Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0972000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42884953:42886230:1 gene:Os01g0972000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-3, RING-H2 protein 3 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0972000-01)
Sequence	ATGGACGACGACGCCTCCTCCTACACCTACTGTTGCCACAGCTGCGACAGCTTCGTCCAC CCGCACCCCCACCTCGACGCCGCTGTGCTCTGTCCCCACTGCAACGCCGCCGGCTTCCTT CACGACCACGAGATGCCTCCCGCCGCCGACCACTCCCCGTTCAACCCCCCCGTCATCGTC CTCCGCCGCTCCGCATCCCCCGACGACGCCACCACCTTCGATCTCCTCTACGACGACGGC GCCTCCTCCGCCCTCCGCCCCCTCTTCGACCGCCTCCTCCTCCGCATCCCCTCCGCCTCC GACAACCCCAACCCCCCGGCCTCCAAAGCCGCCGTCGACTCCATGCCCACCATCCTCATC GGGGCCTGCCACCTCGCCGCCGACTCCCACTGCGCCGTCTGCAAGGAACCCTTCCACCTC GCCGCCGAGGCCAGGGAGATGCCCTGCGCCCACATCTACCACCACAATTGCATCCTCCCC TGGCTCGCTCTCCACAACTCATGCCCCGTCTGCCGCCACCGCATGCCCACCGATGACCAC GACTCGACCAATGCTGCTGCTGCTCAGGCTGCCGCCGGAAGCAGCGACGAGGACGCCACC ACCGTGGGTACTCTCACCATTTGGAGGCTTCCCGGTGGGGGATATGCGGTTGGGAGGTTT GCTGCTGCTGGTGGGACAAGAGCCGGTGAGAGGGAGCTCCCGGTTCTCTACACCCAGATG GATGATGGCGGCTTCAACGGCGGCGGCGGCTCGGGCTCGCCGACGATGATCGGGTGGTCA TCTAGAGGGAGTCGTTCGTCCCAGAGACAGAGAAGCATCATCCCACGCTTGTTTCGCAAC ATGTTTGCATGCTTTAGGCATCATGATGCAACTGCAGATTCAGGAGATTATTCCTCACGG GCTGGGAGGAGATCCTCCTCCTCTGTCTTCACCCGCAGCCTGAGGAGCCAGATCACGAGC TGGAGATCGGAAGATGGCCACCCCGATGCCATTGCTACTAGATGA

Peptide Sequence

PEP ID	Os01t0972000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42884953:42886230:1 gene:Os01g0972000 transcript:Os01t0972000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-3, RING-H2 protein 3 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0972000-01)
Sequence	MDDDASSYTYCCHSCDSFVHPHPHLDAAVLCPHCNAAGFLHDHEMPPAADHSPFNPPVIV LRRSASPDDATTFDLLYDDGASSALRPLFDRLLLRIPSASDNPNPPASKAAVDSMPTILI GACHLAADSHCAVCKEPFHLAAEAREMPCAHIYHHNCILPWLALHNSCPVCRHRMPTDDH DSTNAAAAQAAAGSSDEDATTVGTLTIWRLPGGGYAVGRFAAAGGTRAGERELPVLYTQM DDGGFNGGGGSGSPTMIGWSSRGSRSSQRQRSIIPRLFRNMFACFRHHDATADSGDYSSR AGRRSSSSVFTRSLRSQITSWRSEDGHPDAIATR

Transcript Sequence

Transcript ID	Os01t0972000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42884953:42886230:1 gene:Os01g0972000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-3, RING-H2 protein 3 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0972000-01)
Sequence	ACATCTCTCACATCTCTCTCCTCCACTCCGCTCCCGTCGCCGCCACATCGCCATGGACGA CGACGCCTCCTCCTACACCTACTGTTGCCACAGCTGCGACAGCTTCGTCCACCCGCACCC CCACCTCGACGCCGCTGTGCTCTGTCCCCACTGCAACGCCGCCGGCTTCCTTCACGACCA CGAGATGCCTCCCGCCGCCGACCACTCCCCGTTCAACCCCCCCGTCATCGTCCTCCGCCG CTCCGCATCCCCCGACGACGCCACCACCTTCGATCTCCTCTACGACGACGGCGCCTCCTC CGCCCTCCGCCCCCTCTTCGACCGCCTCCTCCTCCGCATCCCCTCCGCCTCCGACAACCC CAACCCCCCGGCCTCCAAAGCCGCCGTCGACTCCATGCCCACCATCCTCATCGGGGCCTG CCACCTCGCCGCCGACTCCCACTGCGCCGTCTGCAAGGAACCCTTCCACCTCGCCGCCGA GGCCAGGGAGATGCCCTGCGCCCACATCTACCACCACAATTGCATCCTCCCCTGGCTCGC TCTCCACAACTCATGCCCCGTCTGCCGCCACCGCATGCCCACCGATGACCACGACTCGAC CAATGCTGCTGCTGCTCAGGCTGCCGCCGGAAGCAGCGACGAGGACGCCACCACCGTGGG TACTCTCACCATTTGGAGGCTTCCCGGTGGGGGATATGCGGTTGGGAGGTTTGCTGCTGC TGGTGGGACAAGAGCCGGTGAGAGGGAGCTCCCGGTTCTCTACACCCAGATGGATGATGG CGGCTTCAACGGCGGCGGCGGCTCGGGCTCGCCGACGATGATCGGGTGGTCATCTAGAGG GAGTCGTTCGTCCCAGAGACAGAGAAGCATCATCCCACGCTTGTTTCGCAACATGTTTGC ATGCTTTAGGCATCATGATGCAACTGCAGATTCAGGAGATTATTCCTCACGGGCTGGGAG GAGATCCTCCTCCTCTGTCTTCACCCGCAGCCTGAGGAGCCAGATCACGAGCTGGAGATC GGAAGATGGCCACCCCGATGCCATTGCTACTAGATGATAATGGTGGTATGATTTGGAAAT TGATCATCACCTGCATCTTTTTGCTACCTTTTGCTTGATGATTTTGTGTAAGTAGTAGAT AATATCAAGAAAGATATGATGAGTATTATTGTTTGTAGGCATAGCAAAATTGCTGCTTAA TTTGTACATATAGCAGATTGTTCAGGTAACAATGTAACATTACAATTCAAATATCATATA TCTTTGGTTTGCCTATTC