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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0972300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:42917737:42918706:-1 gene:Os01g0972300 gene_biotype:protein_coding transcript_biotype:protein_coding description:DVL family protein. (Os01t0972300-01)
Sequence

ATGGAGGACGAGAGGTGGAAGCTGTCGAGCAGCAAGGGGAGGAGCAAATCGGGCAGATCC
TGCAGCAGCAGCAGCAACTACTACTACCACTCCTCCGATTTCAACAGCAGCAACGCCACC
ACGCTCAGCCGGAGCTACTCCGCCAGCGTCACCGCCAGCAGGCACGCTACCACCGCTTGG
TCCGCCGCCGGCGCCGGTGGTGGTGGCGCCAGCAGCAGCAGCAGCTCGCAGCATCAGCAT
CAGCAGCAGCAGCAGCAGAGCAACAATTCGCAGCGGCTGTCGAAGAAGTGCGTGGAGGCG
GTGAAGGAGCATCGCGCGAGGTTCTACATCGTCCGCCGCTGCGTCTCCATGCTCGTCTGC
TGGCGAGACTACTAG

Peptide Sequence

PEP ID

Os01t0972300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:42917737:42918706:-1 gene:Os01g0972300 transcript:Os01t0972300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DVL family protein. (Os01t0972300-01)
Sequence

MEDERWKLSSSKGRSKSGRSCSSSSNYYYHSSDFNSSNATTLSRSYSASVTASRHATTAW
SAAGAGGGGASSSSSSQHQHQQQQQQSNNSQRLSKKCVEAVKEHRARFYIVRRCVSMLVC
WRDY

Transcript Sequence

Transcript ID

Os01t0972300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42917737:42918706:-1 gene:Os01g0972300 gene_biotype:protein_coding transcript_biotype:protein_coding description:DVL family protein. (Os01t0972300-01)
Sequence

ATTGTTATTATTCTCAGGCTCATCAGCTGGATGTCCCTAGCTCTTGCTCTTCTTCTTCTT
CTTCTTCCTAGTCCCCAGTTCATTCTCGATCTGCCAACTTCATTCTCCCGTCTATAAATC
CATCCACAGCTAGCCACCCACTCTCTACTGGAGTAGTTGTAATTGTTTAGAGCGTGTGGT
CGAATTAATATCCATGGAGGACGAGAGGTGGAAGCTGTCGAGCAGCAAGGGGAGGAGCAA
ATCGGGCAGATCCTGCAGCAGCAGCAGCAACTACTACTACCACTCCTCCGATTTCAACAG
CAGCAACGCCACCACGCTCAGCCGGAGCTACTCCGCCAGCGTCACCGCCAGCAGGCACGC
TACCACCGCTTGGTCCGCCGCCGGCGCCGGTGGTGGTGGCGCCAGCAGCAGCAGCAGCTC
GCAGCATCAGCATCAGCAGCAGCAGCAGCAGAGCAACAATTCGCAGCGGCTGTCGAAGAA
GTGCGTGGAGGCGGTGAAGGAGCATCGCGCGAGGTTCTACATCGTCCGCCGCTGCGTCTC
CATGCTCGTCTGCTGGCGAGACTACTAGCTCAGTCTCCTCTTCCTTCTTCTTTTTCTTCT
TCTTCTAGCTCAGTTTGATTCAATTTTATTTATTTGTTTCCCTTCCATAATACTCCATTG
CTAGCTCCATGCATCATCATCATCATCATCATCGATCTCTGTGTGTTTCTGCCTGCATCT
TAATTTGTTCTTTCTGTAATTAATCTTGCATTGCTCTCTCTACAAGTATATACTTACTAG
CTAGTAGCTAGCATTCTCATCTTCTTACTATCTATTTAGTTCCTTCCTAGCTACCTAGTC
GATCAGCTAGTCCAAGTATGTAATGTATATAAAGGTGAGGTGAGCTAGTCGTCCGGGAAT
GTTGATTTTGGAGCTAGCCGATGAATTGTGCTTGCTGATTTCTGTTAAATATTTATGAAA
TGCCAATGGT