Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0106300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:350795:354294:-1 gene:Os02g0106300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0106300-01)
Sequence	ATGACCCACGCCGCCCACGCGCTATGCAACCGCTACGCCGCCATCCTCTCCTCCGCCGCC GGCGACGGCGGCCGGACCGGGGTTCGCGTGGCCGGCGCTGTGCACTGCCTCATTCTCAAG ACGTTTCTCCAGGCTCCCCCAACCTTCCTCCTCAACCACCTCCTCACCGCCTACGCCAAG TCCGGCCGCCTCGCCCGAGCCCGCCGCGTGTTCGACGAAATGCCCGACCCCAACCTCTTC ACCCGCAACGCCCTCCTCTCGGCGCTCGCCCACTCAAGGCTCGTCCCGGACATGGAGCGC CTCTTCGCCTCGATGCCCGAGCGGGACGCCGTCTCCTACAACGCGCTCATCACCGGCTTC TCCAGCACCGGCTCTCCTGCCCGGTCGGTCCAGCTGTACCGCGCGCTGCTCCGGGAGGAG AGCGTCAGGCCAACCCGGATTACTCTGTCGGCGATGATCATGGTCGCTTCGGCTCTCTCC GACCGCGCGCTTGGCCACTCGGTGCATTGCCAGGTACTGCGGCTTGGGTTCGGGGCATAT GCTTTCGTTGGGAGCCCGTTGGTCGATATGTATGCCAAGATGGGCCTCATTAGGGATGCC AGGCGGGTGTTTCAAGAAATGGAGGCCAAGACTGTGGTCATGTACAATACCTTGATCACA GGGCTGCTCCGCTGCAAGATGATCGAGGATGCAAAGGGTTTGTTTCAGCTGATGGTGGAC AGGGATTCCATTACTTGGACTACGATGGTTACAGGACTGACTCAGAACGGTTTGCAGTTG GAGGCTCTTGATGTTTTCAGGAGAATGAGGGCAGAGGGTGTTGGCATTGATCAGTACACT TTCGGAAGCATTCTTACAGCCTGCGGTGCCCTTGCTGCCTTGGAAGAAGGGAAGCAGATA CATGCCTACATAACTCGGACTTGGTATGAAGATAATGTCTTTGTCGGGAGTGCGCTTGTT GACATGTACTCCAAGTGCAGGAGCATCAGATTGGCAGAGGCTGTTTTCAGGAGGATGACA TGCAGAAACATCATATCGTGGACTGCGATGATTGTTGGATATGGACAGAATGCTTGCAGT GAGGAGGCTGTCCGGGCATTCTCAGAGATGCAAATGGATGGCATTAAGCCTGATGATTTC ACTCTAGGCAGTGTTATAAGTTCTTGTGCTAATTTAGCAAGTCTGGAAGAGGGTGCACAG TTCCACTGCCTAGCACTTGTCTCAGGGTTGATGCGGTACATTACAGTGTCCAATGCACTA GTTACCTTGTATGGGAAGTGTGGCAGCATTGAGGATGCACACCGCTTATTTGATGAGATG TCCTTCCACGATCAAGTCTCCTGGACTGCTCTTGTGACAGGGTATGCTCAATTTGGGAAG GCAAAAGAAACTATAGATTTGTTTGAGAAGATGTTGGCAAATGGCTTGAAGCCTGATGGG GTAACATTTATCGGTGTCCTTTCTGCTTGTAGCCGTGCAGGACTTGTAGAGAAAGGGTGC GACTACTTTGATTCCATGCAGAAGGACCACGGTATTGTTCCTATAGATGATCACTACACT TGTATGATTGACTTGTACAGTAGATCAGGGAGGTTCAAAGAGGCTGAGGAATTCATAAAG CAGATGCCACACAGTCCTGATGCCTTTGGATGGGCAACATTGCTGAGCTCGTGTAGGCTG CGTGGGAACATGGAGATTGGCAAGTGGGCAGCTGAGAATCTCTTGGAAACTGACCCACAA AACCCTGCCAGCTATGTGTTGTTGTGTAGCATGCATGCTGCTAAAGGTCAATGGACTGAA GTCGCTCATCTTAGACGTGGAATGAGGGACAGGCAGGTGAAGAAGGAACCAGGCTGCAGT TGGATCAAGTACAAGAACAAAGTTCACATATTTTCAGCCGATGACCAATCCCACCCCTTC TCCAGTAGAATATACGAAAAGCTAGAGTGGCTCAACTCAAAGATGGCTGAAGAAGGATAC AAGCCTGATGTCAGCTCGGTGCTGCATGATGTGGCAGATGCTGATAAGGTTCACATGATT AGCCATCACAGCGAGAAGCTAGCAATTGCCTTTGGCTTAATCTTTGTTCCACAAGAAATG CCAATTCGGATTGTCAAGAATCTACGGGTATGTGTGGATTGTCACAATGCTACCAAGTTC ATTTCTAAGATAACTGGCCGTGATATTCTTGTGAGGGATGCTGTCAGATTTCACAAGTTT AGTGATGGCACGTGCTCGTGCGGAGACTTCTGGTAG

Peptide Sequence

PEP ID	Os02t0106300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:350795:354294:-1 gene:Os02g0106300 transcript:Os02t0106300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0106300-01)
Sequence	MTHAAHALCNRYAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAK SGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGF SSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAY AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQI HAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACS EEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNAL VTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDG VTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIK QMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTE VAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGY KPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKF ISKITGRDILVRDAVRFHKFSDGTCSCGDFW

Transcript Sequence

Transcript ID	Os02t0106300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:350795:354294:-1 gene:Os02g0106300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0106300-01)
Sequence	AGTAAGCGAAAGCCCACGCGCGATGACCCACGCCGCCCACGCGCTATGCAACCGCTACGC CGCCATCCTCTCCTCCGCCGCCGGCGACGGCGGCCGGACCGGGGTTCGCGTGGCCGGCGC TGTGCACTGCCTCATTCTCAAGACGTTTCTCCAGGCTCCCCCAACCTTCCTCCTCAACCA CCTCCTCACCGCCTACGCCAAGTCCGGCCGCCTCGCCCGAGCCCGCCGCGTGTTCGACGA AATGCCCGACCCCAACCTCTTCACCCGCAACGCCCTCCTCTCGGCGCTCGCCCACTCAAG GCTCGTCCCGGACATGGAGCGCCTCTTCGCCTCGATGCCCGAGCGGGACGCCGTCTCCTA CAACGCGCTCATCACCGGCTTCTCCAGCACCGGCTCTCCTGCCCGGTCGGTCCAGCTGTA CCGCGCGCTGCTCCGGGAGGAGAGCGTCAGGCCAACCCGGATTACTCTGTCGGCGATGAT CATGGTCGCTTCGGCTCTCTCCGACCGCGCGCTTGGCCACTCGGTGCATTGCCAGGTACT GCGGCTTGGGTTCGGGGCATATGCTTTCGTTGGGAGCCCGTTGGTCGATATGTATGCCAA GATGGGCCTCATTAGGGATGCCAGGCGGGTGTTTCAAGAAATGGAGGCCAAGACTGTGGT CATGTACAATACCTTGATCACAGGGCTGCTCCGCTGCAAGATGATCGAGGATGCAAAGGG TTTGTTTCAGCTGATGGTGGACAGGGATTCCATTACTTGGACTACGATGGTTACAGGACT GACTCAGAACGGTTTGCAGTTGGAGGCTCTTGATGTTTTCAGGAGAATGAGGGCAGAGGG TGTTGGCATTGATCAGTACACTTTCGGAAGCATTCTTACAGCCTGCGGTGCCCTTGCTGC CTTGGAAGAAGGGAAGCAGATACATGCCTACATAACTCGGACTTGGTATGAAGATAATGT CTTTGTCGGGAGTGCGCTTGTTGACATGTACTCCAAGTGCAGGAGCATCAGATTGGCAGA GGCTGTTTTCAGGAGGATGACATGCAGAAACATCATATCGTGGACTGCGATGATTGTTGG ATATGGACAGAATGCTTGCAGTGAGGAGGCTGTCCGGGCATTCTCAGAGATGCAAATGGA TGGCATTAAGCCTGATGATTTCACTCTAGGCAGTGTTATAAGTTCTTGTGCTAATTTAGC AAGTCTGGAAGAGGGTGCACAGTTCCACTGCCTAGCACTTGTCTCAGGGTTGATGCGGTA CATTACAGTGTCCAATGCACTAGTTACCTTGTATGGGAAGTGTGGCAGCATTGAGGATGC ACACCGCTTATTTGATGAGATGTCCTTCCACGATCAAGTCTCCTGGACTGCTCTTGTGAC AGGGTATGCTCAATTTGGGAAGGCAAAAGAAACTATAGATTTGTTTGAGAAGATGTTGGC AAATGGCTTGAAGCCTGATGGGGTAACATTTATCGGTGTCCTTTCTGCTTGTAGCCGTGC AGGACTTGTAGAGAAAGGGTGCGACTACTTTGATTCCATGCAGAAGGACCACGGTATTGT TCCTATAGATGATCACTACACTTGTATGATTGACTTGTACAGTAGATCAGGGAGGTTCAA AGAGGCTGAGGAATTCATAAAGCAGATGCCACACAGTCCTGATGCCTTTGGATGGGCAAC ATTGCTGAGCTCGTGTAGGCTGCGTGGGAACATGGAGATTGGCAAGTGGGCAGCTGAGAA TCTCTTGGAAACTGACCCACAAAACCCTGCCAGCTATGTGTTGTTGTGTAGCATGCATGC TGCTAAAGGTCAATGGACTGAAGTCGCTCATCTTAGACGTGGAATGAGGGACAGGCAGGT GAAGAAGGAACCAGGCTGCAGTTGGATCAAGTACAAGAACAAAGTTCACATATTTTCAGC CGATGACCAATCCCACCCCTTCTCCAGTAGAATATACGAAAAGCTAGAGTGGCTCAACTC AAAGATGGCTGAAGAAGGATACAAGCCTGATGTCAGCTCGGTGCTGCATGATGTGGCAGA TGCTGATAAGGTTCACATGATTAGCCATCACAGCGAGAAGCTAGCAATTGCCTTTGGCTT AATCTTTGTTCCACAAGAAATGCCAATTCGGATTGTCAAGAATCTACGGGTATGTGTGGA TTGTCACAATGCTACCAAGTTCATTTCTAAGATAACTGGCCGTGATATTCTTGTGAGGGA TGCTGTCAGATTTCACAAGTTTAGTGATGGCACGTGCTCGTGCGGAGACTTCTGGTAGTC ATCCTGTCAATCCAGCTGACAGCCCACATTCTTCTAGTACGAAATACGAACCAGAGTTTT CAGCCTACTTGAAGAAAGGAAAAGGGTTAATCAAGGTCAAATTTAGATCAAATTCTTTGG CTTTCCTGAAATGGGAGAAGGGATCGCTGCGAGCTCCTCCGGTCAGAGCCATTGGCTTTG AGCCATCCAGTTCAATCCAAGTATATAGATCATAATATCTCCAAGGAAGAATTTTTTTCT TGCTTGGATCCGTTAGTGCAGTCAGTAGATGAAGTAGGGAGGGAAGCTACTGCTGCATTT CCTAGCTCACTCTGTAGTTCATAAAGCAGAAAATGTCACTGGTAAAAGGGAAGTATCACC TCCTGAGAAGAAAGGGTAATCTTGTGTATCTCACCCTTCAAAGAAGGCTTTCGAGGGAGG AGTTCAAGGAGGTCGCTATCCATACTCAAAGACATTGGCTAGGCTGCAAGGACTAAAACC TGCAAATTATGATCGATACACCACACTCGCAGCAGCAGCCTAGGTAGTCGAATTCTAGAA AAACTCAACCGCATATGTACATGGATGCAAAATAGTTGGTACACACAATTGCGGTTAGTG CATATATTTCTTCTTTTTTAGTTTTAAATTATTGTTAGGTACTCAGGTGCTACATTTATG TCAATGTCTTATTAATTTCTTATCCATAAGCTTAATCACACCACCCATGAGAT