Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

CDS Sequence

CDS ID

Os01t0977400-01

CDS Infomation

cds chromosome:IRGSP-1.0:1:43196275:43198525:1 gene:Os01g0977400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0977400-01)

Sequence

TCGGCGTCGGCGTCGGCGTCGCTCCTCCTCCAGCTACAGGACCACATCGCCAGCGGCCAC
CTCTCCCGCGCTCACCACCTGTTCGATCAAATCCCCAGCCCGGACGTTCGCACCTACAAC
GACCTCATCCGAGCCTACTCCTCCTCCTCACCGACCGCCGCTGCGGATGGCCTCCACCTA
TACCGCCGTATGCTCCGCCACCGCGTCGCCCCTAACAACTACACCTTCCCCTTCGCCCTC
AAGGCCTGCTCTGCGCTGGCCGACCACCACTGCGGCCGCGCCATCCACCGCCACGCCATC
CACGCGGGCCTCCAGGCCGACCTTTTCGTCTCCACCGCCCTCCTCGACATGTACGTCAAG
TGCGCTTGCCTACCCGACGCCGCCCACATCTTCGCCACCATGCCCGCCAGGGATCTCGTC
GCCTGGAACGCCATGCTTGCCGGCTACGCGCACCATGGCATGTACCACCACGCGGTTGCT
CACCTCCTCAGCATGCAGATGCAGATGCATCGGCTCAGGCCCAACGCCTCCACCCTCGTG
GCGCTCCTTCCGCTCCTTGCCCAGCAGGGGGCGCTCGCCCAGGGCACCAGCGTCCACGCC
TACTGCATTCGTGCCTGCCTCCACCCCAACCGCAACAGCAAGAGCAAGCTGACGGACGGG
GTGCTCCTCGGCACCGCGCTCCTGGATATGTACGCAAAGTGCGGGAGCCTGCTCTATGCT
CGCAGGGTGTTCGATGCCATGCCTGCCAGGAACGAGGTCACCTGGAGCGCACTTATCGGA
GGCTTTGTGCTGTGCAGCAGAATGACCCAGGCCTTCCTTCTGTTCAAGGCCATGCTAGCC
CAGGGCCTCTGCTTTCTTTCTCCCACTTCCATTGCCAGTGCTCTCAGGGCCTGCGCCTCC
CTCGACCATCTCCGTATGGGTGAACAGCTGCATGCTTTGCTTGCTAAATCTGGTGTCCAC
GCCGACTTGACTGCAGGGAACTCACTTCTCTCGATGTACGCCAAGGCTGGCTTGATTGAC
CAGGCAATAGCTTTGTTTGATGAGATGGCCGTCAAGGACACTGTCTCCTACAGTGCGCTT
GTATCAGGGTATGTGCAGAATGGCAGGGCAGAGGAGGCGTTCCTTGTCTTCAAGAAGATG
CAGGCATGCAATGTAGAACCAGATGCTGCAACAATGGTCTCGCTCATCCCAGCTTGCTCA
CACCTGGCGGCTTTGCAGCATGGAAGGTGCAGTCATGGTTCTGTCATAATCCGTGGACTC
GCATCAGAGACTTCTATATGCAACGCGTTAATAGATATGTACGCAAAGTGTGGGCGGATC
GATCTCTCCAGGCAGGTTTTCAACATGATGCCATCTCGGGATATTGTGTCATGGAATACT
ATGATTGCAGGATATGGAATCCATGGACTAGGGAAAGAAGCCACTGCATTGTTCTTAGAG
ATGAATAATCTAGGTTTTCCACCAGATGGTGTCACATTCATCTGCTTACTTTCGGCTTGC
AGCCATTCTGGACTTGTGATTGAAGGGAAGCACTGGTTTCATGTGATGGGACACGGGTAT
GGTCTAACTCCCAGGATGGAGCACTATATCTGCATGGTTGATCTTTTGTCAAGAGGTGGT
TTCCTCGATGAAGCCTACGAATTTATCCAGAGCATGCCACTGAGAGCAGATGTTCGTGTG
TGGGTAGCCTTGCTTGGAGCTTGCCGGGTTTATAAGAACATTGATTTAGGAAAGAAGGTG
TCAAGGATGATCCAGGAGCTAGGGCCCGAGGGCACCGGCAACTTTGTTTTGCTGTCCAAC
ATATACAGCGCTGCTGGGAGATTCGATGAGGCGGCGGAGGTTCGGATAATACAGAAGGTA
CAGGGTTTTAAGAAGAGTCCAGGCTGCAGTTGGATTGAGATAAACGGCTCCCTACATGCA
TTTGTTGGGGGAGACCAATCTCATCCACAATCACCTGAAATATATCGAGAGCTGGATAAC
ATTCTAGTAGGTATTAAGAAACTGGGTTACCAGCCCGATACCAGTTTTGTTTTGCAAGAT
CTGGAGGAAGAGGAAAAGGAGAAGGCACTCATCTGTCATAGTGAAAAGCTAGCTATAGCC
TATGGTATCCTGAGTCTTAGTGAAGATAAGACCATTTTTGTTACTAAGAATCTCCGCGTT
TGTGGGGACTGTCATACTGTAATCAAGCACATAAGCTTAGTGAAGCGCAGGGCTATCATT
GTACGAGATGCTAATAGGTTTCATCATTTC

Peptide Sequence

PEP ID

Os01t0977400-01

PEP Infomation

pep chromosome:IRGSP-1.0:1:43196275:43198525:1 gene:Os01g0977400 transcript:Os01t0977400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0977400-01)

Sequence

SASASASLLLQLQDHIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHL
YRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVK
CACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV
ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA
RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS
LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL
VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL
ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE
MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG
FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN
IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN
ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV
CGDCHTVIKHISLVKRRAIIVRDANRFHHF

Transcript Sequence

Transcript ID

Os01t0977400-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:1:43196275:43198525:1 gene:Os01g0977400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0977400-01)

Sequence

GTCGGCGTCGGCGTCGGCGTCGCTCCTCCTCCAGCTACAGGACCACATCGCCAGCGGCCA
CCTCTCCCGCGCTCACCACCTGTTCGATCAAATCCCCAGCCCGGACGTTCGCACCTACAA
CGACCTCATCCGAGCCTACTCCTCCTCCTCACCGACCGCCGCTGCGGATGGCCTCCACCT
ATACCGCCGTATGCTCCGCCACCGCGTCGCCCCTAACAACTACACCTTCCCCTTCGCCCT
CAAGGCCTGCTCTGCGCTGGCCGACCACCACTGCGGCCGCGCCATCCACCGCCACGCCAT
CCACGCGGGCCTCCAGGCCGACCTTTTCGTCTCCACCGCCCTCCTCGACATGTACGTCAA
GTGCGCTTGCCTACCCGACGCCGCCCACATCTTCGCCACCATGCCCGCCAGGGATCTCGT
CGCCTGGAACGCCATGCTTGCCGGCTACGCGCACCATGGCATGTACCACCACGCGGTTGC
TCACCTCCTCAGCATGCAGATGCAGATGCATCGGCTCAGGCCCAACGCCTCCACCCTCGT
GGCGCTCCTTCCGCTCCTTGCCCAGCAGGGGGCGCTCGCCCAGGGCACCAGCGTCCACGC
CTACTGCATTCGTGCCTGCCTCCACCCCAACCGCAACAGCAAGAGCAAGCTGACGGACGG
GGTGCTCCTCGGCACCGCGCTCCTGGATATGTACGCAAAGTGCGGGAGCCTGCTCTATGC
TCGCAGGGTGTTCGATGCCATGCCTGCCAGGAACGAGGTCACCTGGAGCGCACTTATCGG
AGGCTTTGTGCTGTGCAGCAGAATGACCCAGGCCTTCCTTCTGTTCAAGGCCATGCTAGC
CCAGGGCCTCTGCTTTCTTTCTCCCACTTCCATTGCCAGTGCTCTCAGGGCCTGCGCCTC
CCTCGACCATCTCCGTATGGGTGAACAGCTGCATGCTTTGCTTGCTAAATCTGGTGTCCA
CGCCGACTTGACTGCAGGGAACTCACTTCTCTCGATGTACGCCAAGGCTGGCTTGATTGA
CCAGGCAATAGCTTTGTTTGATGAGATGGCCGTCAAGGACACTGTCTCCTACAGTGCGCT
TGTATCAGGGTATGTGCAGAATGGCAGGGCAGAGGAGGCGTTCCTTGTCTTCAAGAAGAT
GCAGGCATGCAATGTAGAACCAGATGCTGCAACAATGGTCTCGCTCATCCCAGCTTGCTC
ACACCTGGCGGCTTTGCAGCATGGAAGGTGCAGTCATGGTTCTGTCATAATCCGTGGACT
CGCATCAGAGACTTCTATATGCAACGCGTTAATAGATATGTACGCAAAGTGTGGGCGGAT
CGATCTCTCCAGGCAGGTTTTCAACATGATGCCATCTCGGGATATTGTGTCATGGAATAC
TATGATTGCAGGATATGGAATCCATGGACTAGGGAAAGAAGCCACTGCATTGTTCTTAGA
GATGAATAATCTAGGTTTTCCACCAGATGGTGTCACATTCATCTGCTTACTTTCGGCTTG
CAGCCATTCTGGACTTGTGATTGAAGGGAAGCACTGGTTTCATGTGATGGGACACGGGTA
TGGTCTAACTCCCAGGATGGAGCACTATATCTGCATGGTTGATCTTTTGTCAAGAGGTGG
TTTCCTCGATGAAGCCTACGAATTTATCCAGAGCATGCCACTGAGAGCAGATGTTCGTGT
GTGGGTAGCCTTGCTTGGAGCTTGCCGGGTTTATAAGAACATTGATTTAGGAAAGAAGGT
GTCAAGGATGATCCAGGAGCTAGGGCCCGAGGGCACCGGCAACTTTGTTTTGCTGTCCAA
CATATACAGCGCTGCTGGGAGATTCGATGAGGCGGCGGAGGTTCGGATAATACAGAAGGT
ACAGGGTTTTAAGAAGAGTCCAGGCTGCAGTTGGATTGAGATAAACGGCTCCCTACATGC
ATTTGTTGGGGGAGACCAATCTCATCCACAATCACCTGAAATATATCGAGAGCTGGATAA
CATTCTAGTAGGTATTAAGAAACTGGGTTACCAGCCCGATACCAGTTTTGTTTTGCAAGA
TCTGGAGGAAGAGGAAAAGGAGAAGGCACTCATCTGTCATAGTGAAAAGCTAGCTATAGC
CTATGGTATCCTGAGTCTTAGTGAAGATAAGACCATTTTTGTTACTAAGAATCTCCGCGT
TTGTGGGGACTGTCATACTGTAATCAAGCACATAAGCTTAGTGAAGCGCAGGGCTATCAT
TGTACGAGATGCTAATAGGTTTCATCATTTC