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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0975800-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:43112781:43113407:1 gene:Os01g0975800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 79 description:Similar to DNA binding protein. (Os01t0975800-00)
Sequence

ATGGCGATGCAGGTGGCGGCGCCGTCGCGGAGGAGGCCGAGCTTGGGGCGGCAGAAGATC
GAGATCCGGCGCATCGAGAGCGAGGAGGCACGTCAGGTGTGCTTCTCCAAGCGCCGTGCC
GGCTTCTTCAAGAAGGCCAGCGAGCTGTCCATTCTGTGCAGCGCCGACGTGGCCGCCGTC
GTCTTCTCCCCCGCCGGCAAGGCCTACTCCTTCGGCCACCCCTCCGTGGAGTGCCTCCTG
GAGCGATTCCTGCCGGACTCGTCGTCGGGAGCGGCGGCGCGGGTGCGGCGAGGAGCGAAT
AATAATGGTGGTGGTGGGATGGTCGGGGAGCTCAACAGGCAGTACGGCGAGCTGCGCGCG
ATGGTGGAGGCGCACAAGGCGCGGCGGGAGAGGGCGGACGAGAAGATAGAGATGGAGCGC
GCGGCGGGGAGGTGGCTGCCCATGGACGCCGATGTGCGCCGCATGTCGCCGGAGGAGCTC
ATGGCTTTCGGGACGGGCCTCATGGCTGTGCAGGCTGCCGTCTCCGCGCGCGCCGACCAG
ATGCTGCGCGACGCGCTCCTCATTGGCCGCAGGCCGCCCACCACCACCACCGCCGGCTTC
GGCTTCTTCCACATGCCACACTACTGA

Peptide Sequence

PEP ID

Os01t0975800-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:43112781:43113407:1 gene:Os01g0975800 transcript:Os01t0975800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 79 description:Similar to DNA binding protein. (Os01t0975800-00)
Sequence

MAMQVAAPSRRRPSLGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAV
VFSPAGKAYSFGHPSVECLLERFLPDSSSGAAARVRRGANNNGGGGMVGELNRQYGELRA
MVEAHKARRERADEKIEMERAAGRWLPMDADVRRMSPEELMAFGTGLMAVQAAVSARADQ
MLRDALLIGRRPPTTTTAGFGFFHMPHY

Transcript Sequence

Transcript ID

Os01t0975800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:43112781:43113407:1 gene:Os01g0975800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 79 description:Similar to DNA binding protein. (Os01t0975800-00)
Sequence

ATGGCGATGCAGGTGGCGGCGCCGTCGCGGAGGAGGCCGAGCTTGGGGCGGCAGAAGATC
GAGATCCGGCGCATCGAGAGCGAGGAGGCACGTCAGGTGTGCTTCTCCAAGCGCCGTGCC
GGCTTCTTCAAGAAGGCCAGCGAGCTGTCCATTCTGTGCAGCGCCGACGTGGCCGCCGTC
GTCTTCTCCCCCGCCGGCAAGGCCTACTCCTTCGGCCACCCCTCCGTGGAGTGCCTCCTG
GAGCGATTCCTGCCGGACTCGTCGTCGGGAGCGGCGGCGCGGGTGCGGCGAGGAGCGAAT
AATAATGGTGGTGGTGGGATGGTCGGGGAGCTCAACAGGCAGTACGGCGAGCTGCGCGCG
ATGGTGGAGGCGCACAAGGCGCGGCGGGAGAGGGCGGACGAGAAGATAGAGATGGAGCGC
GCGGCGGGGAGGTGGCTGCCCATGGACGCCGATGTGCGCCGCATGTCGCCGGAGGAGCTC
ATGGCTTTCGGGACGGGCCTCATGGCTGTGCAGGCTGCCGTCTCCGCGCGCGCCGACCAG
ATGCTGCGCGACGCGCTCCTCATTGGCCGCAGGCCGCCCACCACCACCACCGCCGGCTTC
GGCTTCTTCCACATGCCACACTACTGA