Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0973300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42971420:42976876:1 gene:Os01g0973300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os01t0973300-01)
Sequence	CACGACTTACTTCCAGATGAAACTACATCTTTGGAGGACACGGTAGATGTTTTGTTCAGT GACAATTCCCCGGGAGTAGTGGGAGCTACTGCTGTTGCCTTTAACTCAGTTTGCCCAAAT TGTTTACCCTTGATATCAAAGCATTTCCAAAGGCTATGTGAGACACTCCCAGATATTGAA GAATGGGCTCAGATTCTTCTAATCGATATCATCTTGCGATATGTAATAGCTAGACATGGA TTGGTGAAGGATTCTTCAATTTTTGCTTCAAATTTGACTTTGAAGAGCCAGGGCAGTGGA GATTCAGCCCTTATTGGCAATGAAACTTGTGGCACTACATCAACCATCACATTGTTCCGA CATTACATTGAAGAATATTCGGAATGTTTAGAAGGTGACATAATCAACTGTTCATCCGTG ACCAGTAGCACAAACAATGATGTTGCACTACTTTTGAAATGTACATCGCCTCTTCTGTGG AGCCGAAACAGTGGAGTCATACTTGCAGCAGCAAGTGTTCATTGGATCATGGCTCCAGTT GACCAACTGAATAGAGTTGTTGGGCCAATTTTATTTACTCTACGCTCATCTCCTGATGCA ACATATGTGATGCTTGGCAACATACTAGTTTTTGCCAAGACAGCCCCACAATTGTTTGCT CCGTTCTATGAAGATTTCTTCATATGCACTTCAGATCCATATCAAACTAAGGCTTTGAAG CTTGAAATACTGACCACCATAGCCACAGAGTCCTCTATTCCAGCAATTTTTGAAGAATTT CAGGATTATATTAAAGAACCGGATAGGAGATTTGTGGCAGATACAGTTGCTGCTATTGCG CTGTGTGCCCAGAAGCTTCCCTCTATCACTACCAGTTGCCTTGGTGGGCTTTTGGCACTA GTATTTTATGAATCATCTATAAGTGATTCTGCTAACTTTGATGGAGAAGCTGCTGTTTTA GTTCAAGCAATTTTGTCTATCAAAGCAATAGTGAGAACAGATCCAGCATCTCATGAAAAG GTGATTGTACGCTTGGTCCACAGCCTGGACAAAATTAAGGAGCCTGCAGCACGATCCCTG ATTATTTGGATATTTGGAGAGTATAGTTCCATAGGAAATATCATTCCAAAGATAACTCCT GCTGTTCTCAAGTATCTTGCATGGTCCTTTGCTGCTGAAATGCTTGAGACAAAGCTTCAG ATCTTAAATGCTGCTGCAAAGGTTATCATACATTCTCCTGAAGAACACTTAGAAGAATTC AAAAAGATAATGGCCCATGTCATTAAGCTGGCTACATGTGATTTGAGTTATGACGTCCGT GATCGTGCCCGTTTTATATCAAGACTTTTGCCATACAGCACAACCTATTTAAATGGAAAC AACTCCTCATGTCAATCACATAATGAAGATATGTTTAAGGAACTGGCTAATCATATATTT GATGGGAAGATGCCATCAACATTCCATCCAACCAATAACTACCGGATTTATCTTCCTGGT TCCTTGTCACAGGTGATTCTTCATGCAGCTCCTGGTTACGCACCACTTCCAAAGCCTCAG AGTATGGAATTAATTCATAAGACCATGGAACCAACCAGAGGAGTAGGCAATTCTTCTGAA AGCATTAATTCTGATGCTGAATCTGGATCTTCAACATATGATGGTGGTTCTGTTTATGAT TCAGAGAGTGAAGTTGATGGCTCATCTGACAGGAATGCTGCTGATTCTAACACAAAAGAT AATCAAGAAGATCCCCTGGTCCATGTTTATGATGCAAGTGTAGATCAAGGTCAGACGGCT AGGGATGTCGAGGATAATTTTGCATCTCTCATCACTACTGATTTGACTGAATTAATGTCT AAGTCAGCCTTGGAAACATGGCTTGATGAAGCTCCTGCTGAACCAGTTCAGGTTTCTACA CAAGCATCCTCTGCTAGAGTGTCTTTTACCAATCGGAGCTTTGAGCGAAAACCTAAATTG CACATGTTGTTAGACCCATCTAATAGTAATGGTCTAAGTGTTCTTTATGCCTTTTCATCT GAGGTTTCACCCGTATCACGCTTGCTAGTGTGTGTAGACTTGTTATTTGAGAATGTTTCA ACAAACCAACTGGCAGATATAACAATTAAATCCGAGGAGGCTTCTGGTAGTGAGGATGGC TTGGACCAAACATTACAAGGATCTGCAAGTGTTCCAACTATTGTTCTTGATAAAGAGATA CAATTATTGGCTCCCGAACAAACGGAAAAGATGGTTCTTCAGGTTCACTTCCATCACCAT CTATTGCCCCTTAAGTTGTCTGTGCTCTGCAATGGGAAAAGGCATCCAGCAAAACTTCAT CCTGACATTGCTTATTTTGTGCGGCCACTGCCCATGGACCTAAATGCTTTTCTATGCAAG GAAAACCAACTGAGGGGAATGTTTGAGTATGCTAGAAGGTGCACTTTCAAAGATCATCTT CAGAAGCTTGAGCACAACGATGATAGTGAAGAGCACACTGATAAGAACCTTCTGATAGCC CAGAGCCTCGCGTCAAAAATACTCAGCAATGCCAACTTCCACTTGGTTTCAATGGATATG CCAGTGACCTTCAGCATTGAGGATGCTTCTGGCTTATGCTGGCGATTCAGCAGTGAGATC CTGAGCACTTCAAACCCTTGCCTAATTACCATCCTCGCGGAAGGGCATATCTCGGAACCA CTTGACCTCACTGCTAAGGTGAACTCTGAAGATACAGCGTTTGGCCTAAACCTCCTAAAC AGAGTTGTAGCAATCATAGAATGA

Peptide Sequence

PEP ID	Os01t0973300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42971420:42976876:1 gene:Os01g0973300 transcript:Os01t0973300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os01t0973300-01)
Sequence	HDLLPDETTSLEDTVDVLFSDNSPGVVGATAVAFNSVCPNCLPLISKHFQRLCETLPDIE EWAQILLIDIILRYVIARHGLVKDSSIFASNLTLKSQGSGDSALIGNETCGTTSTITLFR HYIEEYSECLEGDIINCSSVTSSTNNDVALLLKCTSPLLWSRNSGVILAAASVHWIMAPV DQLNRVVGPILFTLRSSPDATYVMLGNILVFAKTAPQLFAPFYEDFFICTSDPYQTKALK LEILTTIATESSIPAIFEEFQDYIKEPDRRFVADTVAAIALCAQKLPSITTSCLGGLLAL VFYESSISDSANFDGEAAVLVQAILSIKAIVRTDPASHEKVIVRLVHSLDKIKEPAARSL IIWIFGEYSSIGNIIPKITPAVLKYLAWSFAAEMLETKLQILNAAAKVIIHSPEEHLEEF KKIMAHVIKLATCDLSYDVRDRARFISRLLPYSTTYLNGNNSSCQSHNEDMFKELANHIF DGKMPSTFHPTNNYRIYLPGSLSQVILHAAPGYAPLPKPQSMELIHKTMEPTRGVGNSSE SINSDAESGSSTYDGGSVYDSESEVDGSSDRNAADSNTKDNQEDPLVHVYDASVDQGQTA RDVEDNFASLITTDLTELMSKSALETWLDEAPAEPVQVSTQASSARVSFTNRSFERKPKL HMLLDPSNSNGLSVLYAFSSEVSPVSRLLVCVDLLFENVSTNQLADITIKSEEASGSEDG LDQTLQGSASVPTIVLDKEIQLLAPEQTEKMVLQVHFHHHLLPLKLSVLCNGKRHPAKLH PDIAYFVRPLPMDLNAFLCKENQLRGMFEYARRCTFKDHLQKLEHNDDSEEHTDKNLLIA QSLASKILSNANFHLVSMDMPVTFSIEDASGLCWRFSSEILSTSNPCLITILAEGHISEP LDLTAKVNSEDTAFGLNLLNRVVAIIE

Transcript Sequence

Transcript ID	Os01t0973300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42971420:42976876:1 gene:Os01g0973300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os01t0973300-01)
Sequence	GCACGACTTACTTCCAGATGAAACTACATCTTTGGAGGACACGGTAGATGTTTTGTTCAG TGACAATTCCCCGGGAGTAGTGGGAGCTACTGCTGTTGCCTTTAACTCAGTTTGCCCAAA TTGTTTACCCTTGATATCAAAGCATTTCCAAAGGCTATGTGAGACACTCCCAGATATTGA AGAATGGGCTCAGATTCTTCTAATCGATATCATCTTGCGATATGTAATAGCTAGACATGG ATTGGTGAAGGATTCTTCAATTTTTGCTTCAAATTTGACTTTGAAGAGCCAGGGCAGTGG AGATTCAGCCCTTATTGGCAATGAAACTTGTGGCACTACATCAACCATCACATTGTTCCG ACATTACATTGAAGAATATTCGGAATGTTTAGAAGGTGACATAATCAACTGTTCATCCGT GACCAGTAGCACAAACAATGATGTTGCACTACTTTTGAAATGTACATCGCCTCTTCTGTG GAGCCGAAACAGTGGAGTCATACTTGCAGCAGCAAGTGTTCATTGGATCATGGCTCCAGT TGACCAACTGAATAGAGTTGTTGGGCCAATTTTATTTACTCTACGCTCATCTCCTGATGC AACATATGTGATGCTTGGCAACATACTAGTTTTTGCCAAGACAGCCCCACAATTGTTTGC TCCGTTCTATGAAGATTTCTTCATATGCACTTCAGATCCATATCAAACTAAGGCTTTGAA GCTTGAAATACTGACCACCATAGCCACAGAGTCCTCTATTCCAGCAATTTTTGAAGAATT TCAGGATTATATTAAAGAACCGGATAGGAGATTTGTGGCAGATACAGTTGCTGCTATTGC GCTGTGTGCCCAGAAGCTTCCCTCTATCACTACCAGTTGCCTTGGTGGGCTTTTGGCACT AGTATTTTATGAATCATCTATAAGTGATTCTGCTAACTTTGATGGAGAAGCTGCTGTTTT AGTTCAAGCAATTTTGTCTATCAAAGCAATAGTGAGAACAGATCCAGCATCTCATGAAAA GGTGATTGTACGCTTGGTCCACAGCCTGGACAAAATTAAGGAGCCTGCAGCACGATCCCT GATTATTTGGATATTTGGAGAGTATAGTTCCATAGGAAATATCATTCCAAAGATAACTCC TGCTGTTCTCAAGTATCTTGCATGGTCCTTTGCTGCTGAAATGCTTGAGACAAAGCTTCA GATCTTAAATGCTGCTGCAAAGGTTATCATACATTCTCCTGAAGAACACTTAGAAGAATT CAAAAAGATAATGGCCCATGTCATTAAGCTGGCTACATGTGATTTGAGTTATGACGTCCG TGATCGTGCCCGTTTTATATCAAGACTTTTGCCATACAGCACAACCTATTTAAATGGAAA CAACTCCTCATGTCAATCACATAATGAAGATATGTTTAAGGAACTGGCTAATCATATATT TGATGGGAAGATGCCATCAACATTCCATCCAACCAATAACTACCGGATTTATCTTCCTGG TTCCTTGTCACAGGTGATTCTTCATGCAGCTCCTGGTTACGCACCACTTCCAAAGCCTCA GAGTATGGAATTAATTCATAAGACCATGGAACCAACCAGAGGAGTAGGCAATTCTTCTGA AAGCATTAATTCTGATGCTGAATCTGGATCTTCAACATATGATGGTGGTTCTGTTTATGA TTCAGAGAGTGAAGTTGATGGCTCATCTGACAGGAATGCTGCTGATTCTAACACAAAAGA TAATCAAGAAGATCCCCTGGTCCATGTTTATGATGCAAGTGTAGATCAAGGTCAGACGGC TAGGGATGTCGAGGATAATTTTGCATCTCTCATCACTACTGATTTGACTGAATTAATGTC TAAGTCAGCCTTGGAAACATGGCTTGATGAAGCTCCTGCTGAACCAGTTCAGGTTTCTAC ACAAGCATCCTCTGCTAGAGTGTCTTTTACCAATCGGAGCTTTGAGCGAAAACCTAAATT GCACATGTTGTTAGACCCATCTAATAGTAATGGTCTAAGTGTTCTTTATGCCTTTTCATC TGAGGTTTCACCCGTATCACGCTTGCTAGTGTGTGTAGACTTGTTATTTGAGAATGTTTC AACAAACCAACTGGCAGATATAACAATTAAATCCGAGGAGGCTTCTGGTAGTGAGGATGG CTTGGACCAAACATTACAAGGATCTGCAAGTGTTCCAACTATTGTTCTTGATAAAGAGAT ACAATTATTGGCTCCCGAACAAACGGAAAAGATGGTTCTTCAGGTTCACTTCCATCACCA TCTATTGCCCCTTAAGTTGTCTGTGCTCTGCAATGGGAAAAGGCATCCAGCAAAACTTCA TCCTGACATTGCTTATTTTGTGCGGCCACTGCCCATGGACCTAAATGCTTTTCTATGCAA GGAAAACCAACTGAGGGGAATGTTTGAGTATGCTAGAAGGTGCACTTTCAAAGATCATCT TCAGAAGCTTGAGCACAACGATGATAGTGAAGAGCACACTGATAAGAACCTTCTGATAGC CCAGAGCCTCGCGTCAAAAATACTCAGCAATGCCAACTTCCACTTGGTTTCAATGGATAT GCCAGTGACCTTCAGCATTGAGGATGCTTCTGGCTTATGCTGGCGATTCAGCAGTGAGAT CCTGAGCACTTCAAACCCTTGCCTAATTACCATCCTCGCGGAAGGGCATATCTCGGAACC ACTTGACCTCACTGCTAAGGTGAACTCTGAAGATACAGCGTTTGGCCTAAACCTCCTAAA CAGAGTTGTAGCAATCATAGAATGAAGCTTTACGTTTTAACACCTGTGCATTTAGTCTTA AATGTCACTTTGTGGATACTGTAAATTGTTGTACATTATTTGCAAGCTATGAAGGTTTTA TAGTAAAGGTATCCAGCAAATGAATTGAAATGTT