Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0102900-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:158662:163728:1 gene:Os02g0102900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chaperonin 60 beta subunit 2, chaperonin 62.5K beta-chain description:Similar to RuBisCO subunit binding-protein beta subunit, chloroplast (60 kDa chaperonin beta subunit) (CPN-60 beta) (Fragment). (Os02t0102900-01)
Sequence	ATGGCCTCAGCATTCGGGAGCACCTCAGCATGTGGCATCAAGATCACTCCTACCGCTTTT GCCACCAAGAAACATCTTTGCCTGGTTCCACCCCCAGTCGTTTCACTTCCCCGGAAAAAT AGGCCTCAGAGGAAGTGTAATTTCAGAGTAAATGCTGCCAAAGAGTTATATTTCAACAAG GATGGGTTGGCTATCAAGAAGCTGCAAAATGGAGTCAATAAGCTTGCTGATCTCGTTGGA GTCACCCTTGGTCCAAAAGGACGGAATGTTGTCCTTGAGAGCAAGTATGGATCACCTAAA ATTGTCAATGATGGTGTTACCGTTGCAAAGGAGGTTGAGCTGGAGGACCCTGTTGAAAAT ATTGGAGCCAAATTAGTCCGGCAAGCTGCAGCCAAGACAAATGATTTGGCTGGTGATGGG ACAACGACTTCTGTTGTCCTTGCTCAAGGGATGATCACAGAGGGTGTTAAGGTTGTGGCT GCTGGTGCTAATCCAGTACAGATTACCCGTGGTATAGAGAAAACGGCCAAAGCACTTGTG AGTGAACTCCAAAAAATGTCCAAGGAGGTTGAAGACAGCGAACTTGCTGATGTTGCTGCG GTAAGTGCTGGAAATAACTACGAAATTGGCAACATGATAGCTGAAGCTATGAACAAGGTT GGACGACAGGGGGTGGTCACACTTGAAGAAGGAAAGAGTGCTGAAAATAATCTCTATGTT GTTGAGGGAATGCAATTTGATCGCGGCTATATTTCTCCCTACTTTGTAACTGACAGTGAA AAAATGTCAGTGGAGTATGAGAATTGCAAGTTGCTCCTTGTGGACAAGAAAATCAACAAT GCCAGAGATCTTATAACAATTCTGGAGGATGCTATTAGGGGTGGGTACCCAATCCTAATA GTTACGGAGGATATTGAGCAGGAAGCTCTTGCAACTCTTGTGGTCAACAGGCTTAGGGGT GCATTGAAGATTGCTGCTATTAAAGCTCCTGGTTTTGGAGAACGCAAGAGTCAATACCTT GATGATATTGCTACTCTTACTGGAGGTACTGTCATCAGGGAAGAAGTTGGCTTGTCCCTA GACAAAGCTGATAGAGATGTTCTAGGAACGGCCGCCAAGGTTGTAGTTACCAAGGATTCA ACAACAATAGTTGGGGATGGTACTACCCAGGACGAAGTAAACAAAAGGGTGACACAAATC AAGAACCAGATTGAGGTTGCTGAACAGGAATATGAGAAAGAAAAACTGAATGAGAGAATA GCTAAGCTCTCTGGTGGTGTTGCTGTCATCCAGGTAGGAGCACAGACAGAAACTGAGCTT AAGGAAAAGAAACTGAGGGTTGAAGATGCACTGAATGCAACCAAGGCGGCTGTTGAGGAA GGTATTGTTGTTGGAGGTGGCTGTACGCTTTTGCGGCTTGCATCAAAAGTTGATGCCATT ATAGAAACACTTGAGAATGATGAACAGAAGGTTGGGGCTGAAATCGTAAGGAAGTCCTTG AGTTACCCACTTAAATTAATAGCAAAAAATGCTGGTGTTAACGGCAGTGTTGTTACTGAG AAGGTCCTTGCCAATGATAACTTCAGGTATGGTTACAATGCCGCTACAGGAAAATATGAG GATTTGATGGCTGCTGGTATTATTGATCCCACCAAGGTGGTGAGATGTTGCTTGGAGCAT GCTGCGTCGGTGGCGAAAACATTCATCACATCAGATGCTGTTGTGGTGGACATCAAGGAG CCTGAGAAAGCAGCTGCTGCTGGGAACCCAATGGGTGGATCAGGTTTTGGATTTTAG

Peptide Sequence

PEP ID	Os02t0102900-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:158662:163728:1 gene:Os02g0102900 transcript:Os02t0102900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chaperonin 60 beta subunit 2, chaperonin 62.5K beta-chain description:Similar to RuBisCO subunit binding-protein beta subunit, chloroplast (60 kDa chaperonin beta subunit) (CPN-60 beta) (Fragment). (Os02t0102900-01)
Sequence	MASAFGSTSACGIKITPTAFATKKHLCLVPPPVVSLPRKNRPQRKCNFRVNAAKELYFNK DGLAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVEN IGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALV SELQKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMNKVGRQGVVTLEEGKSAENNLYV VEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKINNARDLITILEDAIRGGYPILI VTEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIREEVGLSL DKADRDVLGTAAKVVVTKDSTTIVGDGTTQDEVNKRVTQIKNQIEVAEQEYEKEKLNERI AKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAI IETLENDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRYGYNAATGKYE DLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKEPEKAAAAGNPMGGSGFGF

Transcript Sequence

Transcript ID	Os02t0102900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:158662:163728:1 gene:Os02g0102900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chaperonin 60 beta subunit 2, chaperonin 62.5K beta-chain description:Similar to RuBisCO subunit binding-protein beta subunit, chloroplast (60 kDa chaperonin beta subunit) (CPN-60 beta) (Fragment). (Os02t0102900-01)
Sequence	ATTGATTGAGCAGCCGGCGGCGGCGATCTTTGCTTAAACCCTAATCTCAGACGCTGCCTT TGAGAGAGGAGAGGGGGGAGATCTTCTTCTTCGCTTACGGCGGGTGCAGACAATATGGCC TCAGCATTCGGGAGCACCTCAGCATGTGGCATCAAGATCACTCCTACCGCTTTTGCCACC AAGAAACATCTTTGCCTGGTTCCACCCCCAGTCGTTTCACTTCCCCGGAAAAATAGGCCT CAGAGGAAGTGTAATTTCAGAGTAAATGCTGCCAAAGAGTTATATTTCAACAAGGATGGG TTGGCTATCAAGAAGCTGCAAAATGGAGTCAATAAGCTTGCTGATCTCGTTGGAGTCACC CTTGGTCCAAAAGGACGGAATGTTGTCCTTGAGAGCAAGTATGGATCACCTAAAATTGTC AATGATGGTGTTACCGTTGCAAAGGAGGTTGAGCTGGAGGACCCTGTTGAAAATATTGGA GCCAAATTAGTCCGGCAAGCTGCAGCCAAGACAAATGATTTGGCTGGTGATGGGACAACG ACTTCTGTTGTCCTTGCTCAAGGGATGATCACAGAGGGTGTTAAGGTTGTGGCTGCTGGT GCTAATCCAGTACAGATTACCCGTGGTATAGAGAAAACGGCCAAAGCACTTGTGAGTGAA CTCCAAAAAATGTCCAAGGAGGTTGAAGACAGCGAACTTGCTGATGTTGCTGCGGTAAGT GCTGGAAATAACTACGAAATTGGCAACATGATAGCTGAAGCTATGAACAAGGTTGGACGA CAGGGGGTGGTCACACTTGAAGAAGGAAAGAGTGCTGAAAATAATCTCTATGTTGTTGAG GGAATGCAATTTGATCGCGGCTATATTTCTCCCTACTTTGTAACTGACAGTGAAAAAATG TCAGTGGAGTATGAGAATTGCAAGTTGCTCCTTGTGGACAAGAAAATCAACAATGCCAGA GATCTTATAACAATTCTGGAGGATGCTATTAGGGGTGGGTACCCAATCCTAATAGTTACG GAGGATATTGAGCAGGAAGCTCTTGCAACTCTTGTGGTCAACAGGCTTAGGGGTGCATTG AAGATTGCTGCTATTAAAGCTCCTGGTTTTGGAGAACGCAAGAGTCAATACCTTGATGAT ATTGCTACTCTTACTGGAGGTACTGTCATCAGGGAAGAAGTTGGCTTGTCCCTAGACAAA GCTGATAGAGATGTTCTAGGAACGGCCGCCAAGGTTGTAGTTACCAAGGATTCAACAACA ATAGTTGGGGATGGTACTACCCAGGACGAAGTAAACAAAAGGGTGACACAAATCAAGAAC CAGATTGAGGTTGCTGAACAGGAATATGAGAAAGAAAAACTGAATGAGAGAATAGCTAAG CTCTCTGGTGGTGTTGCTGTCATCCAGGTAGGAGCACAGACAGAAACTGAGCTTAAGGAA AAGAAACTGAGGGTTGAAGATGCACTGAATGCAACCAAGGCGGCTGTTGAGGAAGGTATT GTTGTTGGAGGTGGCTGTACGCTTTTGCGGCTTGCATCAAAAGTTGATGCCATTATAGAA ACACTTGAGAATGATGAACAGAAGGTTGGGGCTGAAATCGTAAGGAAGTCCTTGAGTTAC CCACTTAAATTAATAGCAAAAAATGCTGGTGTTAACGGCAGTGTTGTTACTGAGAAGGTC CTTGCCAATGATAACTTCAGGTATGGTTACAATGCCGCTACAGGAAAATATGAGGATTTG ATGGCTGCTGGTATTATTGATCCCACCAAGGTGGTGAGATGTTGCTTGGAGCATGCTGCG TCGGTGGCGAAAACATTCATCACATCAGATGCTGTTGTGGTGGACATCAAGGAGCCTGAG AAAGCAGCTGCTGCTGGGAACCCAATGGGTGGATCAGGTTTTGGATTTTAGTTTAGAAGA AGAGGAGTACCCTTTTTGGCAGTTGGCAACCATTTTTACACTGGAGGCAGGCAGAATTTC ACAGTTGCATCTGAGACGTTTTTTCTTTTCCTGTGTGTAATTGTTGCGTACGTCAATGTG GCAGATGAGAGGAGTAGTAGGTTATGAATGGCCAGCATTATGACAGTTTATTGTTGCTCG ACCTTACAGAAGAGCTGAAACAGTGCAACATAATGTTTTTAAGGTTGAGAATTATGCAAG CTGAAGTAGTTGGTAATAACCGGGAGAGGATTGTGTTGTCGTTGGAGTAGATGATGATTT TACTAGCTAGTTAGATCGAGTTACAAACATATAATTAATTAATTAAGGGGGCATTGGCAG ATTACAATAATAAATAAATTATTTACATG