Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0105200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:287571:293885:1 gene:Os02g0105200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12). (Os02t0105200-01)
Sequence	ATGTCTGCGGCGCACCTCCTCCGCCACTCCCGCAAGCTGCGGACTCTACGTGATGCTCTA GATTATGATCGGTCTGCTCTTGTACGCTACTTCTCCGCTGCTTCTGCATCCTTTCCCACA AAGGGAGGTGCTGCTGCTGGTGTTGAGAAAAGAATTGGTGGCGCCAGATTCCCTCAGTGC AAGCAGCCTGGGAAAGAGCTTGAGACCTTCAAGGTGTCACTAGGAGGACTAAATGGAAGA TATGCTTGTAGAAGAGCACCTAACAATTGTATCCCAACCACTATTACCGGTCTCAACGGT TCATTGTCATGTGGACAGGTGTCTTCAGCAAGATCTTTCTCAAGCAGTGCAGACCTGCCA CCACATCAGGAAATTGGGATGCCATCACTCTCTCCTACAATGACTGAGGGGAACATTGCA AGGTGGCTGAAGAAGGAAGGAGATAAGGTCTCACCTGGTGAAGTTCTCTGTGAGGTGGAG ACGGATAAAGCCACTGTAGAGATGGAGTGCATGGAAGAGGGCTATCTCGCTAAGATCATT CATGGAGATGGTGCCAAAGAGATCAAAGTTGGTGAGATCATTGCTGTAACTGTGGAAGAA GAGGGTGACCTTGAGAAGTTTAAGGATTATAAACCTTCAACTTCAGCTGCACCTGCAGCC CCTTCTGAACCGAAGGCTCAGCCTGAGCCTGCAGAGCCAAAGGTGAAGGAGACAGAGCCT TCCAGGACTCCTGAGCCGAAAGCCCCAAAGACTGAAGAAGCTTCTCAACCAGGGGGTCGA ATATTCTCCAGCCCTCTTGCAAGAAAATTGGCAGAAGATAACAATGTTCCACTGTCAAGC GTAATGGGAACTGGTCCTGATGGGCGAATTTTGAAGGCGGACATTGAAGATTACTTGGCT TCTGTAGCAAAGGGTGGCAAAAGGGAAGCTCTTGCGGCTCCAGGGTTAAGTTACACTGAT GTTCCTAATACTCAGATAAGAAAGGTTACTGCAAACCGCCTGCTAAGCTCTAAACAAACT ATTCCTCATTATTACTTGACAGTTGACGCCCGTGTTGATAATCTTATCAAGTTGCGAGGG GAACTGAATCCGTTGCAAGAGTCATCTGGCGGTAAGAAGATATCTATTAACGATCTTGTT ATAAAGGCTGCAGCTCTGGCTCTTCGAAAGGTCCCTCAGTGTAATAGCTCGTGGATGAGT GATTTTATCCGCCAATACCACAACGTGAACATCAATGTTGCTGTACAGACTGAGCATGGG TTGTTTGTTCCAGTAATTAGGGATGCAGACAAGAAGGGACTTGGTACAATTGCTGAGGAG GTGAAGCAGGTGGCTCAAAGAGCAAGGGATAACAGCTTAAAACCTGAAGATTATGAGGGA GGCACATTCACCATATCAAACCTAGGAGGTCCTTTCGGAATCAAACAATTCTGTGCCATC ATAAATCCTCCTCAGTCAGCAATCTTGGCCATTGGTACTGCTGAGAAGAGGGTGATACCT GGCAGCGTAGACGGCCAGTATGAGTTTGGTTCCTTCATGTCGGCAACAATGAGCTGTGAT CACAGGGTTATTGATGGTGCTATCGGCGCAGAATTTCTGAAAGCATTCAAGGGCTATATC GAGAATCCAAACTCAATGTTACTGTGA

Peptide Sequence

PEP ID	Os02t0105200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:287571:293885:1 gene:Os02g0105200 transcript:Os02t0105200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12). (Os02t0105200-01)
Sequence	MSAAHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTKGGAAAGVEKRIGGARFPQC KQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQVSSARSFSSSADLP PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII HGDGAKEIKVGEIIAVTVEEEGDLEKFKDYKPSTSAAPAAPSEPKAQPEPAEPKVKETEP SRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLA SVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRG ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHG LFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAI INPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI ENPNSMLL

Transcript Sequence

Transcript ID	Os02t0105200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:287571:293885:1 gene:Os02g0105200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12). (Os02t0105200-01)
Sequence	AAGACAAGTCGCGACCTGACGACCCGACCTTCCTCTTCTCTCCCGCTGCCCTCCGCCGCC GACCCGCAGGGGATCGTGGGGACGATCGATCGAGGAGGAGAGACCCAAACCCTAGCCACC CAGGCGCCACTCCCATTGCCCCCTTCGCCAGCCAGCCATGTCTGCGGCGCACCTCCTCCG CCACTCCCGCAAGCTGCGGACTCTACGTGATGCTCTAGATTATGATCGGTCTGCTCTTGT ACGCTACTTCTCCGCTGCTTCTGCATCCTTTCCCACAAAGGGAGGTGCTGCTGCTGGTGT TGAGAAAAGAATTGGTGGCGCCAGATTCCCTCAGTGCAAGCAGCCTGGGAAAGAGCTTGA GACCTTCAAGGTGTCACTAGGAGGACTAAATGGAAGATATGCTTGTAGAAGAGCACCTAA CAATTGTATCCCAACCACTATTACCGGTCTCAACGGTTCATTGTCATGTGGACAGGTGTC TTCAGCAAGATCTTTCTCAAGCAGTGCAGACCTGCCACCACATCAGGAAATTGGGATGCC ATCACTCTCTCCTACAATGACTGAGGGGAACATTGCAAGGTGGCTGAAGAAGGAAGGAGA TAAGGTCTCACCTGGTGAAGTTCTCTGTGAGGTGGAGACGGATAAAGCCACTGTAGAGAT GGAGTGCATGGAAGAGGGCTATCTCGCTAAGATCATTCATGGAGATGGTGCCAAAGAGAT CAAAGTTGGTGAGATCATTGCTGTAACTGTGGAAGAAGAGGGTGACCTTGAGAAGTTTAA GGATTATAAACCTTCAACTTCAGCTGCACCTGCAGCCCCTTCTGAACCGAAGGCTCAGCC TGAGCCTGCAGAGCCAAAGGTGAAGGAGACAGAGCCTTCCAGGACTCCTGAGCCGAAAGC CCCAAAGACTGAAGAAGCTTCTCAACCAGGGGGTCGAATATTCTCCAGCCCTCTTGCAAG AAAATTGGCAGAAGATAACAATGTTCCACTGTCAAGCGTAATGGGAACTGGTCCTGATGG GCGAATTTTGAAGGCGGACATTGAAGATTACTTGGCTTCTGTAGCAAAGGGTGGCAAAAG GGAAGCTCTTGCGGCTCCAGGGTTAAGTTACACTGATGTTCCTAATACTCAGATAAGAAA GGTTACTGCAAACCGCCTGCTAAGCTCTAAACAAACTATTCCTCATTATTACTTGACAGT TGACGCCCGTGTTGATAATCTTATCAAGTTGCGAGGGGAACTGAATCCGTTGCAAGAGTC ATCTGGCGGTAAGAAGATATCTATTAACGATCTTGTTATAAAGGCTGCAGCTCTGGCTCT TCGAAAGGTCCCTCAGTGTAATAGCTCGTGGATGAGTGATTTTATCCGCCAATACCACAA CGTGAACATCAATGTTGCTGTACAGACTGAGCATGGGTTGTTTGTTCCAGTAATTAGGGA TGCAGACAAGAAGGGACTTGGTACAATTGCTGAGGAGGTGAAGCAGGTGGCTCAAAGAGC AAGGGATAACAGCTTAAAACCTGAAGATTATGAGGGAGGCACATTCACCATATCAAACCT AGGAGGTCCTTTCGGAATCAAACAATTCTGTGCCATCATAAATCCTCCTCAGTCAGCAAT CTTGGCCATTGGTACTGCTGAGAAGAGGGTGATACCTGGCAGCGTAGACGGCCAGTATGA GTTTGGTTCCTTCATGTCGGCAACAATGAGCTGTGATCACAGGGTTATTGATGGTGCTAT CGGCGCAGAATTTCTGAAAGCATTCAAGGGCTATATCGAGAATCCAAACTCAATGTTACT GTGAAGTTAAAGATCAGCAAAACTATTCTTCTCATGTGCTCGAATAACGCAGAGTGGTGC TATCTCATTTTGTATAATACCGGCACGGTGTTCTGTCAAGGAGGACCCGAAAACCAAGAG CACATAACCATAGACAGAATGACCTGGTTTTTGGATTAAAAGCTTTTTCTGTTTATCTTT TTTTTTTTTGTTTGTTTGTTTCGTTCCAGTTATAGTGGGAATTAGGAGGATCAACTTACA AGCATTTTTAGCACCTTTTTGTGGGTTTACCCTCGGCAAGTGTGATAACTGGAGAGAGTA AATTCCCGGGAAACAATGCAGTATAGCCTGTATACGATTTGTCCCTTTTCTTTTTCCCCT TCATAGTGCAAAACCAAGAGGCGCAGAAGGATCTTTCGGAATAAATTGGCAATCTTGGGG AGT