Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0109800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:534963:538203:-1 gene:Os02g0109800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os02t0109800-01)
Sequence	ATGCCGGGCCTCGCCGCGGCCGACAACTCGCCACCGGTGGCGGCCCCGCCGCCGAGGCGG CTGTCGTCGCCGCTGCCCAGGAGCCGGGCGCCGCCGTCGCCGTCGCCTTCCACCTCGTCG CGGGCCAAGCCCAGGAAGGTGGCGGCGCAGCCGGAGACGGACGAGGCGGCGCTCGACAAC CCGGATCTGGGGCCCTTCCTGCTCAAGCAGGCCCGCGACGCCATGGTCTCGGGGGAGGGC GGGGGCGCCGCGCGCGCGCTCGAGTTCGCCGAGAGGGCCGCCCGCGCGCTCGAGCGCCGC GGCGAGGGGGCCGAGCTCGAGCTCGCCATGAGCCTCCACGTCGCCGCCGCCATCCACTGC GGCCTCGGCAGGCACGCCGACGCCATCCCTGTCCTCGAGCGCGCCGTCGCCGTCGTCACG CCGCCTCCGCCTCCGCCGCCGCCTGAGGGTGAGAGCTCGGCGGAGGAGCAGCCGCCCGAG GACCAGCAGAAGGGGGAGGAGTGGGCCCTCGCCGCCTTCTCCGGCTGGATGCAGCTCGGC GACACCCACGCCATGCTCGGCCGCATGGACGAGTCCATCGCCTGCTACGGCAAGGGCCTC GAGATCCAGATGGCCGCGCTCGGCGAGCGTGATCCCCGCGTCGCCGAGACCTGCAGGTAT TTGGCGGAAGCGCATGTGCAAGCCCTGCAGTTCGATGAAGCAGAGAAGTTGTGCCGCAAA GCCCTCGAGATCCACCGGGAGCACAGCGCTCCCGCTTCGCTCGAGGAGGCCTCCGACCGC CGCCTGATGGCACTCATCCTTGACGCCAAGGGTGACTATGATGGTGCCCTGGAGCACCTT GTGCTTGCCTCCATGACCATGGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGAT GTCGCGATAGGCAACACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTAC CAGAAGGCGTTGACAGTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCT GTCTTTGTCCGCCTCGCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCC TACTGTGAGAATGCACTCCGTGTCTATGCAAAGCCCGCGCCTGGCGCTGCCCCTGATGAG GTTGCTGGAGGCCTAATGGAGATTGCTGCCATCTATGAGGCGCTTGGAGACCTTGATGAG GCACTGAAGCTTTTGCAAAGGGCACTAAAGTTGCTTGAGGACTCACCAGGACAGTGGAGC ACTGTTGCTGGCATCGAGGCACAAATGGGTGTGTTGTACTACATGGTAGGGAGGTATGCC GATTCAAGGAACTCATTTGAAAATGCGGTTGCCAAATTGAGAGCTAGCGGGGAGAGGAAG TCGGCATTTTTTGGAGTTCTGTTGAACCAGATGGGGCTAGCTTGTGTGCAGCTATTCAAG ATTGATGAGGCTGCACAGTTGTTTGAAGAGGCAAGGGCAGTTCTAGAACAGGAGTGTGGT GCCTCTCATCCAGATACTCTCGGCGTCTACAGTAATTTGGCTGCAATCTACGATGCTATG GGCAGGGTTGAGGACGCCATTGAAATACTGGAACACGTACTTAAGGTGAGGGAAGAGAAG CTCGGCACAGCAAACCCGGATGTCGAGGACGAGAAGCTAAGGCTTGCGGAGCTTCTGAAG GAGGCAGGGCGGTCCCGGAACAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAAC TCGCAGCGTGTTAAGAAAGATGCTGGGAGGAGGTGGTCCAACTTTGGCTTCAGGAGTTGA

Peptide Sequence

PEP ID	Os02t0109800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:534963:538203:-1 gene:Os02g0109800 transcript:Os02t0109800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os02t0109800-01)
Sequence	MPGLAAADNSPPVAAPPPRRLSSPLPRSRAPPSPSPSTSSRAKPRKVAAQPETDEAALDN PDLGPFLLKQARDAMVSGEGGGAARALEFAERAARALERRGEGAELELAMSLHVAAAIHC GLGRHADAIPVLERAVAVVTPPPPPPPPEGESSAEEQPPEDQQKGEEWALAAFSGWMQLG DTHAMLGRMDESIACYGKGLEIQMAALGERDPRVAETCRYLAEAHVQALQFDEAEKLCRK ALEIHREHSAPASLEEASDRRLMALILDAKGDYDGALEHLVLASMTMVANGRDIEVATID VAIGNTYLALARFDEAVFSYQKALTVLKSARGDDHPSVASVFVRLADLYHRTGRLRESKS YCENALRVYAKPAPGAAPDEVAGGLMEIAAIYEALGDLDEALKLLQRALKLLEDSPGQWS TVAGIEAQMGVLYYMVGRYADSRNSFENAVAKLRASGERKSAFFGVLLNQMGLACVQLFK IDEAAQLFEEARAVLEQECGASHPDTLGVYSNLAAIYDAMGRVEDAIEILEHVLKVREEK LGTANPDVEDEKLRLAELLKEAGRSRNRKQKSLENLFVTNSQRVKKDAGRRWSNFGFRS

Transcript Sequence

Transcript ID	Os02t0109800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:534963:538203:-1 gene:Os02g0109800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os02t0109800-01)
Sequence	TGTGTCCCTCTCTGACTCCCCACCTCGCGCTCGCCTCACCCGACCATGCCGGGCCTCGCC GCGGCCGACAACTCGCCACCGGTGGCGGCCCCGCCGCCGAGGCGGCTGTCGTCGCCGCTG CCCAGGAGCCGGGCGCCGCCGTCGCCGTCGCCTTCCACCTCGTCGCGGGCCAAGCCCAGG AAGGTGGCGGCGCAGCCGGAGACGGACGAGGCGGCGCTCGACAACCCGGATCTGGGGCCC TTCCTGCTCAAGCAGGCCCGCGACGCCATGGTCTCGGGGGAGGGCGGGGGCGCCGCGCGC GCGCTCGAGTTCGCCGAGAGGGCCGCCCGCGCGCTCGAGCGCCGCGGCGAGGGGGCCGAG CTCGAGCTCGCCATGAGCCTCCACGTCGCCGCCGCCATCCACTGCGGCCTCGGCAGGCAC GCCGACGCCATCCCTGTCCTCGAGCGCGCCGTCGCCGTCGTCACGCCGCCTCCGCCTCCG CCGCCGCCTGAGGGTGAGAGCTCGGCGGAGGAGCAGCCGCCCGAGGACCAGCAGAAGGGG GAGGAGTGGGCCCTCGCCGCCTTCTCCGGCTGGATGCAGCTCGGCGACACCCACGCCATG CTCGGCCGCATGGACGAGTCCATCGCCTGCTACGGCAAGGGCCTCGAGATCCAGATGGCC GCGCTCGGCGAGCGTGATCCCCGCGTCGCCGAGACCTGCAGGTATTTGGCGGAAGCGCAT GTGCAAGCCCTGCAGTTCGATGAAGCAGAGAAGTTGTGCCGCAAAGCCCTCGAGATCCAC CGGGAGCACAGCGCTCCCGCTTCGCTCGAGGAGGCCTCCGACCGCCGCCTGATGGCACTC ATCCTTGACGCCAAGGGTGACTATGATGGTGCCCTGGAGCACCTTGTGCTTGCCTCCATG ACCATGGTCGCCAATGGACGTGACATTGAGGTCGCGACGATCGATGTCGCGATAGGCAAC ACCTACCTTGCCCTCGCCCGCTTCGACGAGGCTGTCTTCTCCTACCAGAAGGCGTTGACA GTACTCAAGTCTGCCCGTGGTGATGACCACCCTTCGGTTGCATCTGTCTTTGTCCGCCTC GCAGACCTTTACCACCGAACAGGGAGGCTCCGCGAGTCCAAATCCTACTGTGAGAATGCA CTCCGTGTCTATGCAAAGCCCGCGCCTGGCGCTGCCCCTGATGAGGTTGCTGGAGGCCTA ATGGAGATTGCTGCCATCTATGAGGCGCTTGGAGACCTTGATGAGGCACTGAAGCTTTTG CAAAGGGCACTAAAGTTGCTTGAGGACTCACCAGGACAGTGGAGCACTGTTGCTGGCATC GAGGCACAAATGGGTGTGTTGTACTACATGGTAGGGAGGTATGCCGATTCAAGGAACTCA TTTGAAAATGCGGTTGCCAAATTGAGAGCTAGCGGGGAGAGGAAGTCGGCATTTTTTGGA GTTCTGTTGAACCAGATGGGGCTAGCTTGTGTGCAGCTATTCAAGATTGATGAGGCTGCA CAGTTGTTTGAAGAGGCAAGGGCAGTTCTAGAACAGGAGTGTGGTGCCTCTCATCCAGAT ACTCTCGGCGTCTACAGTAATTTGGCTGCAATCTACGATGCTATGGGCAGGGTTGAGGAC GCCATTGAAATACTGGAACACGTACTTAAGGTGAGGGAAGAGAAGCTCGGCACAGCAAAC CCGGATGTCGAGGACGAGAAGCTAAGGCTTGCGGAGCTTCTGAAGGAGGCAGGGCGGTCC CGGAACAGGAAGCAGAAATCGCTGGAAAACCTTTTCGTGACCAACTCGCAGCGTGTTAAG AAAGATGCTGGGAGGAGGTGGTCCAACTTTGGCTTCAGGAGTTGAGGAACACACCCTCAC CTCACCTGGTGATGGAGGGTGGCCTTTGTAACATAAAGGGAAGAAGAAGAAAAAACCACA TGTGTAAAGGTGTTGTAGACTAGGAAGAATATGATGATGATTGTGTTTGCCGTTTGAGAT TCTAAAATGCCATTGTTGTGAATTACAGCTCGCTATTATCTCGAGTATTTTTTTTTCTCC CCCACAGTTTTAACTGGTTCTTAGTGTTGTATTTGGATAATGTATTGATTTGTGCTGGTG GTTGATGATGAATTAATACTACTACTGTTACCACCTGTGATGTGATTTGTTTGTCAC