Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0102400-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:127079:130126:-1 gene:Os02g0102400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S5 family protein. (Os02t0102400-01);Ribosomal protein S5 family protein. (Os02t0102400-02);Ribosomal protein S5 family protein. (Os02t0102400-03)
Sequence	ATGGCCTCCTCCGCCGCCGCCCGGTCCCGCGCCGCCGCCTCCGCCGCGTGGGCGCGCCTC CTCTCCCTGCGCCCCAGCCCTCCCGTATCCTCCACCCACCATCTAACCCTGCGGATCGCC TCCCCTCGCCGCCACTTCGCCTTCTCCGCCAACGCCTCCTCCGGCAGCTCTAGGCTCAAG CAGATCCAGAGCGAGCGGGTCATCCACGACCTCTTCGCCGAGCTCCAGCGAGAGCGCCAG CGGGACCGCCAGGAGGAGGATGAGGATGAGGGTGAGGATGAGGACTACCTGGGCGTCAAG CCGCTCATCGAGAAGCTCGAGCGCCGCAGGGCCAAGGAGGAGGCCGCGCCGGACGATTCC TTCTGGGAGCCCACCGACTCCGACAGTGACGAGGAGGACGAGCGCTACACCCCTGACGCC ATCAAGCGCCGCGTCGACGAGTTCGAGCGCAAGTGCAACCGCCACTCCGAACTCCTACGC TCCTTCGCCGAAGCCGAAACCCTTGACGATGCCCACAAATGGATGACCAAGATCGACAGA TTCGAGGAGCGCCATTTGAAGCTTCCACTGGAGTACAGAGTCATCGGCGACATGATGAAC CGCCTCAAAGATGCCACCGGCAAGGACCGCTTTCTTCTCCTCCAGAAGCTTAACCGAGCT GTTAGAATCATGGAATGCAGGGAAGCATACGATCCCAGCAACCCCTCCAATTTCGGGGTC ATCCAACACCAGCAGGTCGGCTCTCCGGAGGATCTTGTGCTCAATGCTGGCTTTGACAGG GAGAAGCAGATGATCCAAGGGGCTGGTGACGACGACGACGACGAGGAATTCAATGAAGAC AAGGAGAAGGATGATCTGCTCATAGAGAAGTTGAATTCTATCGAAAAGAAGATCGAGGAG AAATTAGCTGAGTTAGATCATACGTTTGGTAAGAAGGGCAGAGTTCTAGAGGAGGAAATT AAGGATCTTGTTGAAGAGCGCAACTCCCTCACGGAGCATAAGAGGAGACCTATGTACAGG AAAGGTTTTGACGTCAAGGTCATTGATGTTAATCGGACGTGTAAAGTCACAAAGGGAGGC CAAATAGCAAAATTCACAGCATTGTTAGCGACTGGAAACTACCATGGTGTTGTAGGATTT GCAAAAGCTAGAGGTCCGACAGCCAAGATTGCAATTCAAAGGGCTTATGAGAAATGCTTC CAGGACCTCCATTACATGGAGCGATATGAGGACCACACAATTGCTCATGCAATTCAGGCC AAATATGAGAAGACAAAGATATACCTCTGGCCTGGACCAATGAGAAGTGGAATGTCTGCT GCTGGTAGGACGGTTGAAACAGTACTGTATTTAGCTGGTTTCAGCAACGTCAAGTCAAAG ATTATTGGTTCAAGGAACCCCCTGAATGTTATCAAAGCTCTCTTCATAGCATTAAACGCC ATTGAAACGCCAAAGGATGTTGAGCAGAAGTTTGGGCGGACCGTGGTTGAGTCATACTTA TTGTAG

Peptide Sequence

PEP ID	Os02t0102400-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:127079:130126:-1 gene:Os02g0102400 transcript:Os02t0102400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S5 family protein. (Os02t0102400-01);Ribosomal protein S5 family protein. (Os02t0102400-02);Ribosomal protein S5 family protein. (Os02t0102400-03)
Sequence	MASSAAARSRAAASAAWARLLSLRPSPPVSSTHHLTLRIASPRRHFAFSANASSGSSRLK QIQSERVIHDLFAELQRERQRDRQEEDEDEGEDEDYLGVKPLIEKLERRRAKEEAAPDDS FWEPTDSDSDEEDERYTPDAIKRRVDEFERKCNRHSELLRSFAEAETLDDAHKWMTKIDR FEERHLKLPLEYRVIGDMMNRLKDATGKDRFLLLQKLNRAVRIMECREAYDPSNPSNFGV IQHQQVGSPEDLVLNAGFDREKQMIQGAGDDDDDEEFNEDKEKDDLLIEKLNSIEKKIEE KLAELDHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYRKGFDVKVIDVNRTCKVTKGG QIAKFTALLATGNYHGVVGFAKARGPTAKIAIQRAYEKCFQDLHYMERYEDHTIAHAIQA KYEKTKIYLWPGPMRSGMSAAGRTVETVLYLAGFSNVKSKIIGSRNPLNVIKALFIALNA IETPKDVEQKFGRTVVESYLL

Transcript Sequence

Transcript ID	Os02t0102400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:127079:130126:-1 gene:Os02g0102400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S5 family protein. (Os02t0102400-01);Ribosomal protein S5 family protein. (Os02t0102400-02);Ribosomal protein S5 family protein. (Os02t0102400-03)
Sequence	GGAGGTTCATGGCCTCCTCCGCCGCCGCCCGGTCCCGCGCCGCCGCCTCCGCCGCGTGGG CGCGCCTCCTCTCCCTGCGCCCCAGCCCTCCCGTATCCTCCACCCACCATCTAACCCTGC GGATCGCCTCCCCTCGCCGCCACTTCGCCTTCTCCGCCAACGCCTCCTCCGGCAGCTCTA GGCTCAAGCAGATCCAGAGCGAGCGGGTCATCCACGACCTCTTCGCCGAGCTCCAGCGAG AGCGCCAGCGGGACCGCCAGGAGGAGGATGAGGATGAGGGTGAGGATGAGGACTACCTGG GCGTCAAGCCGCTCATCGAGAAGCTCGAGCGCCGCAGGGCCAAGGAGGAGGCCGCGCCGG ACGATTCCTTCTGGGAGCCCACCGACTCCGACAGTGACGAGGAGGACGAGCGCTACACCC CTGACGCCATCAAGCGCCGCGTCGACGAGTTCGAGCGCAAGTGCAACCGCCACTCCGAAC TCCTACGCTCCTTCGCCGAAGCCGAAACCCTTGACGATGCCCACAAATGGATGACCAAGA TCGACAGATTCGAGGAGCGCCATTTGAAGCTTCCACTGGAGTACAGAGTCATCGGCGACA TGATGAACCGCCTCAAAGATGCCACCGGCAAGGACCGCTTTCTTCTCCTCCAGAAGCTTA ACCGAGCTGTTAGAATCATGGAATGCAGGGAAGCATACGATCCCAGCAACCCCTCCAATT TCGGGGTCATCCAACACCAGCAGGTCGGCTCTCCGGAGGATCTTGTGCTCAATGCTGGCT TTGACAGGGAGAAGCAGATGATCCAAGGGGCTGGTGACGACGACGACGACGAGGAATTCA ATGAAGACAAGGAGAAGGATGATCTGCTCATAGAGAAGTTGAATTCTATCGAAAAGAAGA TCGAGGAGAAATTAGCTGAGTTAGATCATACGTTTGGTAAGAAGGGCAGAGTTCTAGAGG AGGAAATTAAGGATCTTGTTGAAGAGCGCAACTCCCTCACGGAGCATAAGAGGAGACCTA TGTACAGGAAAGGTTTTGACGTCAAGGTCATTGATGTTAATCGGACGTGTAAAGTCACAA AGGGAGGCCAAATAGCAAAATTCACAGCATTGTTAGCGACTGGAAACTACCATGGTGTTG TAGGATTTGCAAAAGCTAGAGGTCCGACAGCCAAGATTGCAATTCAAAGGGCTTATGAGA AATGCTTCCAGGACCTCCATTACATGGAGCGATATGAGGACCACACAATTGCTCATGCAA TTCAGGCCAAATATGAGAAGACAAAGATATACCTCTGGCCTGGACCAATGAGAAGTGGAA TGTCTGCTGCTGGTAGGACGGTTGAAACAGTACTGTATTTAGCTGGTTTCAGCAACGTCA AGTCAAAGATTATTGGTTCAAGGAACCCCCTGAATGTTATCAAAGCTCTCTTCATAGCAT TAAACGCCATTGAAACGCCAAAGGATGTTGAGCAGAAGTTTGGGCGGACCGTGGTTGAGT CATACTTATTGTAGTCATCAATTTGTTTGTCCTGTGGAGCTCGCCATCTGGCTGTGGCGA TGGACGTCCAAAGAAAGAGCTAATTGCACATCTAACCGTGTGATGTGTGGTCTTCATTTG TTTGGATGTTGGTTTCTCTACACTTTGCCCTGCAACCGGCAGTCTGAGATGTGAGACTGT AATTTTTGAGGTGATCGATCAATCAATGCTTTAGTGCCAACGGCGCAGCACATAGCAGAT GGCAAGAGAAGCAAACGTTTGATTGATGATTCTTGCATAAGGTGGCCTGCCCCTTTGGTA TGAGTCGTTCGTTTGGATTTGTAACCAGAGGCTCTGCCTCACGCCTACTGTTATGGTGGA TTGGCAAACCGGCCACAATATGCTGATTTAGAGATAATAAAGTCCTTGAACATGTGTAGC TACTTGGTTGATTGATGTCATCCCGGAGATTTGCAGACGCATCGTGCATTGCATGCATGA TGATCAATTTTATTCAATTGGCTGCCT