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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0976800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:43172242:43173072:-1 gene:Os01g0976800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 10 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0976800-01)
Sequence

ATGGATATGGATTCTTCCTCCTCCCCGGTGGACAAGGTGGATCCCGACGAGTGCAACGGC
TCTAAGGCTTGCGCTGACTGCCACACTACCAAGACTCCGCTATGGCGAGGCGGACCCGGA
GGACCCAAGTCGCTGTGCAACGCATGCGGGATCCGGTATCGGAAGAGGCGGCGGGCGGCG
CTCGGCCTGGACTCTTCCGCCACCGCCACCGCCACCGACGGAGCGGAGCAGCAGAAGAAG
ACTAAGGCCAAGAAGGAAAAGGCACAGGAGGAGGAGGTCACCATGGAGCTCCACACGGTG
GGCTTCCGCAGCAAGGACGCTGCTGTGTTCAAGCAGCGCCGGCGGATGCGCCGCAGGAAA
TGCCTTGGCGAGGAGGAGAGGGCCGCCATCCTGCTCATGGCACTCTCCTCGGGCGTCATC
TACGCCTGA

Peptide Sequence

PEP ID

Os01t0976800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:43172242:43173072:-1 gene:Os01g0976800 transcript:Os01t0976800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 10 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0976800-01)
Sequence

MDMDSSSSPVDKVDPDECNGSKACADCHTTKTPLWRGGPGGPKSLCNACGIRYRKRRRAA
LGLDSSATATATDGAEQQKKTKAKKEKAQEEEVTMELHTVGFRSKDAAVFKQRRRMRRRK
CLGEEERAAILLMALSSGVIYA

Transcript Sequence

Transcript ID

Os01t0976800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:43172242:43173072:-1 gene:Os01g0976800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 10 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0976800-01)
Sequence

ATCGATCCGCCCCCAGATCGCGGCCGCCGGTAGCTAGCTGCAGCTGCAGATGGATATGGA
TTCTTCCTCCTCCCCGGTGGACAAGGTGGATCCCGACGAGTGCAACGGCTCTAAGGCTTG
CGCTGACTGCCACACTACCAAGACTCCGCTATGGCGAGGCGGACCCGGAGGACCCAAGTC
GCTGTGCAACGCATGCGGGATCCGGTATCGGAAGAGGCGGCGGGCGGCGCTCGGCCTGGA
CTCTTCCGCCACCGCCACCGCCACCGACGGAGCGGAGCAGCAGAAGAAGACTAAGGCCAA
GAAGGAAAAGGCACAGGAGGAGGAGGTCACCATGGAGCTCCACACGGTGGGCTTCCGCAG
CAAGGACGCTGCTGTGTTCAAGCAGCGCCGGCGGATGCGCCGCAGGAAATGCCTTGGCGA
GGAGGAGAGGGCCGCCATCCTGCTCATGGCACTCTCCTCGGGCGTCATCTACGCCTGAAC
CTCCAACCGAATCAACCTCTGGCGCCATGGCAGGAAGAAGAAGCAGCGATTCCTTCCCCT
CTCTTTTTTTCCCTCCCCCCGGCGCTATGGCAGTCACCGAAGCTAGCTAATAATCAATCT
TGTCTTGTGGTGTAGTAGCTCTTGTTGTTCTTGCCTTAAGCTGTAACGACGTCTGTAATG
CGACTCTTTGTCTGTGTCTC