Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0976600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:43159520:43162849:-1 gene:Os01g0976600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COQ5 description:Similar to Methlytransferase, UbiE/COQ5 family. (Os01t0976600-01)
Sequence

ATGGCTCTGCGATCGGCGGCCGGTAGGCTGGCGTCGTCCAGCCGCCGCCGCCTCCTCTCT
CCGCCCACCAGCATCCACACGGCCTTCCTCCACTCCCACGCCACCAGCTTCGGATACAAG
CAAGTAGCTGAAGAGGACAAAAGCAAATTGGTCGGTAACGTCTTCAGCAGCGTCGCCTCC
AGTTACGATCTCATGAACGATCTTATGAGCGTTGGACTACATAGGTTGTGGAAGGACAGG
CTCATCTCAAAGCTTAATCCTTTTCCTGGGATGAAGCATCTAGATGTGGCTGGTGGAACA
GGGGATGTTGCCTTCCGTGCGCTCGAGAGAATCAATAGCGTGAGCCATAGAGCTATGCAG
GGTACTCTTACTGATATTGAAGAAGAAACACAAATCTATGTTTGTGACATTAATCCAAAT
ATGCTGAATGTTGGAAAGAAACGTGCTTCAGAAAGAGGATACAAAGAAGGCCATTGCCTT
AGCTGGATACAAGGAGATGCTGAAGCTCTGAGTTTTGAGGATGGATCTATGGATGGCTAT
ACTATTGCGTTTGGGATCAGAAATGTGACACACATTGAAAAAGCTCTATCAGAAGCTTAT
AGAGTCCTAAAGCGAGGGGGAAGGTTCCTATGCTTGGAATTGAGTCATGTGGATGTTCCG
CTTTTTAAAGAGATTTATGATGTTTATTCATTTTCTGTGATTCCGGCTGTGGGAGAACTA
GTGGCCGGTGATCGCCAGTCATACCAATACTTGGTTGAGAGTATCCGCCGGTTTCCAAAT
CAGGAAAAGTTTGCTCAGATGATCCAAGAAGCCGGATTTGAGAGGGTAGAATACGAAAAT
CTGGTGGGTGGTGTGGTTGCCATTCACTCTGGACTGAAACTGTAG

Peptide Sequence

PEP ID

Os01t0976600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:43159520:43162849:-1 gene:Os01g0976600 transcript:Os01t0976600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COQ5 description:Similar to Methlytransferase, UbiE/COQ5 family. (Os01t0976600-01)
Sequence

MALRSAAGRLASSSRRRLLSPPTSIHTAFLHSHATSFGYKQVAEEDKSKLVGNVFSSVAS
SYDLMNDLMSVGLHRLWKDRLISKLNPFPGMKHLDVAGGTGDVAFRALERINSVSHRAMQ
GTLTDIEEETQIYVCDINPNMLNVGKKRASERGYKEGHCLSWIQGDAEALSFEDGSMDGY
TIAFGIRNVTHIEKALSEAYRVLKRGGRFLCLELSHVDVPLFKEIYDVYSFSVIPAVGEL
VAGDRQSYQYLVESIRRFPNQEKFAQMIQEAGFERVEYENLVGGVVAIHSGLKL

Transcript Sequence

Transcript ID

Os01t0976600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:43159520:43162849:-1 gene:Os01g0976600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COQ5 description:Similar to Methlytransferase, UbiE/COQ5 family. (Os01t0976600-01)
Sequence

ATCTGGCCCAATAATAGCCCACACAACCCTAGGCTGCGCTAGTGTCGTCGGTCCCCATCC
CATTCGGCCACCGATCCCAATCTCAATCTGACGCCGCCGCCGGCATCCCTGACTCACCGA
CGCGGCTGCACCAGGCGCCGCCGCCGCCGCCTCCGCCTTGATCGTAAGGAAGTAAGTTTG
GAGCACCATGGCTCTGCGATCGGCGGCCGGTAGGCTGGCGTCGTCCAGCCGCCGCCGCCT
CCTCTCTCCGCCCACCAGCATCCACACGGCCTTCCTCCACTCCCACGCCACCAGCTTCGG
ATACAAGCAAGTAGCTGAAGAGGACAAAAGCAAATTGGTCGGTAACGTCTTCAGCAGCGT
CGCCTCCAGTTACGATCTCATGAACGATCTTATGAGCGTTGGACTACATAGGTTGTGGAA
GGACAGGCTCATCTCAAAGCTTAATCCTTTTCCTGGGATGAAGCATCTAGATGTGGCTGG
TGGAACAGGGGATGTTGCCTTCCGTGCGCTCGAGAGAATCAATAGCGTGAGCCATAGAGC
TATGCAGGGTACTCTTACTGATATTGAAGAAGAAACACAAATCTATGTTTGTGACATTAA
TCCAAATATGCTGAATGTTGGAAAGAAACGTGCTTCAGAAAGAGGATACAAAGAAGGCCA
TTGCCTTAGCTGGATACAAGGAGATGCTGAAGCTCTGAGTTTTGAGGATGGATCTATGGA
TGGCTATACTATTGCGTTTGGGATCAGAAATGTGACACACATTGAAAAAGCTCTATCAGA
AGCTTATAGAGTCCTAAAGCGAGGGGGAAGGTTCCTATGCTTGGAATTGAGTCATGTGGA
TGTTCCGCTTTTTAAAGAGATTTATGATGTTTATTCATTTTCTGTGATTCCGGCTGTGGG
AGAACTAGTGGCCGGTGATCGCCAGTCATACCAATACTTGGTTGAGAGTATCCGCCGGTT
TCCAAATCAGGAAAAGTTTGCTCAGATGATCCAAGAAGCCGGATTTGAGAGGGTAGAATA
CGAAAATCTGGTGGGTGGTGTGGTTGCCATTCACTCTGGACTGAAACTGTAGAACATTCT
GGGTTTCAAGTTTGATGGATACTTTACTGTTACTCCTACGGCAACGGCAAGGTCTTGTGA
AGCGGGCGTTAAGAATCAGGACCTAACGAACAAACTAACTCAATCTTGTACCAGTAGTTA
GCATTGCAATAAATACATGCAGTGTTTCTGTACATGTTTCTTGTATTTATTTTTTTTAGA
TGAAAGGCTTTTGACAGCCCAGCTTTACTGAAAAGCATAAAATGTTGTTTTGACAACCAA
AACAAACAACTAAAAGGGAGTCACACTAGATTGAC