Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0102600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:132984:135144:1 gene:Os02g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os02t0102600-01)
Sequence

ATGGTGCAATTCCGCAGCTCTCTCAGCATGAGCCGGGCACGGACCCGCCACGGCGATGGC
GACGACCGCGGCTGGAACCAGCTCCACGTCGCCTCCCGCAAGGGCGACCTCAACCAGGTG
AGGCGTCTCCTGGATGATGGCATGGATGTCAATGCACCTGCATGGGGGCCAAAATCACCT
GGCGCTACCCCCCTGCATTTGGCTGCTCAGGGTGGACATGTTAAAATCATGGACGAGCTA
CTGGAGCGGGGTGCAAATATTGATGCTCGCACAAAAGGAGCTTGTGGATGGACCCCTCTA
CATATTGCTGCTAAGGAAAGGAACAAAAGAGCTGTCAGGTTTCTGATTGAGAATGGTGCA
TTCTTGCCACCTGACATGAATGACCACAGGTTCAATCCTCCTCTCCATTACTGCTCTGGA
TTGGAATGGGCATATGAGATGAAGCGCATGCAAGACGAAAGTGATTCGACCGGTGAAACT
TCTCTGGGCTCGGAGAGCTAG

Peptide Sequence

PEP ID

Os02t0102600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:132984:135144:1 gene:Os02g0102600 transcript:Os02t0102600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os02t0102600-01)
Sequence

MVQFRSSLSMSRARTRHGDGDDRGWNQLHVASRKGDLNQVRRLLDDGMDVNAPAWGPKSP
GATPLHLAAQGGHVKIMDELLERGANIDARTKGACGWTPLHIAAKERNKRAVRFLIENGA
FLPPDMNDHRFNPPLHYCSGLEWAYEMKRMQDESDSTGETSLGSES

Transcript Sequence

Transcript ID

Os02t0102600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:132984:135144:1 gene:Os02g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os02t0102600-01)
Sequence

GGAAAGAGAAAGAGGATCGTCTCGGCTCGTCGTCTTCTAGCTAGGGTTCGTAAGTTCTAG
GGTTTGCGATGATCCCCAACTCCTCCTCCCTCTAGTATTTCGAGCGAATTCTCCAACACT
TTCACCCAGCCGCGCGCGAGAGGAGAAGGAAGATAGATAGATAGATCGCTCCGCACATAC
TATGGTGCTCACCCCATCGCCGTCTCCACCGCCGATGCTCCCCAAGAAGCTCCGCGCGCT
CGGTCCAGGCTTGAATCCCTTTGCTCCCTTCGGCATGGGTAACTACTATTCCTCCTCTCG
CTAATATATTTCTCCTCGCTCGATCCATCTTCCCCCACCTCCCCCCTTCTCAAACAATTA
ATCCCCTTCCCGATTCGATTCGATTCGGTTCGGTTCGCTTTCGGACTCGGTTTCAATTTC
GATTCTCCCTCCGTCGTCGCGGCCCTATTCTAGCCGCCCCCTCCCCTCCGCTCGATTGCC
TGCCTCCGGATGGTGCAATTCCGCAGCTCTCTCAGCATGAGCCGGGCACGGACCCGCCAC
GGCGATGGCGACGACCGCGGCTGGAACCAGCTCCACGTCGCCTCCCGCAAGGGCGACCTC
AACCAGGTGAGGCGTCTCCTGGATGATGGCATGGATGTCAATGCACCTGCATGGGGGCCA
AAATCACCTGGCGCTACCCCCCTGCATTTGGCTGCTCAGGGTGGACATGTTAAAATCATG
GACGAGCTACTGGAGCGGGGTGCAAATATTGATGCTCGCACAAAAGGAGCTTGTGGATGG
ACCCCTCTACATATTGCTGCTAAGGAAAGGAACAAAAGAGCTGTCAGGTTTCTGATTGAG
AATGGTGCATTCTTGCCACCTGACATGAATGACCACAGGTTCAATCCTCCTCTCCATTAC
TGCTCTGGATTGGAATGGGCATATGAGATGAAGCGCATGCAAGACGAAAGTGATTCGACC
GGTGAAACTTCTCTGGGCTCGGAGAGCTAGAGGAAAGCAATCTCCTCAGTCTGGCAAAGA
GGTCAATCTTGGATCAACAGAGTTTGTAAACATCAAGGGTCACGTTTACTTTGTGAAATT
GGAACGAATTACCATGTGAATCTTACATGCGACATGGTACTAGCATGCATTGCGATGTTG
TTGTGGGGTTACTTGTGTTTTCGATAATTGCATTGTGTTCTTACTACACTGGTAGCATGT
ATTCTACTACACATTCTTAATATCAGAATCAATATCCGGTTTGCGTCCTATGACAGTATG
C