Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0973100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:42960110:42964990:1 gene:Os01g0973100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0973100-01)
Sequence

ATGGCAGGTGGAGCGTGGTTGCAGTTGCAGGTGGCGCTCCTCCTCCTGGTGGCTCTCATC
TTCTCAACCTTGTCGCCATCGGAAGCAGAAGCAGAAGCAGCTGCGGCTACTTCTACTAAT
TTGCGGCGTCGGCAGGAGGTGCAGAGCCTCCTCAGGCGCCTCAACAAGCCTCCTCTCGCA
ACCATTCAGAGCCCAGATGGAGATATCATAGACTGTGTGCATATCTCCAAACAGCCTGCG
TTCGATCATCCTCTCCTCAAGAACCACACAATCCAGATGCGGCCTTCTATCCAGCCAAGT
GGCATGTATGGTGAAGCGGCACGTCCATTCACCCAAACATGGAATCAAAATGGCGAAAAG
TGTCCCGACAACACCGTACCAATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACC
TCTGTTGCAACGTTTGGCAAGAAGACGCACGGGAGCCATCACCCTCGCTTGGCTGGTGTC
ACAGATGGCCACCACTATGGTGTAGCATCTGCAACTGGGGATGCTAACTACTACGGAACC
AAAGCGACAATCAATTTGTGGCAACCAACGATTGCAACATCTGGTGATTTCAGTCTGGCC
CAGCTATGGATCTCAGCGGGCTCCTATCAAAACAAGGACCTTAATACCATTGAAGCAGGA
TGGCAGGACCTAGCGGGTGGTAATTGGTGGTTGCAAGTGCAAGGCAAATATGTGGGTTAC
TGGCCATCGTCCATCTTCACCCACTTGCAGACAGGCGTTGCTGACACTGTGGAATGGGGC
GGGGAGGTGAATTCGCCTCGAAGTACCACACCCATGGGCAGTGGACATTTCCCTAAAGAA
GGATTCGGCAAGGCCACCTACAGCAAAGCAATCCAAGTTGTTGATTCCTCCAACAAACTT
AAATCACCAAATGGTGTGAGCTTGATAGCTCCGCTACCCAATTACTATAACGTCATGACT
GGTTCCTCTAGTACCACAAGCTGGGGCACTTACATCTACTATGGCGGATCTGGATGCCCT
TGA

Peptide Sequence

PEP ID

Os01t0973100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:42960110:42964990:1 gene:Os01g0973100 transcript:Os01t0973100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0973100-01)
Sequence

MAGGAWLQLQVALLLLVALIFSTLSPSEAEAEAAAATSTNLRRRQEVQSLLRRLNKPPLA
TIQSPDGDIIDCVHISKQPAFDHPLLKNHTIQMRPSIQPSGMYGEAARPFTQTWNQNGEK
CPDNTVPIRRTKEEDVMRATSVATFGKKTHGSHHPRLAGVTDGHHYGVASATGDANYYGT
KATINLWQPTIATSGDFSLAQLWISAGSYQNKDLNTIEAGWQDLAGGNWWLQVQGKYVGY
WPSSIFTHLQTGVADTVEWGGEVNSPRSTTPMGSGHFPKEGFGKATYSKAIQVVDSSNKL
KSPNGVSLIAPLPNYYNVMTGSSSTTSWGTYIYYGGSGCP

Transcript Sequence

Transcript ID

Os01t0973100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42960110:42964990:1 gene:Os01g0973100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0973100-01)
Sequence

GATGGAAGAAGCATCAAGCTAGCAGTCGATCGATCAATGGCAGGTGGAGCGTGGTTGCAG
TTGCAGGTGGCGCTCCTCCTCCTGGTGGCTCTCATCTTCTCAACCTTGTCGCCATCGGAA
GCAGAAGCAGAAGCAGCTGCGGCTACTTCTACTAATTTGCGGCGTCGGCAGGAGGTGCAG
AGCCTCCTCAGGCGCCTCAACAAGCCTCCTCTCGCAACCATTCAGAGCCCAGATGGAGAT
ATCATAGACTGTGTGCATATCTCCAAACAGCCTGCGTTCGATCATCCTCTCCTCAAGAAC
CACACAATCCAGATGCGGCCTTCTATCCAGCCAAGTGGCATGTATGGTGAAGCGGCACGT
CCATTCACCCAAACATGGAATCAAAATGGCGAAAAGTGTCCCGACAACACCGTACCAATC
CGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTGTTGCAACGTTTGGCAAGAAG
ACGCACGGGAGCCATCACCCTCGCTTGGCTGGTGTCACAGATGGCCACCACTATGGTGTA
GCATCTGCAACTGGGGATGCTAACTACTACGGAACCAAAGCGACAATCAATTTGTGGCAA
CCAACGATTGCAACATCTGGTGATTTCAGTCTGGCCCAGCTATGGATCTCAGCGGGCTCC
TATCAAAACAAGGACCTTAATACCATTGAAGCAGGATGGCAGGACCTAGCGGGTGGTAAT
TGGTGGTTGCAAGTGCAAGGCAAATATGTGGGTTACTGGCCATCGTCCATCTTCACCCAC
TTGCAGACAGGCGTTGCTGACACTGTGGAATGGGGCGGGGAGGTGAATTCGCCTCGAAGT
ACCACACCCATGGGCAGTGGACATTTCCCTAAAGAAGGATTCGGCAAGGCCACCTACAGC
AAAGCAATCCAAGTTGTTGATTCCTCCAACAAACTTAAATCACCAAATGGTGTGAGCTTG
ATAGCTCCGCTACCCAATTACTATAACGTCATGACTGGTTCCTCTAGTACCACAAGCTGG
GGCACTTACATCTACTATGGCGGATCTGGATGCCCTTGAAACTCTGAAATTGAAGTGATA
TATAGAGAGAGATCGAGCTCCCCATCAAACTACATTCATCTCCTTAATAATTTATGTGTA
CTACTACACGATCAACATGCATGTCGCTCTCGTTTATGCATTATGCATTACTAGTGTAAT
AAAGTATTGCTAGCTAGGGTCTATACTAGCTGATAGTACATGCATGTCACATTTCAAGCG
ATTACTAGTACCTATGTATACATTTGCATCCATTGGTAAGAGGTTTGAACTAAGCTAGCA
TTACAAGTTGGCAATAAATGTAGAGAGAATATATTCTATACC