Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0974500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:43066717:43070166:-1 gene:Os01g0974500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinacetylesterase family protein. (Os01t0974500-01)
Sequence	ATGCCGCCTCTCTTCTCCGCGCCGGCGCTCCACCGCCGCCGCCTTCTCCGCCACGCCGCC GCATTCGCCCTTGTGCTCCTCGCCGTCGCCCTCCTCTTCCTCCTCCTCGTACACCCCCGC TCGCTCGGCACCCCTTCCCCTTCCCCGTCCTACGGCCACCGCCTCCCCACGCTCGTCGAC CTCACCCTAGTCCACGGCGCCAAGGAGAAGGGCGCTGTCTGCCTCGACGGGACCCCGCCT GGGTACCACTGGCTGCCAGGCTTCGGCGACGGATCTAACAAATGGCTCCTCCACCTAGAG GGCGGGAGCTGGTGCAGGAATCGCACGTCCTGTGATCATCGCAAGAAAACCAGTCTTGGC TCATCTGCTTACATGGAAACCCGGGTCGAGTTCGTCGGCATCCTGAGCGACGACAAGGCC CAGAACCCAGATTTTTACAACTGGAACAAGGTCAAGATCAGGTATTGTGATGGTGCCTCC TTATCTGGAAATGTCCAAGATGAACACCAGTATGGCGCCACTTTCTTCTTCAGAGGCCAG CGCATCTGGGAGGCCGTCATGGCTGAACTTCTACCCAAGGGTCTAGCCCGTGCTAAACAG GCTTTTCTTACAGGATGCTCTGCAGGTGGTCTATCCACATACATTCACTGTGATGATTTC CGTGCACTTTTACCAAAGGATTCTACTGTTAAGTGTCTTGCAGATGGTGGTTTTTTTCTT GACGTGGAAGACATTTCTGGGAGAAGGTATATGCGGGGCTTCTATAATGATGTTGCTCGT CAACAGGATTTGCGGAAACGGTTCCCTGGTTGTAGTTCAGATATGGAACCAGGGCAGTGC TTTTTCCCACAAGAAGTGGCGAAAGGCATCACCACCCCAATGTTTATTCTCAATCCAGCA TATGATGTTTGGCAGGTAGAGCATGTCTTGACTCCAGACGGATCTGACCCTCAAAATCTG TGGCAAGATTGCAGAATGGATATTACCAAGTGTAATACGAAACAGCTTGAAATTCTACAA GGTTTTAGAAAATCACTGCTTGATGCTATAAGTGAATTCAAGAAGAAAAGGGGCTGGGGC ATGTTCATTGATTCATGCTTTATACATTGCCAATCCATGAAGTCTTTGGCTTGGCACTCC CCATCTGCTTCGAGAATAAACAATAAGACTGTGGCTGAAGCGGTGGGCGACTGGTTCTTT GATCGGAGAGAGGTGAAGGAAATAGACTGTGAATATCCGTGCAACCCAACATGCTTCAAT GTTGTTCTTGAACAACCCTATCAGGAAGGCTGA

Peptide Sequence

PEP ID	Os01t0974500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:43066717:43070166:-1 gene:Os01g0974500 transcript:Os01t0974500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinacetylesterase family protein. (Os01t0974500-01)
Sequence	MPPLFSAPALHRRRLLRHAAAFALVLLAVALLFLLLVHPRSLGTPSPSPSYGHRLPTLVD LTLVHGAKEKGAVCLDGTPPGYHWLPGFGDGSNKWLLHLEGGSWCRNRTSCDHRKKTSLG SSAYMETRVEFVGILSDDKAQNPDFYNWNKVKIRYCDGASLSGNVQDEHQYGATFFFRGQ RIWEAVMAELLPKGLARAKQAFLTGCSAGGLSTYIHCDDFRALLPKDSTVKCLADGGFFL DVEDISGRRYMRGFYNDVARQQDLRKRFPGCSSDMEPGQCFFPQEVAKGITTPMFILNPA YDVWQVEHVLTPDGSDPQNLWQDCRMDITKCNTKQLEILQGFRKSLLDAISEFKKKRGWG MFIDSCFIHCQSMKSLAWHSPSASRINNKTVAEAVGDWFFDRREVKEIDCEYPCNPTCFN VVLEQPYQEG

Transcript Sequence

Transcript ID	Os01t0974500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:43066717:43070166:-1 gene:Os01g0974500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinacetylesterase family protein. (Os01t0974500-01)
Sequence	CTCAACAGATCCAACAACAACAACTAGTCTCAGTCATGCCGCCTCTCTTCTCCGCGCCGG CGCTCCACCGCCGCCGCCTTCTCCGCCACGCCGCCGCATTCGCCCTTGTGCTCCTCGCCG TCGCCCTCCTCTTCCTCCTCCTCGTACACCCCCGCTCGCTCGGCACCCCTTCCCCTTCCC CGTCCTACGGCCACCGCCTCCCCACGCTCGTCGACCTCACCCTAGTCCACGGCGCCAAGG AGAAGGGCGCTGTCTGCCTCGACGGGACCCCGCCTGGGTACCACTGGCTGCCAGGCTTCG GCGACGGATCTAACAAATGGCTCCTCCACCTAGAGGGCGGGAGCTGGTGCAGGAATCGCA CGTCCTGTGATCATCGCAAGAAAACCAGTCTTGGCTCATCTGCTTACATGGAAACCCGGG TCGAGTTCGTCGGCATCCTGAGCGACGACAAGGCCCAGAACCCAGATTTTTACAACTGGA ACAAGGTCAAGATCAGGTATTGTGATGGTGCCTCCTTATCTGGAAATGTCCAAGATGAAC ACCAGTATGGCGCCACTTTCTTCTTCAGAGGCCAGCGCATCTGGGAGGCCGTCATGGCTG AACTTCTACCCAAGGGTCTAGCCCGTGCTAAACAGGCTTTTCTTACAGGATGCTCTGCAG GTGGTCTATCCACATACATTCACTGTGATGATTTCCGTGCACTTTTACCAAAGGATTCTA CTGTTAAGTGTCTTGCAGATGGTGGTTTTTTTCTTGACGTGGAAGACATTTCTGGGAGAA GGTATATGCGGGGCTTCTATAATGATGTTGCTCGTCAACAGGATTTGCGGAAACGGTTCC CTGGTTGTAGTTCAGATATGGAACCAGGGCAGTGCTTTTTCCCACAAGAAGTGGCGAAAG GCATCACCACCCCAATGTTTATTCTCAATCCAGCATATGATGTTTGGCAGGTAGAGCATG TCTTGACTCCAGACGGATCTGACCCTCAAAATCTGTGGCAAGATTGCAGAATGGATATTA CCAAGTGTAATACGAAACAGCTTGAAATTCTACAAGGTTTTAGAAAATCACTGCTTGATG CTATAAGTGAATTCAAGAAGAAAAGGGGCTGGGGCATGTTCATTGATTCATGCTTTATAC ATTGCCAATCCATGAAGTCTTTGGCTTGGCACTCCCCATCTGCTTCGAGAATAAACAATA AGACTGTGGCTGAAGCGGTGGGCGACTGGTTCTTTGATCGGAGAGAGGTGAAGGAAATAG ACTGTGAATATCCGTGCAACCCAACATGCTTCAATGTTGTTCTTGAACAACCCTATCAGG AAGGCTGACATGTGGTTCTTCGCCGTTGTAGTTTACCGATGATTTGAAGCAGAATATACC CACCCCTATGGGGCTCTCAGATACAGTATGTCCAGTTGAATGGGACACACACTAGTAGTA GTGCACCTCTTGAGGACCGTTCAAACATAGAAATATTGACAAG