Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0104200-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:205458:207444:1 gene:Os02g0104200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 60 description:Conserved hypothetical protein. (Os02t0104200-01);Conserved hypothetical protein. (Os02t0104200-02)
Sequence

ATGGAAAAGGCCGCGGCCAATCAGGCGGGCAAAGTCTTGAAGAAAGGTAAGAAGAAACAA
GCCAAGGATGAATTAGATCGCCAGAAGCAGGCTGAGAAGAAGAGACGGCGGCTGGAGAAA
GCGCTTGCAAACTCCGCTGCCATTATATCTGAGCTGGAAAAGAAGAAGCAGAAGAAGAGG
GAAGAACAGCAAAGGCTGGATGAGGAAGGTGCTGCGATAGCTGAAGCAGTTGCTCTTCAT
GTCCTCATTGGTGAGGACTCCGATGAACCCTGCCATTTGATGCTAAACAAGCACAGAAGA
TGCAACCATTGGGATCACTCAGCTGGTTTTGATTTCGCCGTGGATGCACAAGGCGCTGAT
ATTTATCCTCCTGATGGACTGATACAGTGCGCTGATCATGTTTATGCTCCCAAAGGGAGG
TGTATTGATTGGGGGATTGGCCAGCCATTGCCATCTTGGGGAGAGGTGAAGGACTTGCAG
TTGCAGGCACCGTGCTACCAAGGAATGTTCCACCAGTCAGTTGCATGCCCAGGTTTCATA
GCAGCTCAAGCGGTCTCCTCCTTGCAAATCGGAGGAGATTCGTCAGATATTACCTCTCCA
AGCCAAGGAGCGACTGTCGTTAATAGGATGCTTGGTGCCACCAACAGGCTCAACCTTTAC
AGAGAGATATAA

Peptide Sequence

PEP ID

Os02t0104200-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:205458:207444:1 gene:Os02g0104200 transcript:Os02t0104200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 60 description:Conserved hypothetical protein. (Os02t0104200-01);Conserved hypothetical protein. (Os02t0104200-02)
Sequence

MEKAAANQAGKVLKKGKKKQAKDELDRQKQAEKKRRRLEKALANSAAIISELEKKKQKKR
EEQQRLDEEGAAIAEAVALHVLIGEDSDEPCHLMLNKHRRCNHWDHSAGFDFAVDAQGAD
IYPPDGLIQCADHVYAPKGRCIDWGIGQPLPSWGEVKDLQLQAPCYQGMFHQSVACPGFI
AAQAVSSLQIGGDSSDITSPSQGATVVNRMLGATNRLNLYREI

Transcript Sequence

Transcript ID

Os02t0104200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:205458:207444:1 gene:Os02g0104200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 60 description:Conserved hypothetical protein. (Os02t0104200-01);Conserved hypothetical protein. (Os02t0104200-02)
Sequence

AAATCGAATCGATCGGAATTTGCTTCTCCGTTGAGGCGAGGCGAGGGCGAAGGGGGAACG
AAGTGGAAGGAGATTTGGATTGATTGGTTGGACGCCGGCGGCGCAGATCCCCAATTCGAT
CTCCTCCTCTTCGATCTTCATCCTACCCTGCCTGCCAGTGCCAGTATAAGATTCTTATGA
GCTGGTCGGCTGTGGTTTTCCCTCAATTCTGGTGCTACTAAGATGGGTCAGGAGCTCACC
ACAAACAAGCCTCTCACAACCCTCTTACCAACGGATGAAATAGCAACCGCCTACCATTTC
TCCCTCCTCCTCTCACCTGTCGTCTCCTTTTGGGACTGCATCTTCCGCAAGATAAGATAC
TCATTCAGACCTGAGTGGGTGTAGCATCCTGCACTGCCTGTTTCTTTTTAGCGCTAGCCA
GTGCTTTGCTTTCTGGCCTGGATCACTCCAAACAATGAACTTTGAAGCTTTTGCTTTCCC
GTAATTACAATTACAGTCACTAGTGGAGTTTAGCTGAAAATAGTACATAGTTGTCATGGA
AAAGGCCGCGGCCAATCAGGCGGGCAAAGTCTTGAAGAAAGGTAAGAAGAAACAAGCCAA
GGATGAATTAGATCGCCAGAAGCAGGCTGAGAAGAAGAGACGGCGGCTGGAGAAAGCGCT
TGCAAACTCCGCTGCCATTATATCTGAGCTGGAAAAGAAGAAGCAGAAGAAGAGGGAAGA
ACAGCAAAGGCTGGATGAGGAAGGTGCTGCGATAGCTGAAGCAGTTGCTCTTCATGTCCT
CATTGGTGAGGACTCCGATGAACCCTGCCATTTGATGCTAAACAAGCACAGAAGATGCAA
CCATTGGGATCACTCAGCTGGTTTTGATTTCGCCGTGGATGCACAAGGCGCTGATATTTA
TCCTCCTGATGGACTGATACAGTGCGCTGATCATGTTTATGCTCCCAAAGGGAGGTGTAT
TGATTGGGGGATTGGCCAGCCATTGCCATCTTGGGGAGAGGTGAAGGACTTGCAGTTGCA
GGCACCGTGCTACCAAGGAATGTTCCACCAGTCAGTTGCATGCCCAGGTTTCATAGCAGC
TCAAGCGGTCTCCTCCTTGCAAATCGGAGGAGATTCGTCAGATATTACCTCTCCAAGCCA
AGGAGCGACTGTCGTTAATAGGATGCTTGGTGCCACCAACAGGCTCAACCTTTACAGAGA
GATATAAAAACATACACTTCACGATATTATTATTGTATATAGTCATCAAACTTGTGTTGA
CTACTTTGCCTGCAGTATATCTCATAACCAAAGAAGAATTGGATAGAACACCTTGTTTAC
TGTTTCTGTGAGTCTAAAAGGATATCTTATATCAGTCAAATTGGTATTGTAATGAACATA
TTGTTTTGATTCCCTGTTGATTTTCTTGGAATGTATCCTGTGTCGACTTG