Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0105100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:279365:286448:1 gene:Os02g0105100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec16, central conserved domain domain containing protein. (Os02t0105100-01);Hypothetical conserved gene. (Os02t0105100-02)
Sequence	ATGGCTGACCCCTTCGTCGCCGACGACCAGACCGACGCCGACTTCTTCGACAAGCTCGTC GACGACGACGACGACCTCTCCCCCGCCCCTGCCCCTGCCCCTGTTCCCGCCCAACAGTCG GCGGAGGCGGCCTTGCTTCCAGCTCTTTCCGACCTCAGCCTCGCCGACGATGACACAGAC CCTTCCCCGGCTCCTCCTCCCGTCGAGGCCCCGCCGGAGGGTGCCTCACCGGAGTCGGGG AAGGGCGCCGTCCACACAACGGTCAAGCAGGTCCAGTGGGCCTCATTTGGAGGCGCCGCC GACGATGGGGCTGATCCGTTCAGTGATCTGTCTGGAGGCGCCGCTGATGACGGATTTCTC GGGACCATGGCCGGGAACCAGAGCTTCCAGACCTCCGTCATTGGGAGCGTGGGGGCATCA GCTCACGGGATCTTTGGCGGGAGCCAGAGCTTGACTGCCGAGGTGACAGATCAGGATTTT TTCGGTGGTACCTCCGATCAGAACACCGATACCCAGCAGCAGCAGCTGGAGCAGAGCGGA AGCAGTGCTTTCGACTCCACAGATCCCAAGTATTTGGAGAGCATTTATCCTGGGTGGAAA TACGACGAGGCGACACAGCAGTGGTACCAAGTTGACAATTCTGATACGCACGGTAACGCC ACCCAGGTGGACACCAGCACTGAGAATATCCAGCAGCAGCAGCTTGCCGCTTCTTACATG CATAATCCGACACAGTCATCGCTAGAGACAATTGCGGAGGAGGGTACGACGACAGGGAGT GTATCGACATGGGGACAGGGTGGCACCTCGGAGTACCCACCAAACATGGTATTTTACGCC GAGTACCCAGGCTGGTACTTTGATACCAACACACAGCAGTGGCAATCGCTTGAGTCGTAC CAGCAGGCAGTGACAGCTAGTGCTGTTCAGGATGGAGCAAACAATGGTGTCGTTGCCTCT TCTGCTGAGACAAATTATAGCGTCAAACAAACCGAAGATCTTCCTGCCCACAATCAGGTG GCCCAACATAACTCTTTCTCTAATAACTATAGTTATCAGAGCCAGTGGCAGACAAATTCA TTTAGTAACTCTATGCAACCTGAAAGTGCAACAGCTAGTCTGCCAGATAGTTTCCAGAGC CTTGGTCAGCATGCTATTTCTGAATCTTTCAATTCCTCTACAAATAGTCAAGTTAGTTTT AACACCGCTGAAACCGCTACAAGCCATTATGGCAACGTGAACTTAGATTCGTCAAGTACT CAGGGTGGCTACACCGCAAGTGGTGGTCAACAAACTGGTTACAAGGGCTTCGAACCTTTC ACAGGTCATCAGGCTGGTTACAAGGGGTTTGAACCTTCTACAGGCCACCAGACAAGTCAT AAGTTATTTGATCCATCAGCAGGTAACCAAAACAGTTACAAGCCATTTGAACCTTCCACT GGTCACCACCAGCACAAGGGGTTTGAGCCTTCCACAAATCACCAGGGTGATTACAAGGCA TTTGAGCCATCCACACATAACCAGGGTGGTTACAAGGGATTCAGTCCTTCCACAGTTCAG CAGCCTGGTTACAAGGGATTTGAAGCTTCTACAGGCCTTCAAACTAATTTCAAGGGATTT GAACCTTACTCAGGTCAACAGGCTGGTTACACGGGATCCCTACCTTCTACAGGCCACCAG TCTAGTTACATGGGGTTTGAGACTTCTTCAAACCAGGGTTATGGTGATGCCAACAATGTT GCAAATAGTCAAGGCTTTGTTCCGATGGAGAGCATGTACGGAAGCCATAATCAAGCTCAT ACAAACCCCCAAGTGCCTTTGTCAAACAGTTATCTCAGTGTTGATAACTCCAAGAATTTC TCTCAGCAACAATTTCTTGGTCCAAATGCTTCACACTTGCAATTTGGGCAGTCCCCACAT GAAGAGAGGTCATCAGCTGGACGTCCACCACATGCTTTGGTTGCTTTTGGGTTTGGAGGC AAGCTTATACTTATGAAAGAAACCAACTCAATGGCCACAAACTATGACTCTGGGAATCAG GGGAATTCTAGTGGCACAGTATCAGTTCTTAATTTATCAGAGGTGGTCACGGACAAAGCT GATGCTTTAAGCGCCAGTAACGGTAGCGCACTTAGTTATTTCCATGCTTTATGTCGTCAA CCTGTTCCCGGCCCTCTTGTTGGGGGAAGCGCTGCATCAAAGGATGTGAACAAATGGCTT GATGACATGATTGCACTGTATGAATCATCGACTAGTGAATTCCAGAGGGGTGATCCTCGC AAGTTGCTTATTTCTTTGCTGAAGATACTATGCCACCACTATGGGAAACTGCGTTCACCT TTTGCTTCTGACCCATCACATGAGGACACAGACGGTCCAGAAATGGCAGTAACTAAGCTC TTTTCATCTTGTAAGAGAAGTAGCTTTCAAATGGGCGATTTCGGATCCCATGTCCGTTGC ATGAAGAATATTCCCTCTGAAAATCAGATGCAGGTGATTGCCATTTATATTATATGGATG TGA

Peptide Sequence

PEP ID	Os02t0105100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:279365:286448:1 gene:Os02g0105100 transcript:Os02t0105100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec16, central conserved domain domain containing protein. (Os02t0105100-01);Hypothetical conserved gene. (Os02t0105100-02)
Sequence	MADPFVADDQTDADFFDKLVDDDDDLSPAPAPAPVPAQQSAEAALLPALSDLSLADDDTD PSPAPPPVEAPPEGASPESGKGAVHTTVKQVQWASFGGAADDGADPFSDLSGGAADDGFL GTMAGNQSFQTSVIGSVGASAHGIFGGSQSLTAEVTDQDFFGGTSDQNTDTQQQQLEQSG SSAFDSTDPKYLESIYPGWKYDEATQQWYQVDNSDTHGNATQVDTSTENIQQQQLAASYM HNPTQSSLETIAEEGTTTGSVSTWGQGGTSEYPPNMVFYAEYPGWYFDTNTQQWQSLESY QQAVTASAVQDGANNGVVASSAETNYSVKQTEDLPAHNQVAQHNSFSNNYSYQSQWQTNS FSNSMQPESATASLPDSFQSLGQHAISESFNSSTNSQVSFNTAETATSHYGNVNLDSSST QGGYTASGGQQTGYKGFEPFTGHQAGYKGFEPSTGHQTSHKLFDPSAGNQNSYKPFEPST GHHQHKGFEPSTNHQGDYKAFEPSTHNQGGYKGFSPSTVQQPGYKGFEASTGLQTNFKGF EPYSGQQAGYTGSLPSTGHQSSYMGFETSSNQGYGDANNVANSQGFVPMESMYGSHNQAH TNPQVPLSNSYLSVDNSKNFSQQQFLGPNASHLQFGQSPHEERSSAGRPPHALVAFGFGG KLILMKETNSMATNYDSGNQGNSSGTVSVLNLSEVVTDKADALSASNGSALSYFHALCRQ PVPGPLVGGSAASKDVNKWLDDMIALYESSTSEFQRGDPRKLLISLLKILCHHYGKLRSP FASDPSHEDTDGPEMAVTKLFSSCKRSSFQMGDFGSHVRCMKNIPSENQMQVIAIYIIWM

Transcript Sequence

Transcript ID	Os02t0105100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:279365:286448:1 gene:Os02g0105100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec16, central conserved domain domain containing protein. (Os02t0105100-01);Hypothetical conserved gene. (Os02t0105100-02)
Sequence	GGATCTCCCCCGACAACAAAAGAAGAAGAAGAGAAAAGGATGGCGATGGCGATGCGACGT CGGGTGTCGTCGTGAGCGCAGCCCTCCCTCGCGATCCACCTACCCCGCCGCCGGTAAGCC TCCACCTCCGCCATTCCTCCCCCCACCCAAACCCTAGATCCACACCCTCCTCTCCGCCCC CGAGATCTCCTCGATCCCGTCCGCGATTCCACGCCGACATGGCTGACCCCTTCGTCGCCG ACGACCAGACCGACGCCGACTTCTTCGACAAGCTCGTCGACGACGACGACGACCTCTCCC CCGCCCCTGCCCCTGCCCCTGTTCCCGCCCAACAGTCGGCGGAGGCGGCCTTGCTTCCAG CTCTTTCCGACCTCAGCCTCGCCGACGATGACACAGACCCTTCCCCGGCTCCTCCTCCCG TCGAGGCCCCGCCGGAGGGTGCCTCACCGGAGTCGGGGAAGGGCGCCGTCCACACAACGG TCAAGCAGGTCCAGTGGGCCTCATTTGGAGGCGCCGCCGACGATGGGGCTGATCCGTTCA GTGATCTGTCTGGAGGCGCCGCTGATGACGGATTTCTCGGGACCATGGCCGGGAACCAGA GCTTCCAGACCTCCGTCATTGGGAGCGTGGGGGCATCAGCTCACGGGATCTTTGGCGGGA GCCAGAGCTTGACTGCCGAGGTGACAGATCAGGATTTTTTCGGTGGTACCTCCGATCAGA ACACCGATACCCAGCAGCAGCAGCTGGAGCAGAGCGGAAGCAGTGCTTTCGACTCCACAG ATCCCAAGTATTTGGAGAGCATTTATCCTGGGTGGAAATACGACGAGGCGACACAGCAGT GGTACCAAGTTGACAATTCTGATACGCACGGTAACGCCACCCAGGTGGACACCAGCACTG AGAATATCCAGCAGCAGCAGCTTGCCGCTTCTTACATGCATAATCCGACACAGTCATCGC TAGAGACAATTGCGGAGGAGGGTACGACGACAGGGAGTGTATCGACATGGGGACAGGGTG GCACCTCGGAGTACCCACCAAACATGGTATTTTACGCCGAGTACCCAGGCTGGTACTTTG ATACCAACACACAGCAGTGGCAATCGCTTGAGTCGTACCAGCAGGCAGTGACAGCTAGTG CTGTTCAGGATGGAGCAAACAATGGTGTCGTTGCCTCTTCTGCTGAGACAAATTATAGCG TCAAACAAACCGAAGATCTTCCTGCCCACAATCAGGTGGCCCAACATAACTCTTTCTCTA ATAACTATAGTTATCAGAGCCAGTGGCAGACAAATTCATTTAGTAACTCTATGCAACCTG AAAGTGCAACAGCTAGTCTGCCAGATAGTTTCCAGAGCCTTGGTCAGCATGCTATTTCTG AATCTTTCAATTCCTCTACAAATAGTCAAGTTAGTTTTAACACCGCTGAAACCGCTACAA GCCATTATGGCAACGTGAACTTAGATTCGTCAAGTACTCAGGGTGGCTACACCGCAAGTG GTGGTCAACAAACTGGTTACAAGGGCTTCGAACCTTTCACAGGTCATCAGGCTGGTTACA AGGGGTTTGAACCTTCTACAGGCCACCAGACAAGTCATAAGTTATTTGATCCATCAGCAG GTAACCAAAACAGTTACAAGCCATTTGAACCTTCCACTGGTCACCACCAGCACAAGGGGT TTGAGCCTTCCACAAATCACCAGGGTGATTACAAGGCATTTGAGCCATCCACACATAACC AGGGTGGTTACAAGGGATTCAGTCCTTCCACAGTTCAGCAGCCTGGTTACAAGGGATTTG AAGCTTCTACAGGCCTTCAAACTAATTTCAAGGGATTTGAACCTTACTCAGGTCAACAGG CTGGTTACACGGGATCCCTACCTTCTACAGGCCACCAGTCTAGTTACATGGGGTTTGAGA CTTCTTCAAACCAGGGTTATGGTGATGCCAACAATGTTGCAAATAGTCAAGGCTTTGTTC CGATGGAGAGCATGTACGGAAGCCATAATCAAGCTCATACAAACCCCCAAGTGCCTTTGT CAAACAGTTATCTCAGTGTTGATAACTCCAAGAATTTCTCTCAGCAACAATTTCTTGGTC CAAATGCTTCACACTTGCAATTTGGGCAGTCCCCACATGAAGAGAGGTCATCAGCTGGAC GTCCACCACATGCTTTGGTTGCTTTTGGGTTTGGAGGCAAGCTTATACTTATGAAAGAAA CCAACTCAATGGCCACAAACTATGACTCTGGGAATCAGGGGAATTCTAGTGGCACAGTAT CAGTTCTTAATTTATCAGAGGTGGTCACGGACAAAGCTGATGCTTTAAGCGCCAGTAACG GTAGCGCACTTAGTTATTTCCATGCTTTATGTCGTCAACCTGTTCCCGGCCCTCTTGTTG GGGGAAGCGCTGCATCAAAGGATGTGAACAAATGGCTTGATGACATGATTGCACTGTATG AATCATCGACTAGTGAATTCCAGAGGGGTGATCCTCGCAAGTTGCTTATTTCTTTGCTGA AGATACTATGCCACCACTATGGGAAACTGCGTTCACCTTTTGCTTCTGACCCATCACATG AGGACACAGACGGTCCAGAAATGGCAGTAACTAAGCTCTTTTCATCTTGTAAGAGAAGTA GCTTTCAAATGGGCGATTTCGGATCCCATGTCCGTTGCATGAAGAATATTCCCTCTGAAA ATCAGATGCAGGTGATTGCCATTTATATTATATGGATGTGAAATTTAGCTAAATCCTAAA TGTCCCCAGTTGAGGCAGCTACTTTGCTTGTAGGCTGTTGCACAAGAGGTCCAAAATCTT CTAGTTTCTGGGAGAAGAAAAGAGGCCCTTCAGTGTGCCCAAGAAGGTCAACTGTGGGGG CCTGCAATTATACTTGCTTTGCAACTTGGTGATAAGTTTTACGTCGATACTGTGAAGAAA ATGGCCCACTGCCATTTTCTATCTGGGTCACCTTTGCGAACATTGTGCCTTCTCATTGCT GGACAACCTGCAGATGTTTTTAATGCAGACAACAACATCAGTAGCAATTATGGTTCTCAA CAGCCTATGGAGCCTAGTCCTAATGGCATGTTGGATGACTGGGAGGAGAATTTGGCTATC ATAACTGCAAATAGGACAAAAGGTGACGACCTAGTTATTACCCATCTTGGAGATTGCCTT TGGAAAGAGAAAAATGAGGTTGCAGCTGCTCATTCGTGCTATTTAGTTGCTGAGTTAAAT ATTGACCCTTACTCTGAAAGTGCAAGGTTATGTCTCCTTGGTGCAGACCACCTTAAGTGC CCTCGAACTTTTGCCAGCCCTGAAGCCATTCAGAGGACAGAGATTTATGAATATGCGAAG GTGCTTGGTAATTCTCAATATATCCTGCTACCCTTTCAGCCATATAAGCTGATATATGCA TACATGCTTGCGGAAGTGGGAAGGGTTGCTGATTCTTTGAGGTACTGTCAAGCATCTATG AAGGTGCTGAAAGCCTCTGGCCGTGCCCCAGAATTGGAAGCATGGAAGCAATTATTTTCC ACCCTGGAGGACAGGATACGCACTCACCAGCAGGGTGGATATGGCACAAACCTTGCCCCT GCAAAATTAGTTGGAAAGATTTTCACCTCACTCGATAAATCTATATCGCGCATGATGGGT ACACCTTCTGCTCCACTTCCGCCATTGCCACAGGGTGCTGTTAGTGATAGGGAGAGTTAC ACTGCACCTGGGGCTACAAAGTTTGCAAATAGCCAATCAGTAATGACCATGTCATCGTTA ATGCCATCTGCATCAGTGCAGTCTATGAGTGAGATGTCAGATAGTGGCAGGAAGATTGCA CACAACAGAAGTGTTTCTGAACCGGACTTCGGCAGAACCCCGAAACAGGGTGCTGGATCG GACAGCACACAGAGTACTGCTCCAGGATCTGGTAGTTCACGCTTTGGTTGGTTAGGCTCC ACACTACAGAAGACAATGGGATTTGTTTCAAAATCCCACCGGCAGGCTAAATTAGGGCAA CAAAACAAGTTTTACTATGACGAAAAGCTAAAGCGATGGGTGGAGGAAGGTGCTGAGATT CCTGCCGAGGAGCCTCCTCTCCCTCCACCTCCATCAAAACCCTCATTCCAGAATGGTGTG GTAGACTATAAATTAAATGGCCCCATGAGTGCAAGTCATACTCCCAATGGATTCATGGAA GGGAAATCTTCAACTTCTTCAGAGCATGGTTCGGGAATGCCACCAATTCCGCCAAGCCAG AACCAGTTTTCTGCCCGTGGACGGATGGGTGTCCGGTCCAGATATGTGGACACATTCAAC AAGGGTGGAGGAGGAGGAGCAGTCCCATCCTATAACAAGCCAGCTGTTGCATCTGTGACA CCACCCAGTGGTGCCAAATTCTTTGTGCCCACTGCGGCTGTTGTTGCTGCAGAGCAGATG CCTAACCAAACAGCGGAAACACATGGTGAAACCTTCCGTCCAGATGAGCGTTCATCCCCA GCTGAAACGTCATTTTCTTCACCCCCACCAGCAACACAATTTTCAGCACCACTGATGGTG CCTACCATTCAGCGGTATCCGAGCATGGATAACATCACTACCCCGAACAATGGATCCGGA TTATCATCGGGAAGTAACAGCAGCTCATTCTCAAGATCACGAGCAGCATCGTGGAGTGGA ACTTACTCTGAACAAATTAATGCTGTGGCAGGTGCTAGATCTCCTGACCAGCAGACCATG CCATCGCCCCTCATGCCTGGGAAGCAGTCACATAGTCGTTCCAACAGCAACTCATCTGTT CAGTTCAACAGTTTGACAGAGGATCTTCATGAGGTTGAGCTCTGATATGCTGCGACTGCT CAGTATGACCCATGATTTTATAGAAACAACCTGGGTAAAATACCTTGATCCTCTCAGCAA ACCCCCTAGAGGAGGGAGGGAGGGAGGGAGGGAAAAAGAGAGGAAATGTTTTACAGTAAA TGAAGGGAATGCCACAAGTGAAATGGATATCTCCTGTCTTGCACAAAGTTGTGGGATGGG GAAGTAAAGCAAGGTGTGCCCGCCCTGTACTCGTACAAACAGTTGTTTTTTTGGGAGATT TTGTAGGTATTGTTGGTTATTATGGGTTTAGAGAAGGGGATAAAGAGTCGGATGTCCTTT TTTACATGTGAGAAGCAGAGAGCATGTGGACACCATTGTACAGATAATCCACCCCAGCCC AGCCCCAGCCCTGCCCCCATATTATAATTCATTGAAGACGCAGAGAATTGGGAATTCATC CGCCCCACATCCTTTTTTGTCATTGTATTATTATCATTTTTTTTCTTCATAATTTTGGAG AAGGATAGAAGAGAGGGAGAGGTCAAGATGTGTCTGGATATTCTAGTGTAAGAAAGAAGA AAGCTTTTGACTGCGTAGAGTGTTGTTATACTTACTGTAATGTTCCTATACCATGATGAT GATAATATTATTCTTTGGAGTCGACCGATGGATCAATC