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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0976300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:43141847:43142667:1 gene:Os01g0976300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0976300-01)
Sequence

ATGGCGTCTGTGGTGTTGAAGGATCTGAACAAGCGGCTGCTGGGCCTCTCCTGCTCCTCC
GCCGCCTCCACCTCCATCGTCCTCTCCGGCCACTCGCCGCCGCACCTCCGAGACCCAGCT
CGCACCAGCAACAGCAGCAAGAAGAAGAAGACGAAGGCGAACAAGAGCAAGCAGCAGCTG
GTTAGCCCTGCAAGCTCGTCCAGGTTCCTTCTCAACTCCTCCCGGATGCAACCCAGCGCG
GATGAGTTGCCGCCGCCCTTCGTCATCCCGGTTGCTGTCGCGGCTGCGGCGGAGGAGAAT
GAGATCGTAGCTGCTGCAGTGGAAGGAGGAGGAGGAGAAGAGGAAAAGAGAGAGTCATCG
TCGCAGGTGGAGGTGGTGGTCCTGCGGGTGTCCCTGCACTGCAAGGGATGCGCGGGGAAG
GTGAAGAAGCACATCTCCAAGATGGAGGGCGTCACCTCCTTGGACATCGACATCGCCACC
AAGAAGGTCACCGTCGTCGGCCACGTCACGCCGCTGTCCGTGCTCACTGCCGTCTCCAAG
ATCAAGCCCGCACAGTTCTGGCCCATCTCCTCCTCCTCATCGCCCATGCCTCCACGCGCT
TCCGCTTCCTTCTGA

Peptide Sequence

PEP ID

Os01t0976300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:43141847:43142667:1 gene:Os01g0976300 transcript:Os01t0976300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0976300-01)
Sequence

MASVVLKDLNKRLLGLSCSSAASTSIVLSGHSPPHLRDPARTSNSSKKKKTKANKSKQQL
VSPASSSRFLLNSSRMQPSADELPPPFVIPVAVAAAAEENEIVAAAVEGGGGEEEKRESS
SQVEVVVLRVSLHCKGCAGKVKKHISKMEGVTSLDIDIATKKVTVVGHVTPLSVLTAVSK
IKPAQFWPISSSSSPMPPRASASF

Transcript Sequence

Transcript ID

Os01t0976300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:43141847:43142667:1 gene:Os01g0976300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0976300-01)
Sequence

GAGGCACGCGCGCGCGATGCGAGAGCAAAGCAAAATCAGCAGCAAACTACAGTAGTAGTA
CAGTAATTAACAAGCAGAGGAGGCAGTAGGCATGGCGTCTGTGGTGTTGAAGGATCTGAA
CAAGCGGCTGCTGGGCCTCTCCTGCTCCTCCGCCGCCTCCACCTCCATCGTCCTCTCCGG
CCACTCGCCGCCGCACCTCCGAGACCCAGCTCGCACCAGCAACAGCAGCAAGAAGAAGAA
GACGAAGGCGAACAAGAGCAAGCAGCAGCTGGTTAGCCCTGCAAGCTCGTCCAGGTTCCT
TCTCAACTCCTCCCGGATGCAACCCAGCGCGGATGAGTTGCCGCCGCCCTTCGTCATCCC
GGTTGCTGTCGCGGCTGCGGCGGAGGAGAATGAGATCGTAGCTGCTGCAGTGGAAGGAGG
AGGAGGAGAAGAGGAAAAGAGAGAGTCATCGTCGCAGGTGGAGGTGGTGGTCCTGCGGGT
GTCCCTGCACTGCAAGGGATGCGCGGGGAAGGTGAAGAAGCACATCTCCAAGATGGAGGG
CGTCACCTCCTTGGACATCGACATCGCCACCAAGAAGGTCACCGTCGTCGGCCACGTCAC
GCCGCTGTCCGTGCTCACTGCCGTCTCCAAGATCAAGCCCGCACAGTTCTGGCCCATCTC
CTCCTCCTCATCGCCCATGCCTCCACGCGCTTCCGCTTCCTTCTGATTTCTCATCCACCC
TGCTTACTGCTTGCTTCACCCTTAATTTTAGATTATTATGTGCACTAGTATCTGTAAGTA
CTACTGTATACGGAAATTTATAAAAGCCATTTTTTTTCATG