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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0974100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:43044201:43046303:1 gene:Os01g0974100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to amino acid selective channel protein. (Os01t0974100-01)
Sequence

ATGGCTCACAGCGGCTTCTCCGGCAGCCTGACGTCGCCGAGGTTCGACCTCGCCGTCGAC
ATGGGCCATCCCTTCCTCAACCGCACCGTCGACGGCTTCCTCAAGATTGGCGCTGTTGGG
GCTTGCAAGGTCGCTGCCGAAGAGACCTTCGAGTGCCTTCACAGAGGGGACGTCTCAAAG
CACAAAGTTGAGAGTGCACTCAAGAAAATTTGCAAGGAAGGCGCATATTGGGGTACTATT
GCGGGTGTATATGTGGGCATGGAGTATGGAATCGAAAGAATCCGTGGTCACAGGGACTAG

Peptide Sequence

PEP ID

Os01t0974100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:43044201:43046303:1 gene:Os01g0974100 transcript:Os01t0974100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to amino acid selective channel protein. (Os01t0974100-01)
Sequence

MAHSGFSGSLTSPRFDLAVDMGHPFLNRTVDGFLKIGAVGACKVAAEETFECLHRGDVSK
HKVESALKKICKEGAYWGTIAGVYVGMEYGIERIRGHRD

Transcript Sequence

Transcript ID

Os01t0974100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:43044201:43046303:1 gene:Os01g0974100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to amino acid selective channel protein. (Os01t0974100-01)
Sequence

GACGACGAGATCGATCGAGCAACGAACAGCATATGGCTCACAGCGGCTTCTCCGGCAGCC
TGACGTCGCCGAGGTTCGACCTCGCCGTCGACATGGGCCATCCCTTCCTCAACCGCACCG
TCGACGGCTTCCTCAAGATTGGCGCTGTTGGGGCTTGCAAGGTCGCTGCCGAAGAGACCT
TCGAGTGCCTTCACAGAGGGGACGTCTCAAAGCACAAAGTTGAGAGTGCACTCAAGAAAA
TTTGCAAGGAAGGCGCATATTGGGGTACTATTGCGGGTGTATATGTGGGCATGGAGTATG
GAATCGAAAGAATCCGTGGTCACAGGGACTAGAAGAACGCGATGGTTGGAGGCGCCGTAA
CAGGAGCACTGGTGTCTGCGGCGAGCAACAGCCACAGGCAGAACGTGGTGAAGAACGCCA
TCACTGGGGGAGCCATCGCAACCGCTGCAGAGTTCCTCAATTACCTTACCTGAAGTCTGC
ATACTACTTGTTGTTGATCTGTGCCCCCAAGAAGAATAACACTCTACTCTTACTTGTTGG
AAAAAAATAGTATTAGCAACCACGCATATGCAAATTTTAATGCAGTAATAATAAGAGATG
GATCGATCGTTTTCCAGCTCTTGTATATGTGACTGGCCCTGCTTTATGTGTGTAGTGTTA
ATTTCAGCTTTAGCAGTACGTGATTAGTGATGGACAATAATTGTCGCAGACGTATCTATC
AATTGCTCCTGTTGTGTGATGCTTTAACTGTTGGAATCAAAGTTGCGTTGCCTTTGTTGT
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