Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0100200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:9298:13896:-1 gene:Os02g0100200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Steroid nuclear receptor, ligand-binding domain containing protein. (Os02t0100200-01)
Sequence	ATGAGGAAGCGCACTGCATCTGATCGCATTCGGGTCCCCTCCAGCAACCCCGCGCCATCG CCGTCGCCGCCGCCGCCGCCGCCGCCGCCGGAGGAACCTGCCGTGCCCATGCCGCATGTT GGGGCCCGCCGCTCCACGCGCGTCTTCGTGCCCAAGACGCCCAGGCCGCCTCAGCCTTCT GATCCTGCCAGGGTCCTCCGCTCCGGCAAGCGCCTCGCCTTCTCCGAATCCCCCGCCGAC GCCCACTGGTTCCAGTGCAAGCCCAACAACTGCTTCCACGTCCATGACCACCAACGCCAA CTTCACGACGACCCCAAGCCACCGCCGCCGCCTCTGCCGCGCACAAGGTCCTTCGGGATC GTCTACAGCAGGAAGCGCCGCCGCCGCCTCCCCGAACCCAAGGAGGACACCAGGTTTGCC ATTGTCTTCACTAGGAAGAGACCCAAGGTCGCCCCTTTTCAGCACCACGCCCCGAACGAC CTTGCCACCATCCCATGCTCCTCTTCCAGGGAGTTTGCCTCCAGGACTGGCTTCTTTGAT TCCCATTTCTTGACCCTGGTGGATTGTATTCCCACTAATAAAGCTGACGCTGCCATGCTT ATTGTCCTTGTGGATTCATCTTGCTCTGGGAGCTCTCAGCACTTCTTGCGCCTCCTCCTC TCTGTGCTGCGCTGGATGCGTAGCTGCCGACGGGGCAAGGTCCGAAACCTTGCCTCCTTT CTCTCGTCCGATGCTGTCGCCACTGCGCTTGCATTGCGGGGATTGCATTTTGTCCAGCTT CAATGCCGGAGAGACTGTGCATTGTCACAGAGGGCTTTGGTGCAATGTGGCTGGTGTGAG CTTCGTGGTGCCAAGGATTCTGAACCATTGTTGTCTGTCAATTTCTTGGCAGTCCCTTCT TACTTCCAGATTTTGCACTTGTTAATAGCACTCGAGTCAATGTATCTTCCAGCTGTGATT CGTACGAGAATGCATTTGGTTGGTGGAGCTGAAGAAATTTATCCTCGCACCCTATTGGAG GAGGATTCTGAATCTCTGAGCACTGGGGATACTGATCCTGCTGTTGACCTGTGTAGCAAC AAACTTTGCAGTGTGGCTCAAGATTATGTGCCCCTTGAAGAGATTGCAGGAGTGGTGGTC CATGGTCTGAGGCTAAAGAAGCATCAAAGGAAGAGAAGCTCTATGCGGCATCCCCTCAGT CGACAGCGTCTTGCTGCAAGATTTCCCGACAAGGTAGTTGCAACAAACCAGACCGATGTG GCTAGACAGACAGAAGCGGATGCGCCACCCTCAGTTAGTCCGGAGCTTCCACTGGAGCCT GTCAAACCTAAAGCAGCACTGGAAATCTCTCTTGATTTGCTTGAAAACATGGATGACAGT GATGTTTCAACTCCTATAGGATCAAATGGGAAGCAAAAGAGGTCTTCTTTGAAAAGTCCC ATTGAGCGCATGAATGAAAGGTTGGCTTTGGCTGAGGTTAGACAGAATATAGATTCTGTT CACTGCAGAGCAAACCTTTTAATTATTCAACCTGATAGGTGCTGGAGGGAAGAAGGCGCT GAAGTTATGCTGGAACCATCGGAATCAAATGAGTGGTGTATAGCTGTGAAGATACATGGT GTCAATAGAATATCTCTGAAGCCTTCGGAGCAGAGGTTTTATGTTGTTAACCGGTTCACC CATGCCTATATTTTGGCAGTTGATGATGGATTGAAGATTGAGTTCTCTGATAAATGGGAC TGGCTTTTGTTTAAGGAGTTGCAAATTGAGGGTCGGGAGCGCAATTCCCAGGGAAAGATG ATACCAATTCCTGGTGTAAATGAGGTTTCTGATGACATGGGAGTGATTGGAACATATCCT TTTTCACGCCCTGTGCCAGACTATATCAGAATGGCGGATGATGAGGTTGGGCGAGCTCTC TCAAGGGACTCTGTATATGATCTGGATTCTGAGGATGAACAGTGGCTCACCCAGTTGAAT CATTCAGATTCTGACAGAAAAAGCGCACATCTTAATCATATTTCTTATGAAGATTTTGAA AAGATGATTACCACGTTTGAAAAGGATGCTTTCAACAACCCTGAAGGAACTAGTGATTTG GATCAGATTCTTTCCAGATACCCTACTTTGGAAAAGGACCATAATGTCCTTGCTGTGCAT GAATATTGGATAAACAAGAGATATAAGAAAGGTGTACCACTGCTAAGGATATTGCAGGGT GCAACACTAAGACGAGGACAACTGTCACAAAGATCTATTAAGAAAAAAAGATCTTTCAAG AGACAAAGAAGCCAAGCTGGCCGTGGAAAGCCTGACATATGCTTGCAAGATGCTAATGGT GCTGAAGAGGAGGCTTTGCGGAGAGTTGTGGAAGCCGAACGTGCTGCAACACAGGCAGGA GAAACAGCTGTTCGTCTGCGCAGTAGAGCTCAGCGTCTCATGGCAAAGGCTGAGCTGGTG GCATACAAATCTATTATGGCCCTCAGGATTGCTGAGGCTGCTAGGATATCTGACTCGTCA CGGGATCTTGTTTTGACGACCCTCGACTAG

Peptide Sequence

PEP ID	Os02t0100200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:9298:13896:-1 gene:Os02g0100200 transcript:Os02t0100200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Steroid nuclear receptor, ligand-binding domain containing protein. (Os02t0100200-01)
Sequence	MRKRTASDRIRVPSSNPAPSPSPPPPPPPPEEPAVPMPHVGARRSTRVFVPKTPRPPQPS DPARVLRSGKRLAFSESPADAHWFQCKPNNCFHVHDHQRQLHDDPKPPPPPLPRTRSFGI VYSRKRRRRLPEPKEDTRFAIVFTRKRPKVAPFQHHAPNDLATIPCSSSREFASRTGFFD SHFLTLVDCIPTNKADAAMLIVLVDSSCSGSSQHFLRLLLSVLRWMRSCRRGKVRNLASF LSSDAVATALALRGLHFVQLQCRRDCALSQRALVQCGWCELRGAKDSEPLLSVNFLAVPS YFQILHLLIALESMYLPAVIRTRMHLVGGAEEIYPRTLLEEDSESLSTGDTDPAVDLCSN KLCSVAQDYVPLEEIAGVVVHGLRLKKHQRKRSSMRHPLSRQRLAARFPDKVVATNQTDV ARQTEADAPPSVSPELPLEPVKPKAALEISLDLLENMDDSDVSTPIGSNGKQKRSSLKSP IERMNERLALAEVRQNIDSVHCRANLLIIQPDRCWREEGAEVMLEPSESNEWCIAVKIHG VNRISLKPSEQRFYVVNRFTHAYILAVDDGLKIEFSDKWDWLLFKELQIEGRERNSQGKM IPIPGVNEVSDDMGVIGTYPFSRPVPDYIRMADDEVGRALSRDSVYDLDSEDEQWLTQLN HSDSDRKSAHLNHISYEDFEKMITTFEKDAFNNPEGTSDLDQILSRYPTLEKDHNVLAVH EYWINKRYKKGVPLLRILQGATLRRGQLSQRSIKKKRSFKRQRSQAGRGKPDICLQDANG AEEEALRRVVEAERAATQAGETAVRLRSRAQRLMAKAELVAYKSIMALRIAEAARISDSS RDLVLTTLD

Transcript Sequence

Transcript ID	Os02t0100200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:9298:13896:-1 gene:Os02g0100200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Steroid nuclear receptor, ligand-binding domain containing protein. (Os02t0100200-01)
Sequence	ACCCGCAACCCCAACGGAGGAGGAAGGGAAGAAGGGAGGAAACCCTAAAATTCCTCTTCT CCTTCTGCTCTCGATTCGATTCGATCTCGTCGCCACGCCCCCGCCCCCGCCCCCGCCCCG CCCCGCAAGCCGCCGATCTGTTGCGCCTCGTCAAGACCCCCCAGCCCAAGATCTGATTCG TTTCGATTCCGAGCTGAGCAGCAGCAGGAGCAGGAGGAGGAGGAGGAGCTCATCGATTTG GTGGTTGCTGATGGGCGGCGCATCCATGTTGGATGAGGAAGCGCACTGCATCTGATCGCA TTCGGGTCCCCTCCAGCAACCCCGCGCCATCGCCGTCGCCGCCGCCGCCGCCGCCGCCGC CGGAGGAACCTGCCGTGCCCATGCCGCATGTTGGGGCCCGCCGCTCCACGCGCGTCTTCG TGCCCAAGACGCCCAGGCCGCCTCAGCCTTCTGATCCTGCCAGGGTCCTCCGCTCCGGCA AGCGCCTCGCCTTCTCCGAATCCCCCGCCGACGCCCACTGGTTCCAGTGCAAGCCCAACA ACTGCTTCCACGTCCATGACCACCAACGCCAACTTCACGACGACCCCAAGCCACCGCCGC CGCCTCTGCCGCGCACAAGGTCCTTCGGGATCGTCTACAGCAGGAAGCGCCGCCGCCGCC TCCCCGAACCCAAGGAGGACACCAGGTTTGCCATTGTCTTCACTAGGAAGAGACCCAAGG TCGCCCCTTTTCAGCACCACGCCCCGAACGACCTTGCCACCATCCCATGCTCCTCTTCCA GGGAGTTTGCCTCCAGGACTGGCTTCTTTGATTCCCATTTCTTGACCCTGGTGGATTGTA TTCCCACTAATAAAGCTGACGCTGCCATGCTTATTGTCCTTGTGGATTCATCTTGCTCTG GGAGCTCTCAGCACTTCTTGCGCCTCCTCCTCTCTGTGCTGCGCTGGATGCGTAGCTGCC GACGGGGCAAGGTCCGAAACCTTGCCTCCTTTCTCTCGTCCGATGCTGTCGCCACTGCGC TTGCATTGCGGGGATTGCATTTTGTCCAGCTTCAATGCCGGAGAGACTGTGCATTGTCAC AGAGGGCTTTGGTGCAATGTGGCTGGTGTGAGCTTCGTGGTGCCAAGGATTCTGAACCAT TGTTGTCTGTCAATTTCTTGGCAGTCCCTTCTTACTTCCAGATTTTGCACTTGTTAATAG CACTCGAGTCAATGTATCTTCCAGCTGTGATTCGTACGAGAATGCATTTGGTTGGTGGAG CTGAAGAAATTTATCCTCGCACCCTATTGGAGGAGGATTCTGAATCTCTGAGCACTGGGG ATACTGATCCTGCTGTTGACCTGTGTAGCAACAAACTTTGCAGTGTGGCTCAAGATTATG TGCCCCTTGAAGAGATTGCAGGAGTGGTGGTCCATGGTCTGAGGCTAAAGAAGCATCAAA GGAAGAGAAGCTCTATGCGGCATCCCCTCAGTCGACAGCGTCTTGCTGCAAGATTTCCCG ACAAGGTAGTTGCAACAAACCAGACCGATGTGGCTAGACAGACAGAAGCGGATGCGCCAC CCTCAGTTAGTCCGGAGCTTCCACTGGAGCCTGTCAAACCTAAAGCAGCACTGGAAATCT CTCTTGATTTGCTTGAAAACATGGATGACAGTGATGTTTCAACTCCTATAGGATCAAATG GGAAGCAAAAGAGGTCTTCTTTGAAAAGTCCCATTGAGCGCATGAATGAAAGGTTGGCTT TGGCTGAGGTTAGACAGAATATAGATTCTGTTCACTGCAGAGCAAACCTTTTAATTATTC AACCTGATAGGTGCTGGAGGGAAGAAGGCGCTGAAGTTATGCTGGAACCATCGGAATCAA ATGAGTGGTGTATAGCTGTGAAGATACATGGTGTCAATAGAATATCTCTGAAGCCTTCGG AGCAGAGGTTTTATGTTGTTAACCGGTTCACCCATGCCTATATTTTGGCAGTTGATGATG GATTGAAGATTGAGTTCTCTGATAAATGGGACTGGCTTTTGTTTAAGGAGTTGCAAATTG AGGGTCGGGAGCGCAATTCCCAGGGAAAGATGATACCAATTCCTGGTGTAAATGAGGTTT CTGATGACATGGGAGTGATTGGAACATATCCTTTTTCACGCCCTGTGCCAGACTATATCA GAATGGCGGATGATGAGGTTGGGCGAGCTCTCTCAAGGGACTCTGTATATGATCTGGATT CTGAGGATGAACAGTGGCTCACCCAGTTGAATCATTCAGATTCTGACAGAAAAAGCGCAC ATCTTAATCATATTTCTTATGAAGATTTTGAAAAGATGATTACCACGTTTGAAAAGGATG CTTTCAACAACCCTGAAGGAACTAGTGATTTGGATCAGATTCTTTCCAGATACCCTACTT TGGAAAAGGACCATAATGTCCTTGCTGTGCATGAATATTGGATAAACAAGAGATATAAGA AAGGTGTACCACTGCTAAGGATATTGCAGGGTGCAACACTAAGACGAGGACAACTGTCAC AAAGATCTATTAAGAAAAAAAGATCTTTCAAGAGACAAAGAAGCCAAGCTGGCCGTGGAA AGCCTGACATATGCTTGCAAGATGCTAATGGTGCTGAAGAGGAGGCTTTGCGGAGAGTTG TGGAAGCCGAACGTGCTGCAACACAGGCAGGAGAAACAGCTGTTCGTCTGCGCAGTAGAG CTCAGCGTCTCATGGCAAAGGCTGAGCTGGTGGCATACAAATCTATTATGGCCCTCAGGA TTGCTGAGGCTGCTAGGATATCTGACTCGTCACGGGATCTTGTTTTGACGACCCTCGACT AGTGAAGAATGTGAGTGAGATGTTCATTGATTTGTGTGAAGAGCATAGTAGCCAATAGTT TGTTTTCCTCTTTTTTGCCGCATCATTTCAATGCTACGTGGTATTTGGCTTTCGGGTAAG CTGTGGGCTGTGGGTCTCTTTTTTCCTCCCCACCTGTTTTAACTTTGTGAAGCCAATCTT TGTAGCGGATGCTTGAACTCAACTGTAATCTCTTGTGTACATGATAGTGGTTAGTTAGAT TGTGTG