGGAGATCAGGGAGAAGAGCAAAGCAGTCCATAGCTGTTTATGTAGCCTTTGAGGGTGCT CTTGACCAGTACTTCATGAGATCACCACACAAGCTGTTTGGCAAGCCCATTGAGCACTGC CAGGTTGATTCACAAAACCGCAAGGTTCTTGAACAGCATCTCGCTTGCGCCGCTTCTGAA TATCCACTGCGTCAGGAACATGACGAGAGCTACTTTGGTTTTAGCATGAACAGTGTTTTG ATGACACTGAAAGATAAGGGCTGTCTCATGAACAATCCATCTGGAGGAGATTCAGGCGTG TGGAAGTATATTGGACCTGATAAAAAACCTTCTCATAGTGTAAGCATACGGGCAATTGAG CATCACAGGTACAAGGTGATCGACAGGAGAAGCAATCGAGTTCTTGAAGAGATTGAGGAA AGCAAGGCTTTCTTTCAGGTGTATGATGGTGCTGTCTACATGCACCAAGGTGTCAGCTAC TTGGTTGATAAGCTTGATCTGACATCAAGGATAGCTTACTGCAAGGTGTTTGATCTGAAC TACTACACCAAAGTTCAGGACTACACTGAAATCAGTTTCATTGGAGGTGATGTTGATGAA CATCCTGCGAGTGAGTGTAAACCTGACATCAGGAGGACAACAGCTCAAGCAAATGACTGC AGGGTGACAACCAAATGGGTTGGCTTTGATCGGATATTGAAGTCAAACAACCAGAAATCC GACAGCATTAACCTTGATCATCTACCTCCATACTCCTTTGAAACTCAAGCCGTTTGGGTA CAGATTCCTGTGTCAGTAAGGACGACTATGGAGCAGATGGAATATCAGCTCTGTGGTGGT GTACACGCTGCTTCTCATGCGCTTCTAAGTATAATACCTCTGCACATGATGTGCAGTGGT TCTGATCTAGGAACACAATGTGCAGAGCCTCAAGAAAATTCTGAAACTGCAGACAGAATT CTGTTGTACGACAAACATCCCGGTGGCATCGGCTTAGCATCACAGGCCAAGCTGCTCTTT GGTGAGCTTCTGGTTGCTGCTTTAGAGCTTGTTTCATCATGCAGCTGCACCAACTCTGAT GGGTGTCCAAATTGCATCCAATCATTTGCATGCAGTGATTACAATAGGGATTTGGACAAG GAAGCTTCAATTTTTCTTCTCAAGGGCGTAATTCAGTATGAAAAGTTGTATTTTGAAGCC ATAGATGGTTGTTACCAGAGCTGA

Peptide Sequence

PEP ID	Os02t0111900-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:646112:649305:1 gene:Os02g0111900 transcript:Os02t0111900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0111900-01)
Sequence	MAQPRVIRVRAHDGRSTTVTIAASATVSDLRTALRSSFAPALVSPDFHLFLKGTKLIADA KVGNLPVGPGESISFIPVNAKSAPPHPPSSSAPNPWRKRKFSWHDGGGEDIYAKKPTNPA PPRPLSCHGTQPLDPTQMVEHLRQGLGKAGQITHVEEIPGREATFAELPGHLSSSMRDAL RSIGVTKLYAHQAQAVQSAVSGEHVVVSTSTSSGKSLCYNIPVLESISQSSAPCALYIFP TKALAQDQLKTLLEMKPAFRSDFDVSIYDGDTAMKDRTRIRNTARLLITNPDMLHMSILP CHAQFKRVLFNLKYIVIDEAHSYKGAFGCHAALILRRLKRICSYVYGSNPTFIFCTATLA NPREHVMELANLDRVVLVDNDTSPCGSKNFLLWNPPLQLAKAEDRRPNPVLEVSYLFAEM VQHGLRAIAFCKTRKMCEQVLMQTRQILKETAAELVNSICVYRGGYVASDRRKIEADLFG GILRGVAATNALELGIDVGHIDATLHLGFPGSMASFWQQAGRSGRRAKQSIAVYVAFEGA LDQYFMRSPHKLFGKPIEHCQVDSQNRKVLEQHLACAASEYPLRQEHDESYFGFSMNSVL MTLKDKGCLMNNPSGGDSGVWKYIGPDKKPSHSVSIRAIEHHRYKVIDRRSNRVLEEIEE SKAFFQVYDGAVYMHQGVSYLVDKLDLTSRIAYCKVFDLNYYTKVQDYTEISFIGGDVDE HPASECKPDIRRTTAQANDCRVTTKWVGFDRILKSNNQKSDSINLDHLPPYSFETQAVWV QIPVSVRTTMEQMEYQLCGGVHAASHALLSIIPLHMMCSGSDLGTQCAEPQENSETADRI LLYDKHPGGIGLASQAKLLFGELLVAALELVSSCSCTNSDGCPNCIQSFACSDYNRDLDK EASIFLLKGVIQYEKLYFEAIDGCYQS

Transcript Sequence

Transcript ID	Os02t0111900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:646112:649305:1 gene:Os02g0111900 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0111900-01)
Sequence	GATGAGTGCGCGGCGCCGGCTAAACGGCGGCAGCACGCCACCGGCGATGTCGGCCACGTT CAAACTTCACAGCATCGGAGTTGGTTTCTATGTGGAGTATCGCAGCAGATCCGATTCCGA TGCGGCATTGCGCGTAATTTGGCTATAAATCCGCCGCGGATTTCCTTCCTCCGCAACGGC GACGGCAATGGCGCAGCCGAGAGTCATCCGGGTGCGCGCCCACGACGGGCGCTCCACCAC CGTCACGATCGCCGCCTCCGCCACCGTCAGCGACCTCAGGACGGCGCTCCGTTCCTCCTT CGCTCCCGCGCTGGTTTCCCCCGACTTCCACCTCTTCCTCAAGGGCACCAAGCTCATCGC CGACGCCAAGGTCGGCAACCTCCCCGTCGGCCCCGGCGAGTCCATCTCTTTCATCCCGGT CAACGCCAAGTCAGCGCCGCCGCACCCTCCGTCGTCGAGCGCGCCGAATCCATGGAGGAA ACGCAAGTTTTCTTGGCACGACGGCGGCGGCGAAGACATCTACGCCAAGAAGCCGACGAA CCCAGCGCCGCCGAGGCCGCTCTCCTGCCATGGCACCCAACCTCTCGACCCTACCCAAAT GGTGGAGCATCTCAGGCAAGGGCTCGGGAAGGCCGGACAGATCACCCATGTCGAGGAGAT CCCGGGAAGGGAGGCGACGTTCGCCGAACTCCCCGGCCACCTCTCGTCCTCCATGAGGGA CGCGCTGAGAAGCATCGGCGTCACCAAGCTGTACGCCCACCAGGCGCAGGCCGTGCAATC CGCCGTCTCCGGCGAGCACGTCGTGGTGTCCACCTCGACGTCGAGCGGCAAGTCGCTGTG CTACAACATCCCCGTCCTCGAGTCCATCTCCCAGAGCTCCGCGCCATGCGCGCTCTACAT CTTCCCCACCAAGGCTCTGGCCCAAGACCAGCTCAAGACACTGCTCGAGATGAAGCCGGC GTTCCGCTCAGACTTCGACGTCAGCATCTACGACGGCGACACCGCCATGAAAGACCGGAC AAGGATCAGGAACACCGCGAGGCTGCTGATCACCAACCCTGACATGCTCCACATGTCGAT CTTGCCATGCCATGCTCAGTTCAAGAGGGTCCTCTTCAACCTCAAGTACATTGTCATCGA CGAGGCGCATTCCTACAAGGGCGCATTTGGCTGCCACGCTGCGTTGATTCTGAGAAGATT AAAGCGCATCTGTTCATATGTTTATGGAAGCAATCCAACATTCATATTCTGCACCGCGAC ATTGGCCAATCCGAGGGAGCATGTCATGGAGCTGGCAAATCTTGATCGAGTCGTGCTGGT TGATAATGACACGAGTCCTTGCGGCTCAAAGAACTTCCTCCTGTGGAATCCGCCATTGCA ATTGGCGAAAGCAGAAGACAGAAGACCAAACCCAGTACTAGAGGTTTCCTATCTGTTCGC CGAGATGGTTCAGCATGGGCTTCGTGCCATCGCCTTCTGCAAGACGAGGAAGATGTGTGA GCAGGTGCTAATGCAGACGCGTCAGATTCTTAAGGAGACAGCTGCAGAATTGGTGAATTC TATCTGTGTCTACCGTGGTGGCTATGTTGCGAGTGACAGGAGGAAGATCGAGGCTGATCT CTTCGGTGGAATTCTTCGCGGCGTCGCGGCTACCAATGCTCTTGAGCTGGGGATCGATGT CGGGCACATCGATGCGACGCTGCACCTGGGATTTCCTGGAAGCATGGCTAGCTTCTGGCA GCAGGCAGGGAGATCAGGGAGAAGAGCAAAGCAGTCCATAGCTGTTTATGTAGCCTTTGA GGGTGCTCTTGACCAGTACTTCATGAGATCACCACACAAGCTGTTTGGCAAGCCCATTGA GCACTGCCAGGTTGATTCACAAAACCGCAAGGTTCTTGAACAGCATCTCGCTTGCGCCGC TTCTGAATATCCACTGCGTCAGGAACATGACGAGAGCTACTTTGGTTTTAGCATGAACAG TGTTTTGATGACACTGAAAGATAAGGGCTGTCTCATGAACAATCCATCTGGAGGAGATTC AGGCGTGTGGAAGTATATTGGACCTGATAAAAAACCTTCTCATAGTGTAAGCATACGGGC AATTGAGCATCACAGGTACAAGGTGATCGACAGGAGAAGCAATCGAGTTCTTGAAGAGAT TGAGGAAAGCAAGGCTTTCTTTCAGGTGTATGATGGTGCTGTCTACATGCACCAAGGTGT CAGCTACTTGGTTGATAAGCTTGATCTGACATCAAGGATAGCTTACTGCAAGGTGTTTGA TCTGAACTACTACACCAAAGTTCAGGACTACACTGAAATCAGTTTCATTGGAGGTGATGT TGATGAACATCCTGCGAGTGAGTGTAAACCTGACATCAGGAGGACAACAGCTCAAGCAAA TGACTGCAGGGTGACAACCAAATGGGTTGGCTTTGATCGGATATTGAAGTCAAACAACCA GAAATCCGACAGCATTAACCTTGATCATCTACCTCCATACTCCTTTGAAACTCAAGCCGT TTGGGTACAGATTCCTGTGTCAGTAAGGACGACTATGGAGCAGATGGAATATCAGCTCTG TGGTGGTGTACACGCTGCTTCTCATGCGCTTCTAAGTATAATACCTCTGCACATGATGTG CAGTGGTTCTGATCTAGGAACACAATGTGCAGAGCCTCAAGAAAATTCTGAAACTGCAGA CAGAATTCTGTTGTACGACAAACATCCCGGTGGCATCGGCTTAGCATCACAGGCCAAGCT GCTCTTTGGTGAGCTTCTGGTTGCTGCTTTAGAGCTTGTTTCATCATGCAGCTGCACCAA CTCTGATGGGTGTCCAAATTGCATCCAATCATTTGCATGCAGTGATTACAATAGGGATTT GGACAAGGAAGCTTCAATTTTTCTTCTCAAGGGCGTAATTCAGTATGAAAAGTTGTATTT TGAAGCCATAGATGGTTGTTACCAGAGCTGAAGTGCAAATGACCTAGTACAAGATATATT TGGATGTAGCACCAACTAACGTGTTTGTTATAGGTGCCAATAGAACTTGAGTGGAAAATA ATGTTAGCGAATATTTGGTTGTAGTGTAGGACACTGCAAAATGCAAATGGTAGTACCGAA CAAAATTTGCGTATCCTTTTATCGCTATGATGTATTTTAGTATTTTTACACTAGTCGTTA ATATTTTTGCAGTC