Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0111800-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:637013:640452:-1 gene:Os02g0111800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCLVATA, CLVATA description:Protein kinase, core domain containing protein. (Os02t0111800-02)
Sequence	ATGGAAGCTACAGTGCCAGTGCTGCTGCTAGTGACAGTGCTGTCTTTGATCTTGCCCTCC GGCATTGGCGCCGCCGCCGCCGGCGACGAGCGGTCGGCGCTTCTCGCCTTGAAGGCGGGC TTCGTCGACACGGTGAGCGCGCTCGCCGACTGGACCGACGGCGGCAAGGCGTCGCCGCAT TGCAAGTGGACCGGCGTCGGGTGCAACGCCGCCGGCCTCGTCGATCGGCTCGAGCTCTCC GGCAAGAACCTGAGCGGCAAGGTCGCCGACGACGTGTTCCGGCTGCCGGCGCTCGCGGTG CTCAACATCTCCAACAACGCCTTCGCCACCACGCTGCCCAAGTCCCTGCCGTCGCTGCCC AGTCTCAAGGTGTTCGACGTGAGCCAGAACTCCTTCGAGGGCGGCTTCCCCGCCGGCCTC GGCGGCTGCGCTGACCTCGTCGCCGTCAACGCCTCCGGCAACAACTTCGCCGGTCCCCTC CCCGAGGACCTCGCCAATGCCACGTCCCTGGAGACCATCGACATGCGTGGGAGCTTCTTC GGCGGCGCCATCCCCGCGGCTTACCGGAGCCTCACCAAGCTCAAGTTCTTGGGACTCTCC GGCAACAACATCACCGGCAAGATCCCGCCGGAGATCGGCGAGATGGAGTCCCTCGAGAGC CTCATCATTGGGTACAATGAGCTCGAGGGTGGCATCCCGCCGGAGCTCGGTAACCTCGCC AATCTCCAGTACCTCGACCTCGCCGTCGGCAACCTCGACGGGCCCATCCCGCCGGAGCTA GGGAAGCTTCCGGCGCTCACCTCCCTCTACCTCTACAAGAACAACCTCGAGGGCAAGATA CCACCGGAGCTCGGCAACATCTCGACGCTGGTCTTCCTCGACCTCTCCGACAACGCGTTC ACCGGCGCGATACCCGACGAGGTGGCGCAGCTGAGCCACCTCCGGCTGCTCAACCTCATG TGCAACCACCTCGACGGCGTCGTGCCGGCGGCCATCGGAGACATGCCGAAGCTGGAGGTG CTCGAGCTGTGGAACAACTCGTTGACGGGGTCGCTCCCGGCGTCGCTCGGCCGGAGCTCG CCGCTGCAGTGGGTGGACGTGTCGTCGAACGGATTCACCGGCGGCATCCCGGCCGGGATC TGCGACGGCAAGGCGCTCATCAAGCTGATCATGTTCAACAACGGCTTCACCGGCGGCATC CCGGCCGGGCTCGCGTCGTGCGCGTCGCTGGTGCGGGTGCGCGTGCACGGCAACCGGCTC AACGGCACGATCCCCGTCGGGTTCGGGAAGCTGCCGCTGCTGCAGCGGCTCGAGCTCGCC GGCAACGACCTATCCGGCGAGATCCCCGGCGACCTCGCGTCGTCGGCGTCGCTGTCGTTC ATCGACGTGTCGCGCAACCACCTCCAGTACTCCATCCCCTCGAGCCTCTTCACCATCCCG ACCTTGCAGAGCTTCCTCGCGTCGGACAACATGATCTCCGGCGAGCTCCCCGACCAGTTC CAGGACTGCCCGGCGCTCGCCGCGCTGGACCTGTCCAACAACCGGCTCGCCGGCGCGATC CCGTCCAGCCTGGCCTCGTGCCAGAGGCTGGTCAAGCTCAACCTGCGGCGGAACAAGCTC GCCGGCGAGATACCTCGCTCGCTCGCCAACATGCCGGCGCTCGCCATTCTTGATCTATCG AGCAACGTTCTCACCGGCGGCATACCGGAGAATTTCGGGAGCTCGCCGGCGCTCGAGACG CTCAACCTGGCGTACAACAACCTAACCGGGCCCGTGCCGGGCAACGGCGTGCTGCGCTCG ATCAACCCCGACGAGCTGGCCGGCAATGCCGGGCTGTGCGGCGGCGTGCTCCCGCCGTGC TCCGGCAGCCGTTCCACCGCCGCCGGGCCGCGCTCTCGCGGCAGCGCCCGGCTCAGGCAC ATCGCGGTGGGGTGGCTGGTCGGCATGGTCGCCGTCGTGGCCGCGTTCGCGGCGCTGTTC GGCGGGCACTACGCGTACCGGCGGTGGTACGTGGACGGCGCGGGTTGCTGCGACGACGAG AACCTCGGCGGCGAGTCGGGGGCGTGGCCGTGGCGACTGACGGCGTTCCAGCGGCTGGGG TTCACGTGCGCCGAGGTGCTCGCGTGCGTGAAGGAGGCGAACGTGGTGGGCATGGGCGCC ACCGGCGTCGTCTACAAGGCCGAGCTCCCCCGCGCGCGCGCCGTGATCGCCGTGAAGAAG CTATGGCGACCAGCCGCCGCCGCCGAGGCCGCCGCCGCCGCGCCGGAGCTGACGGCGGAG GTGCTGAAGGAGGTGGGCCTCCTCGGCCGGCTCCGGCACCGGAACATCGTGCGCCTCCTC GGCTACATGCACAACGAGGCCGACGCCATGATGCTGTACGAGTTCATGCCCAATGGCAGC CTATGGGAGGCGCTGCACGGGCCGCCGGAGCGGCGCACGCTGGTGGACTGGGTGTCGCGC TACGACGTGGCCGCCGGCGTGGCGCAGGGGCTCGCCTACCTCCACCACGACTGCCACCCT CCGGTGATCCACCGCGACATCAAGTCCAACAACATCCTCCTCGACGCCAACATGGAGGCG CGCATCGCCGACTTCGGGCTGGCGCGTGCGCTGGGGCGCGCCGGCGAGTCGGTGTCGGTG GTGGCCGGGTCGTACGGGTACATCGCGCCGGAGTACGGGTACACGATGAAGGTGGACCAG AAGAGCGACACGTACAGCTACGGCGTGGTGCTGATGGAGCTCATCACCGGGAGGAGGGCG GTGGAGGCGGCGTTCGGCGAGGGGCAGGACATCGTCGGCTGGGTGCGCAACAAGATCCGG AGCAACACGGTGGAGGACCACCTCGACGGCCAGCTCGTCGGCGCCGGCTGCCCGCACGTC AGGGAGGAGATGCTGCTGGTGCTCCGCATCGCCGTGCTCTGCACCGCCAGGTTGCCGCGC GACAGGCCGTCCATGCGCGACGTCATCACCATGCTCGGCGAGGCCAAGCCGCGCCGCAAG AGCGGCAGCTCCACCGGCAGCGCCAGCGCCAAAGCCCCCACTCCGGCGCCGCCGGCGGTG GCGGCGGTGGTGGACAAGGACAAGCCGGTGTTCACCACGACGCCGGACTCCGACTACGCT TAG

Peptide Sequence

PEP ID	Os02t0111800-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:637013:640452:-1 gene:Os02g0111800 transcript:Os02t0111800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCLVATA, CLVATA description:Protein kinase, core domain containing protein. (Os02t0111800-02)
Sequence	MEATVPVLLLVTVLSLILPSGIGAAAAGDERSALLALKAGFVDTVSALADWTDGGKASPH CKWTGVGCNAAGLVDRLELSGKNLSGKVADDVFRLPALAVLNISNNAFATTLPKSLPSLP SLKVFDVSQNSFEGGFPAGLGGCADLVAVNASGNNFAGPLPEDLANATSLETIDMRGSFF GGAIPAAYRSLTKLKFLGLSGNNITGKIPPEIGEMESLESLIIGYNELEGGIPPELGNLA NLQYLDLAVGNLDGPIPPELGKLPALTSLYLYKNNLEGKIPPELGNISTLVFLDLSDNAF TGAIPDEVAQLSHLRLLNLMCNHLDGVVPAAIGDMPKLEVLELWNNSLTGSLPASLGRSS PLQWVDVSSNGFTGGIPAGICDGKALIKLIMFNNGFTGGIPAGLASCASLVRVRVHGNRL NGTIPVGFGKLPLLQRLELAGNDLSGEIPGDLASSASLSFIDVSRNHLQYSIPSSLFTIP TLQSFLASDNMISGELPDQFQDCPALAALDLSNNRLAGAIPSSLASCQRLVKLNLRRNKL AGEIPRSLANMPALAILDLSSNVLTGGIPENFGSSPALETLNLAYNNLTGPVPGNGVLRS INPDELAGNAGLCGGVLPPCSGSRSTAAGPRSRGSARLRHIAVGWLVGMVAVVAAFAALF GGHYAYRRWYVDGAGCCDDENLGGESGAWPWRLTAFQRLGFTCAEVLACVKEANVVGMGA TGVVYKAELPRARAVIAVKKLWRPAAAAEAAAAAPELTAEVLKEVGLLGRLRHRNIVRLL GYMHNEADAMMLYEFMPNGSLWEALHGPPERRTLVDWVSRYDVAAGVAQGLAYLHHDCHP PVIHRDIKSNNILLDANMEARIADFGLARALGRAGESVSVVAGSYGYIAPEYGYTMKVDQ KSDTYSYGVVLMELITGRRAVEAAFGEGQDIVGWVRNKIRSNTVEDHLDGQLVGAGCPHV REEMLLVLRIAVLCTARLPRDRPSMRDVITMLGEAKPRRKSGSSTGSASAKAPTPAPPAV AAVVDKDKPVFTTTPDSDYA

Transcript Sequence

Transcript ID	Os02t0111800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:637013:640452:-1 gene:Os02g0111800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsCLVATA, CLVATA description:Protein kinase, core domain containing protein. (Os02t0111800-02)
Sequence	AGCTTGCTAGCTGCTGCAGCCTCTGCTCTTCCTGCAGATGCAATCAGTGCAGTAAACTAA ATTAAGCAGAGCAGACACTGCACTGACATGGCACAGCACTAGAAGCAGCAGAGGCAGAGC AAGCAGAGGAAGCAGAGCTAGTGCTCTCCAAGCTCAGCAAAGGTGCTTCCATTTTTGTTC CAATTTCCAATGGAAGCTACAGTGCCAGTGCTGCTGCTAGTGACAGTGCTGTCTTTGATC TTGCCCTCCGGCATTGGCGCCGCCGCCGCCGGCGACGAGCGGTCGGCGCTTCTCGCCTTG AAGGCGGGCTTCGTCGACACGGTGAGCGCGCTCGCCGACTGGACCGACGGCGGCAAGGCG TCGCCGCATTGCAAGTGGACCGGCGTCGGGTGCAACGCCGCCGGCCTCGTCGATCGGCTC GAGCTCTCCGGCAAGAACCTGAGCGGCAAGGTCGCCGACGACGTGTTCCGGCTGCCGGCG CTCGCGGTGCTCAACATCTCCAACAACGCCTTCGCCACCACGCTGCCCAAGTCCCTGCCG TCGCTGCCCAGTCTCAAGGTGTTCGACGTGAGCCAGAACTCCTTCGAGGGCGGCTTCCCC GCCGGCCTCGGCGGCTGCGCTGACCTCGTCGCCGTCAACGCCTCCGGCAACAACTTCGCC GGTCCCCTCCCCGAGGACCTCGCCAATGCCACGTCCCTGGAGACCATCGACATGCGTGGG AGCTTCTTCGGCGGCGCCATCCCCGCGGCTTACCGGAGCCTCACCAAGCTCAAGTTCTTG GGACTCTCCGGCAACAACATCACCGGCAAGATCCCGCCGGAGATCGGCGAGATGGAGTCC CTCGAGAGCCTCATCATTGGGTACAATGAGCTCGAGGGTGGCATCCCGCCGGAGCTCGGT AACCTCGCCAATCTCCAGTACCTCGACCTCGCCGTCGGCAACCTCGACGGGCCCATCCCG CCGGAGCTAGGGAAGCTTCCGGCGCTCACCTCCCTCTACCTCTACAAGAACAACCTCGAG GGCAAGATACCACCGGAGCTCGGCAACATCTCGACGCTGGTCTTCCTCGACCTCTCCGAC AACGCGTTCACCGGCGCGATACCCGACGAGGTGGCGCAGCTGAGCCACCTCCGGCTGCTC AACCTCATGTGCAACCACCTCGACGGCGTCGTGCCGGCGGCCATCGGAGACATGCCGAAG CTGGAGGTGCTCGAGCTGTGGAACAACTCGTTGACGGGGTCGCTCCCGGCGTCGCTCGGC CGGAGCTCGCCGCTGCAGTGGGTGGACGTGTCGTCGAACGGATTCACCGGCGGCATCCCG GCCGGGATCTGCGACGGCAAGGCGCTCATCAAGCTGATCATGTTCAACAACGGCTTCACC GGCGGCATCCCGGCCGGGCTCGCGTCGTGCGCGTCGCTGGTGCGGGTGCGCGTGCACGGC AACCGGCTCAACGGCACGATCCCCGTCGGGTTCGGGAAGCTGCCGCTGCTGCAGCGGCTC GAGCTCGCCGGCAACGACCTATCCGGCGAGATCCCCGGCGACCTCGCGTCGTCGGCGTCG CTGTCGTTCATCGACGTGTCGCGCAACCACCTCCAGTACTCCATCCCCTCGAGCCTCTTC ACCATCCCGACCTTGCAGAGCTTCCTCGCGTCGGACAACATGATCTCCGGCGAGCTCCCC GACCAGTTCCAGGACTGCCCGGCGCTCGCCGCGCTGGACCTGTCCAACAACCGGCTCGCC GGCGCGATCCCGTCCAGCCTGGCCTCGTGCCAGAGGCTGGTCAAGCTCAACCTGCGGCGG AACAAGCTCGCCGGCGAGATACCTCGCTCGCTCGCCAACATGCCGGCGCTCGCCATTCTT GATCTATCGAGCAACGTTCTCACCGGCGGCATACCGGAGAATTTCGGGAGCTCGCCGGCG CTCGAGACGCTCAACCTGGCGTACAACAACCTAACCGGGCCCGTGCCGGGCAACGGCGTG CTGCGCTCGATCAACCCCGACGAGCTGGCCGGCAATGCCGGGCTGTGCGGCGGCGTGCTC CCGCCGTGCTCCGGCAGCCGTTCCACCGCCGCCGGGCCGCGCTCTCGCGGCAGCGCCCGG CTCAGGCACATCGCGGTGGGGTGGCTGGTCGGCATGGTCGCCGTCGTGGCCGCGTTCGCG GCGCTGTTCGGCGGGCACTACGCGTACCGGCGGTGGTACGTGGACGGCGCGGGTTGCTGC GACGACGAGAACCTCGGCGGCGAGTCGGGGGCGTGGCCGTGGCGACTGACGGCGTTCCAG CGGCTGGGGTTCACGTGCGCCGAGGTGCTCGCGTGCGTGAAGGAGGCGAACGTGGTGGGC ATGGGCGCCACCGGCGTCGTCTACAAGGCCGAGCTCCCCCGCGCGCGCGCCGTGATCGCC GTGAAGAAGCTATGGCGACCAGCCGCCGCCGCCGAGGCCGCCGCCGCCGCGCCGGAGCTG ACGGCGGAGGTGCTGAAGGAGGTGGGCCTCCTCGGCCGGCTCCGGCACCGGAACATCGTG CGCCTCCTCGGCTACATGCACAACGAGGCCGACGCCATGATGCTGTACGAGTTCATGCCC AATGGCAGCCTATGGGAGGCGCTGCACGGGCCGCCGGAGCGGCGCACGCTGGTGGACTGG GTGTCGCGCTACGACGTGGCCGCCGGCGTGGCGCAGGGGCTCGCCTACCTCCACCACGAC TGCCACCCTCCGGTGATCCACCGCGACATCAAGTCCAACAACATCCTCCTCGACGCCAAC ATGGAGGCGCGCATCGCCGACTTCGGGCTGGCGCGTGCGCTGGGGCGCGCCGGCGAGTCG GTGTCGGTGGTGGCCGGGTCGTACGGGTACATCGCGCCGGAGTACGGGTACACGATGAAG GTGGACCAGAAGAGCGACACGTACAGCTACGGCGTGGTGCTGATGGAGCTCATCACCGGG AGGAGGGCGGTGGAGGCGGCGTTCGGCGAGGGGCAGGACATCGTCGGCTGGGTGCGCAAC AAGATCCGGAGCAACACGGTGGAGGACCACCTCGACGGCCAGCTCGTCGGCGCCGGCTGC CCGCACGTCAGGGAGGAGATGCTGCTGGTGCTCCGCATCGCCGTGCTCTGCACCGCCAGG TTGCCGCGCGACAGGCCGTCCATGCGCGACGTCATCACCATGCTCGGCGAGGCCAAGCCG CGCCGCAAGAGCGGCAGCTCCACCGGCAGCGCCAGCGCCAAAGCCCCCACTCCGGCGCCG CCGGCGGTGGCGGCGGTGGTGGACAAGGACAAGCCGGTGTTCACCACGACGCCGGACTCC GACTACGCTTAGCTGTGTCCATTTTCTTTCTTCCTTTTTTTTTTCTTCGGTGCATGTTAA TGATTTGTTCATGTATGTAGATTATTCTAAAAAAATTGTAAGAATTTTGAGCTTGTAACA AACCAACAACCATTTTCTGT